Detailed information    

insolico Bioinformatically predicted

Overview

Name   rcrR   Type   Regulator
Locus tag   ANG_RS03020 Genome accession   NZ_AP013072
Coordinates   593855..594313 (+) Length   152 a.a.
NCBI ID   WP_003035559.1    Uniprot ID   I0SFL8
Organism   Streptococcus anginosus subsp. whileyi MAS624     
Function   regulate competence (predicted from homology)   
Competence regulation

Genomic Context

Location: 588855..599313
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  ANG_RS03005 (ANG_0604) - 590148..592046 (+) 1899 WP_025271650.1 sucrose-specific PTS transporter subunit IIBC -
  ANG_RS03010 (ANG_0605) scrK 592322..593221 (+) 900 WP_020999796.1 fructokinase ScrK -
  ANG_RS03015 (ANG_0606) - 593289..593699 (+) 411 WP_003035443.1 peptide deformylase -
  ANG_RS03020 (ANG_0607) rcrR 593855..594313 (+) 459 WP_003035559.1 MarR family winged helix-turn-helix transcriptional regulator Regulator
  ANG_RS03025 (ANG_0608) rcrP 594306..596072 (+) 1767 WP_025271651.1 ABC transporter ATP-binding protein Regulator
  ANG_RS03030 (ANG_0609) rcrQ 596062..597822 (+) 1761 WP_003035495.1 ABC transporter ATP-binding protein Regulator
  ANG_RS03035 (ANG_0610) - 598032..598346 (+) 315 WP_025271652.1 PTS cellobiose transporter subunit IIB -
  ANG_RS03040 (ANG_0611) - 598357..598677 (+) 321 WP_003035457.1 PTS cellobiose transporter subunit IIA -

Sequence

Protein


Download         Length: 152 a.a.        Molecular weight: 17877.88 Da        Isoelectric Point: 7.8790

>NTDB_id=55083 ANG_RS03020 WP_003035559.1 593855..594313(+) (rcrR) [Streptococcus anginosus subsp. whileyi MAS624]
MEKPLLEFKRFGRKTHLMIQKIAKERGIEFMAGPQGQVLHFVNHREDCDKMTFIKDIEQELGITKSVASNLMKRMVKNGL
IYLEVSEADKRAKIIRLTPESKERMNKIRDFFDEMDRCLLTDISEEDLVTFFQVMGKFYQNIEKLEKGEANV

Nucleotide


Download         Length: 459 bp        

>NTDB_id=55083 ANG_RS03020 WP_003035559.1 593855..594313(+) (rcrR) [Streptococcus anginosus subsp. whileyi MAS624]
ATGGAAAAACCATTATTAGAATTCAAGCGATTTGGACGGAAGACACATCTGATGATTCAAAAAATTGCCAAAGAGCGAGG
GATTGAATTTATGGCGGGTCCACAAGGGCAAGTATTGCATTTTGTGAATCACCGCGAAGACTGTGATAAGATGACCTTTA
TTAAAGATATTGAGCAGGAGTTGGGCATTACTAAGTCCGTTGCCAGTAATTTAATGAAGCGAATGGTGAAGAATGGCTTG
ATTTATCTGGAAGTGAGTGAAGCAGATAAACGCGCTAAGATTATTCGTTTAACGCCGGAATCAAAAGAGCGCATGAATAA
AATTCGTGATTTTTTTGATGAAATGGATCGTTGCCTATTGACAGATATTTCAGAAGAAGATTTGGTTACTTTTTTTCAAG
TGATGGGGAAATTTTACCAGAATATTGAAAAATTAGAAAAAGGAGAAGCGAATGTTTAA

Domains

Predicted by InterProScan.

MarR family (MarR_2)

(33-92)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure
  AlphaFold DB I0SFL8

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  rcrR Streptococcus mutans UA159

43.836

96.053

0.421

Multiple sequence alignment