Detailed information    

insolico Bioinformatically predicted

Overview

Name   codY   Type   Regulator
Locus tag   ANG_RS03115 Genome accession   NZ_AP013072
Coordinates   617544..618332 (+) Length   262 a.a.
NCBI ID   WP_003035535.1    Uniprot ID   I0SFK2
Organism   Streptococcus anginosus subsp. whileyi MAS624     
Function   repress the expression of comX (predicted from homology)   
Competence regulation

Genomic Context

Location: 612544..623332
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  ANG_RS03095 (ANG_0623) - 613103..614065 (-) 963 WP_003035568.1 asparaginase -
  ANG_RS03100 (ANG_0624) - 614130..615518 (+) 1389 WP_003035466.1 Cof-type HAD-IIB family hydrolase -
  ANG_RS03105 (ANG_0625) - 615564..616016 (-) 453 WP_003028799.1 universal stress protein -
  ANG_RS03110 (ANG_0626) - 616168..617382 (+) 1215 WP_003035582.1 pyridoxal phosphate-dependent aminotransferase -
  ANG_RS03115 (ANG_0627) codY 617544..618332 (+) 789 WP_003035535.1 GTP-sensing pleiotropic transcriptional regulator CodY Regulator
  ANG_RS03120 (ANG_0628) - 618332..618907 (+) 576 WP_022527097.1 cysteine hydrolase family protein -
  ANG_RS03125 (ANG_0629) - 619212..620201 (+) 990 Protein_604 amino acid--tRNA ligase-related protein -
  ANG_RS03130 (ANG_0630) gatC 620278..620580 (+) 303 WP_003026120.1 Asp-tRNA(Asn)/Glu-tRNA(Gln) amidotransferase subunit GatC -
  ANG_RS03135 (ANG_0631) gatA 620580..622046 (+) 1467 WP_003035492.1 Asp-tRNA(Asn)/Glu-tRNA(Gln) amidotransferase subunit GatA -

Sequence

Protein


Download         Length: 262 a.a.        Molecular weight: 29724.06 Da        Isoelectric Point: 5.0797

>NTDB_id=55087 ANG_RS03115 WP_003035535.1 617544..618332(+) (codY) [Streptococcus anginosus subsp. whileyi MAS624]
MANLLAKTRKITSILRRSDERLQDELPYNAITQQLAEIMDCNACIVNSKGRLLGYFMRYKTNNDRVEAFYQTKIFPEEYV
RTANLMYDTEANLPVNHDLSIFPIETKDEFPDGLTTISPIHVSGIRLGTLIVWRNDKEFDDDDLILVEIASTVVGIQLLN
FQREEDEKNIRRRTAVTMAVNTLSYSELRAVSAILGELSGNEGQLTASVIADRIGITRSVIVNALRKLESAGIIESRSLG
MKGTYLKVLIPDIFEEIKKRDY

Nucleotide


Download         Length: 789 bp        

>NTDB_id=55087 ANG_RS03115 WP_003035535.1 617544..618332(+) (codY) [Streptococcus anginosus subsp. whileyi MAS624]
ATGGCAAACTTATTAGCAAAAACAAGAAAAATAACATCTATTTTGCGTCGTTCAGATGAGCGATTGCAGGATGAACTACC
TTATAATGCAATTACCCAACAATTAGCTGAAATTATGGATTGCAATGCTTGTATTGTAAATAGCAAGGGTCGTCTTTTGG
GGTATTTCATGCGCTACAAGACAAACAATGATCGTGTGGAAGCATTTTATCAAACGAAAATCTTCCCAGAAGAGTATGTT
CGCACCGCAAATTTGATGTATGATACTGAGGCCAATCTTCCAGTCAATCATGATTTATCTATTTTTCCTATTGAGACAAA
AGATGAATTTCCAGATGGCTTGACGACAATTTCACCAATTCATGTTTCTGGGATTCGTTTAGGGACATTGATTGTTTGGC
GCAATGATAAAGAATTTGACGATGATGATTTGATCTTGGTTGAAATTGCAAGTACAGTGGTTGGTATTCAGCTACTCAAC
TTCCAACGAGAAGAAGATGAAAAAAATATTCGACGTCGAACAGCCGTAACTATGGCTGTAAATACTTTGTCTTATTCAGA
ACTACGAGCTGTTTCTGCTATTTTAGGTGAATTAAGTGGCAATGAAGGACAGCTAACAGCTTCAGTGATTGCAGATCGTA
TTGGCATTACGCGCTCAGTGATTGTCAATGCTCTACGTAAACTAGAAAGTGCAGGCATTATCGAAAGTCGTTCTCTAGGA
ATGAAAGGAACCTATCTTAAAGTTCTTATCCCCGATATCTTTGAAGAGATTAAAAAGCGAGATTACTGA

Domains

Predicted by InterProScan.

CodY helix-turn-helix domain (HTH_CodY)

(202-258)

CodY GAF-like domain (CodY)

(3-182)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure
  AlphaFold DB I0SFK2

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  codY Lactococcus lactis subsp. lactis strain DGCC12653

61.832

100

0.618
  codY Bacillus subtilis subsp. subtilis str. 168

50

93.893

0.469

Multiple sequence alignment