Detailed information NTG0550929

Bioinformatically predicted

Overview

• Name: rarA
• Type: Machinery gene
• Locus tag: LUZ08_RS02425
• Genome accession: NZ_CP089489
• Coordinates: 428496..429770 (-)
• Length: 424 a.a.
• NCBI ID: WP_000102735.1
• Uniprot ID: -
• Organism: Staphylococcus aureus strain E1174_IV_ST22
• Function: homologous recombination (predicted from homology) Homologous recombination

Genomic Context

Location: 423496..434770

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
LUZ08_RS02400	hisS	424057..425319 (+)	1263	WP_000590826.1	histidine--tRNA ligase	-
LUZ08_RS02405	aspS	425335..427101 (+)	1767	WP_000044799.1	aspartate--tRNA ligase	-
LUZ08_RS02415	-	427434..427562 (+)	129	WP_001790559.1	hypothetical protein	-
LUZ08_RS02420	-	427562..428335 (+)	774	WP_000682646.1	ThiF family adenylyltransferase	-
LUZ08_RS02425	rarA	428496..429770 (-)	1275	WP_000102735.1	replication-associated recombination protein A	Machinery gene
LUZ08_RS02430	cymR	429855..430277 (+)	423	WP_000704122.1	cysteine metabolism transcriptional regulator CymR	-
LUZ08_RS02435	-	430377..430559 (+)	183	WP_134944044.1	CsbD family protein	-
LUZ08_RS02440	-	430599..430745 (+)	147	WP_000009238.1	SAS049 family protein	-
LUZ08_RS02445	-	430982..431995 (-)	1014	WP_000985886.1	LLM class flavin-dependent oxidoreductase	-
LUZ08_RS02450	-	432307..433449 (+)	1143	WP_000409167.1	cysteine desulfurase family protein	-
LUZ08_RS02455	mnmA	433450..434568 (+)	1119	WP_000066097.1	tRNA 2-thiouridine(34) synthase MnmA	-

Sequence

Protein

• Length: 424 a.a.
• Molecular weight: 47250.81 Da
• Isoelectric Point: 8.3539

>NTDB_id=550929 LUZ08_RS02425 WP_000102735.1 428496..429770(-) (rarA) [Staphylococcus aureus strain E1174_IV_ST22]
MSTEPLASRMRPKNIDEIISQQHLVGPRGIIRRMVDTKKLTSMIFYGPPGIGKTSIAKAISGSTQYKFRQLNAVTNTKKD
MQLVVEEAKMSGQVILLLDEIHRLDKAKQDFLLPHLENGKIVLIGATTSNPYHAINPAIRSRAQIFELYPLNDEDVRQAL
TRAIEDDENGLKTYQPKIDEDAMTYFSTQSQGDVRSALNALELAVLSADNDKDGYRHVTLQDAKDCLQKGAFVSDKDGDM
HYDVMSAFQKSIRGSDVNAALHYLARLIEAGDLPTIVRRLLVISYEDIGLASPNAGQRTLAAIESAERLGLPEARIPLSQ
AVIELCLSPKSNSAMSAIDSALSDIRNGHVGQIPNHLKDGHYQGAKDLGRSIGYKYPHQYVNGYVSQQYLPDKLKNKIYY
EPKTTSKSEQQLKEIYNNLLKQRP

Nucleotide

• Length: 1275 bp

>NTDB_id=550929 LUZ08_RS02425 WP_000102735.1 428496..429770(-) (rarA) [Staphylococcus aureus strain E1174_IV_ST22]
GTGAGTACAGAACCATTAGCATCGAGAATGCGCCCAAAAAATATAGATGAAATCATTTCCCAACAACATTTAGTTGGACC
AAGAGGCATTATCAGAAGAATGGTTGATACAAAAAAATTAACTTCAATGATTTTTTATGGTCCACCTGGTATAGGCAAAA
CAAGTATTGCCAAAGCAATTTCGGGCAGTACGCAATATAAATTCAGACAATTGAATGCTGTAACTAACACTAAAAAAGAT
ATGCAACTTGTTGTTGAAGAAGCTAAAATGTCTGGTCAAGTTATCTTGTTATTAGATGAAATACATCGACTAGATAAAGC
TAAACAAGACTTTTTATTACCTCATTTAGAAAATGGCAAAATCGTCTTGATCGGTGCTACAACTTCAAATCCTTATCATG
CTATCAATCCAGCGATTCGTTCAAGAGCGCAAATTTTCGAGTTATATCCTTTAAATGACGAAGATGTGCGCCAAGCGTTA
ACTCGTGCAATAGAAGATGATGAGAATGGTTTGAAAACATATCAACCCAAAATTGATGAAGATGCCATGACCTACTTTTC
TACACAAAGCCAAGGTGATGTTCGTAGTGCGTTAAATGCATTGGAATTAGCTGTATTAAGCGCAGATAATGACAAAGACG
GTTATCGACATGTTACATTGCAAGATGCTAAAGACTGTTTACAAAAAGGTGCATTTGTAAGTGACAAGGATGGTGACATG
CATTACGATGTTATGAGCGCTTTCCAAAAATCTATCCGTGGTAGCGACGTCAATGCCGCTTTACATTATTTAGCACGATT
AATTGAAGCTGGAGATTTACCTACAATAGTTCGACGATTACTTGTAATTAGCTATGAGGATATAGGCTTAGCCTCACCTA
ATGCTGGTCAGAGAACACTTGCTGCTATTGAATCAGCAGAACGTCTAGGTTTACCAGAAGCTAGAATTCCACTAAGCCAA
GCAGTAATCGAACTATGCTTATCACCTAAGTCAAATTCAGCAATGAGTGCCATTGATAGTGCATTGTCCGATATTAGAAA
CGGTCATGTGGGCCAAATTCCAAACCATTTAAAAGATGGACATTATCAAGGTGCTAAAGATCTAGGCCGATCTATTGGTT
ACAAATATCCACACCAATATGTTAATGGCTATGTTTCACAGCAATATTTACCTGATAAACTAAAAAACAAAATTTATTAC
GAACCAAAAACGACATCTAAAAGTGAACAACAACTCAAAGAAATATATAACAACTTACTTAAACAAAGGCCGTAA

Domains

Predicted by InterProScan.

• AAA C-terminal domain (AAA_assoc_2) (175-253)

• ATPase family associated with various cellular activities (AAA) (AAA) (43-145)

• MgsA AAA+ ATPase C terminal (MgsA_C) (254-418)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
rarA	Bacillus subtilis subsp. subtilis str. 168	69.048	99.057	0.684