Detailed information NTG0550230

Bioinformatically predicted

Overview

• Name: rarA
• Type: Machinery gene
• Locus tag: LUY92_RS02000
• Genome accession: NZ_CP089473
• Coordinates: 367866..369140 (-)
• Length: 424 a.a.
• NCBI ID: WP_000102726.1
• Uniprot ID: -
• Organism: Staphylococcus aureus strain 0.1239_III_ST239
• Function: homologous recombination (predicted from homology) Homologous recombination

Genomic Context

Location: 362866..374140

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
LUY92_RS01975	hisS	363427..364689 (+)	1263	WP_000590826.1	histidine--tRNA ligase	-
LUY92_RS01980	aspS	364705..366471 (+)	1767	WP_000044799.1	aspartate--tRNA ligase	-
LUY92_RS01990	-	366804..366932 (+)	129	WP_001790559.1	hypothetical protein	-
LUY92_RS01995	-	366932..367705 (+)	774	WP_000682646.1	ThiF family adenylyltransferase	-
LUY92_RS02000	rarA	367866..369140 (-)	1275	WP_000102726.1	replication-associated recombination protein A	Machinery gene
LUY92_RS02005	cymR	369225..369647 (+)	423	WP_000704122.1	cysteine metabolism transcriptional regulator CymR	-
LUY92_RS02010	-	369747..369929 (+)	183	WP_000752909.1	CsbD family protein	-
LUY92_RS02015	-	369969..370115 (+)	147	WP_000009238.1	SAS049 family protein	-
LUY92_RS02020	-	370352..371365 (-)	1014	WP_000985878.1	LLM class flavin-dependent oxidoreductase	-
LUY92_RS02025	-	371677..372819 (+)	1143	WP_000409157.1	cysteine desulfurase family protein	-
LUY92_RS02030	mnmA	372820..373938 (+)	1119	WP_000066097.1	tRNA 2-thiouridine(34) synthase MnmA	-

Sequence

Protein

• Length: 424 a.a.
• Molecular weight: 47249.82 Da
• Isoelectric Point: 8.3526

>NTDB_id=550230 LUY92_RS02000 WP_000102726.1 367866..369140(-) (rarA) [Staphylococcus aureus strain 0.1239_III_ST239]
MSTEPLASRMRPKNIDEIISQQHLVGPKGIIRRMVDTKKLTSMIFYGPPGIGKTSIAKAISGSTQYKFRQLNAVTNTKKD
MQLVVEEAKMSGQVILLLDEIHRLDKAKQDFLLPHLENGKIVLIGATTSNPYHAINPAIRSRAQIFELYPLNDEDVRQAL
TRAIEDDENGLKTYQPKIDEDAMTYFSTQSQGDVRNALNALELAVLSADNDKDGYRHVTLQDAKDCLQKGAFVSDKDGDM
HYDVMSAFQKSIRGSDVNAALHYLARLIEAGDLPTIVRRLLVISYEDIGLASPNAGQRTLAAIESAERLGLPEARIPLSQ
AVIELCLSPKSNSAMSAIDSALSDIRNGHVGQIPNHLKDGHYQGAKDLGRSIGYKYPHQYVNGYVSQQYLPDKLKNKIYY
EPKTTSKSEQQLKEIYNNLLKQRP

Nucleotide

• Length: 1275 bp

>NTDB_id=550230 LUY92_RS02000 WP_000102726.1 367866..369140(-) (rarA) [Staphylococcus aureus strain 0.1239_III_ST239]
GTGAGTACAGAACCATTAGCATCGAGAATGCGCCCAAAAAATATAGATGAAATCATTTCCCAACAACATTTAGTTGGACC
AAAAGGCATTATCAGAAGAATGGTTGACACAAAAAAATTAACTTCAATGATTTTTTATGGTCCACCTGGTATAGGCAAAA
CAAGTATTGCCAAAGCAATTTCGGGCAGTACGCAATATAAATTCAGACAATTGAATGCTGTAACTAACACTAAAAAAGAT
ATGCAACTTGTTGTTGAAGAAGCTAAAATGTCTGGTCAAGTTATCTTGTTGTTAGATGAAATACATCGACTAGATAAAGC
TAAACAAGACTTTTTATTACCTCATTTAGAAAATGGCAAAATCGTCTTGATTGGTGCTACAACTTCAAATCCTTATCATG
CTATCAATCCAGCGATTCGTTCAAGAGCGCAAATTTTCGAGTTATATCCTTTAAATGACGAAGATGTGCGCCAAGCGTTA
ACTCGTGCAATAGAAGATGATGAGAATGGTTTGAAAACATATCAACCCAAAATTGATGAAGATGCCATGACCTACTTTTC
TACACAAAGCCAAGGTGATGTTCGTAATGCGTTAAATGCATTGGAATTAGCTGTATTAAGCGCAGATAATGACAAAGACG
GTTATCGACATGTTACATTGCAAGATGCTAAAGACTGTTTACAAAAAGGTGCATTTGTAAGTGATAAGGATGGTGACATG
CATTACGATGTTATGAGCGCTTTCCAAAAATCTATCCGTGGTAGCGACGTCAATGCCGCTTTACATTATTTAGCACGATT
AATTGAAGCTGGAGATTTACCTACAATAGTTCGACGATTACTTGTAATTAGCTATGAGGATATAGGCTTAGCCTCACCTA
ATGCTGGTCAGAGAACACTTGCTGCTATTGAATCAGCAGAACGTCTAGGTTTACCAGAAGCTAGAATTCCACTAAGCCAA
GCAGTAATCGAACTATGCTTATCACCTAAGTCAAATTCAGCAATGAGTGCCATTGATAGTGCATTGTCCGATATTAGAAA
CGGTCATGTGGGTCAAATTCCAAATCATTTAAAAGATGGACATTATCAAGGTGCTAAAGATCTAGGCCGATCTATTGGTT
ACAAATATCCACACCAATATGTTAATGGCTATGTTTCACAGCAATATTTACCTGATAAACTTAAAAACAAAATTTATTAT
GAACCAAAAACGACATCTAAAAGTGAACAACAACTCAAAGAAATATATAACAACTTACTTAAACAAAGGCCGTAA

Domains

Predicted by InterProScan.

• ATPase family associated with various cellular activities (AAA) (AAA) (43-145)

• AAA C-terminal domain (AAA_assoc_2) (175-253)

• MgsA AAA+ ATPase C terminal (MgsA_C) (254-418)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
rarA	Bacillus subtilis subsp. subtilis str. 168	68.81	99.057	0.682