Detailed information NTG0550508

Bioinformatically predicted

Overview

• Name: rarA
• Type: Machinery gene
• Locus tag: LUY99_RS02755
• Genome accession: NZ_CP089479
• Coordinates: 577381..578655 (+)
• Length: 424 a.a.
• NCBI ID: WP_000102735.1
• Uniprot ID: -
• Organism: Staphylococcus aureus strain 0073_III_ST239
• Function: homologous recombination (predicted from homology) Homologous recombination

Genomic Context

Location: 572381..583655

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
LUY99_RS02725	mnmA	572583..573701 (-)	1119	WP_000066097.1	tRNA 2-thiouridine(34) synthase MnmA	-
LUY99_RS02730	-	573702..574844 (-)	1143	WP_000409167.1	cysteine desulfurase family protein	-
LUY99_RS02735	-	575156..576169 (+)	1014	WP_000985886.1	LLM class flavin-dependent oxidoreductase	-
LUY99_RS02740	-	576406..576552 (-)	147	WP_000009238.1	SAS049 family protein	-
LUY99_RS02745	-	576592..576774 (-)	183	WP_000752913.1	CsbD family protein	-
LUY99_RS02750	cymR	576874..577296 (-)	423	WP_000704122.1	cysteine metabolism transcriptional regulator CymR	-
LUY99_RS02755	rarA	577381..578655 (+)	1275	WP_000102735.1	replication-associated recombination protein A	Machinery gene
LUY99_RS02760	-	578816..579589 (-)	774	WP_000682646.1	ThiF family adenylyltransferase	-
LUY99_RS02765	-	579589..579717 (-)	129	WP_001790559.1	hypothetical protein	-
LUY99_RS02775	aspS	580050..581816 (-)	1767	WP_000044799.1	aspartate--tRNA ligase	-
LUY99_RS02780	hisS	581832..583094 (-)	1263	WP_000590826.1	histidine--tRNA ligase	-

Sequence

Protein

• Length: 424 a.a.
• Molecular weight: 47250.81 Da
• Isoelectric Point: 8.3539

>NTDB_id=550508 LUY99_RS02755 WP_000102735.1 577381..578655(+) (rarA) [Staphylococcus aureus strain 0073_III_ST239]
MSTEPLASRMRPKNIDEIISQQHLVGPRGIIRRMVDTKKLTSMIFYGPPGIGKTSIAKAISGSTQYKFRQLNAVTNTKKD
MQLVVEEAKMSGQVILLLDEIHRLDKAKQDFLLPHLENGKIVLIGATTSNPYHAINPAIRSRAQIFELYPLNDEDVRQAL
TRAIEDDENGLKTYQPKIDEDAMTYFSTQSQGDVRSALNALELAVLSADNDKDGYRHVTLQDAKDCLQKGAFVSDKDGDM
HYDVMSAFQKSIRGSDVNAALHYLARLIEAGDLPTIVRRLLVISYEDIGLASPNAGQRTLAAIESAERLGLPEARIPLSQ
AVIELCLSPKSNSAMSAIDSALSDIRNGHVGQIPNHLKDGHYQGAKDLGRSIGYKYPHQYVNGYVSQQYLPDKLKNKIYY
EPKTTSKSEQQLKEIYNNLLKQRP

Nucleotide

• Length: 1275 bp

>NTDB_id=550508 LUY99_RS02755 WP_000102735.1 577381..578655(+) (rarA) [Staphylococcus aureus strain 0073_III_ST239]
GTGAGTACAGAACCATTAGCATCGAGAATGCGCCCAAAAAATATAGATGAAATCATTTCCCAACAACATTTAGTTGGACC
AAGAGGCATTATCAGAAGAATGGTTGATACAAAAAAATTAACTTCAATGATTTTTTATGGTCCACCTGGTATAGGCAAAA
CAAGTATTGCCAAAGCAATTTCGGGCAGTACGCAATATAAATTCAGACAATTGAATGCTGTAACTAACACTAAAAAAGAT
ATGCAACTTGTTGTTGAAGAAGCTAAAATGTCTGGTCAAGTTATCTTGTTATTAGATGAAATACATCGACTAGATAAAGC
TAAACAAGACTTTTTATTACCTCATTTAGAAAATGGCAAAATCGTCTTGATCGGTGCTACAACTTCAAATCCTTATCATG
CTATCAATCCAGCGATTCGTTCAAGAGCGCAAATTTTCGAGTTATATCCTTTAAATGACGAAGATGTGCGCCAAGCGTTA
ACTCGTGCAATAGAAGATGATGAGAATGGTTTGAAAACATATCAACCCAAAATTGATGAAGATGCCATGACCTACTTTTC
TACACAAAGCCAAGGTGATGTTCGTAGTGCGTTAAATGCATTGGAATTAGCTGTATTAAGCGCAGATAATGACAAAGACG
GTTATCGACATGTTACATTGCAAGATGCTAAAGACTGTTTACAAAAAGGTGCATTTGTAAGTGACAAGGATGGTGACATG
CATTACGATGTTATGAGCGCTTTCCAAAAATCTATCCGTGGTAGCGACGTCAATGCCGCTTTACATTATTTAGCACGATT
AATTGAAGCTGGAGATTTACCTACAATAGTTCGACGATTACTTGTAATTAGCTATGAGGATATAGGCTTAGCCTCACCTA
ATGCTGGTCAGAGAACACTTGCTGCTATTGAATCAGCAGAACGTCTAGGTTTACCAGAAGCTAGAATTCCACTAAGCCAA
GCAGTAATCGAACTATGCTTATCACCTAAGTCAAATTCAGCAATGAGTGCCATTGATAGTGCATTGTCCGATATTAGAAA
CGGTCATGTGGGCCAAATTCCAAACCATTTAAAAGATGGACATTATCAAGGTGCTAAAGATCTAGGCCGATCTATTGGTT
ACAAATATCCACACCAATATGTTAATGGCTATGTTTCACAGCAATATTTACCTGATAAACTAAAAAACAAAATTTATTAC
GAACCAAAAACGACATCTAAAAGTGAACAACAACTCAAAGAAATATATAACAACTTACTTAAACAAAGGCCGTAA

Domains

Predicted by InterProScan.

• AAA C-terminal domain (AAA_assoc_2) (175-253)

• ATPase family associated with various cellular activities (AAA) (AAA) (43-145)

• MgsA AAA+ ATPase C terminal (MgsA_C) (254-418)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
rarA	Bacillus subtilis subsp. subtilis str. 168	69.048	99.057	0.684