Detailed information NTG0549274

Bioinformatically predicted

Overview

• Name: comH
• Type: Machinery gene
• Locus tag: J5F39_RS00455
• Genome accession: NZ_CP071936
• Coordinates: 93607..95046 (-)
• Length: 479 a.a.
• NCBI ID: WP_283491969.1
• Uniprot ID: -
• Organism: Helicobacter pylori strain MTT03
• Function: import of DNA into the periplasm (predicted from homology) DNA binding and uptake

Genomic Context

Location: 88607..100046

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
J5F39_RS00430	recG	89753..91615 (-)	1863	WP_283491966.1	ATP-dependent DNA helicase RecG	-
J5F39_RS00435	-	91692..92039 (+)	348	WP_283491967.1	hypothetical protein	-
J5F39_RS00440	-	92043..92678 (+)	636	WP_187925155.1	outer membrane protein	-
J5F39_RS00445	-	92675..93427 (-)	753	WP_283491968.1	exodeoxyribonuclease III	-
J5F39_RS00455	comH	93607..95046 (-)	1440	WP_283491969.1	competence protein	Machinery gene
J5F39_RS00460	dnaA	95275..96648 (-)	1374	WP_128019072.1	chromosomal replication initiator protein DnaA	-
J5F39_RS00465	-	96801..97343 (+)	543	WP_283491970.1	purine-nucleoside phosphorylase	-
J5F39_RS00470	-	97388..97627 (+)	240	WP_000461845.1	DUF2443 domain-containing protein	-
J5F39_RS00475	glmS	97628..99421 (+)	1794	WP_283491971.1	glutamine--fructose-6-phosphate transaminase (isomerizing)	-

Sequence

Protein

• Length: 479 a.a.
• Molecular weight: 54781.77 Da
• Isoelectric Point: 7.2363

>NTDB_id=549274 J5F39_RS00455 WP_283491969.1 93607..95046(-) (comH) [Helicobacter pylori strain MTT03]
MKKSLCLSFFLTFSNPLQALVIELLEEIKTSPHKGTFKAKVLDSKKPRQVLGIYNISTHKKLTLTITHISTAIVYQPLDE
KLSLETTLNPNRPTIPRNTQIVFSSKELKEAHAHQMPSLNAPMQKPQNKPHSSQQPSQNFSYPEPKLGSKNSKNSLLQPL
AIPSKISPTNETQTPTNDTKPPLKHSSEDQENNLFVAPPTEKTLPSNTPNTDASESNENNENRDNVEKQAIRDPNIKEFA
CGKWVYDDENLQAYRPSILKRIDKDKEVTTDITPCDYSTAENKSGKIITPYTKISVHKTEPLEEPQTFEAKNNFAILQAR
SSTEKCKRARARKDGTTRQCYLIEEPLKQAWESEYEITTQLVKAVYERPKQDDQVEPTFYETSELAYSSTRKSEITHNEL
NLNEKFMEFVEVYEGHYLNDIVKESSEYKEWVKNHVRFKEGVCMALEIEEQPRAKSTPLSIENSRVVCVKKGNYLFNEV

Nucleotide

• Length: 1440 bp

>NTDB_id=549274 J5F39_RS00455 WP_283491969.1 93607..95046(-) (comH) [Helicobacter pylori strain MTT03]
ATGAAAAAATCCCTTTGTCTGTCTTTCTTTCTGACTTTCTCTAACCCTCTTCAAGCCCTTGTGATCGAGCTTTTAGAAGA
GATCAAAACTTCGCCGCATAAAGGCACTTTTAAGGCTAAAGTCCTTGATTCTAAAAAACCAAGACAAGTTTTAGGCATTT
ATAATATCTCCACACACAAAAAACTCACGCTCACAATCACTCACATATCCACTGCAATCGTCTATCAACCCCTTGATGAA
AAACTTTCTTTAGAAACGACCTTAAACCCTAACCGCCCTACTATCCCTAGAAACACCCAAATTGTTTTTTCTTCAAAAGA
ATTGAAAGAAGCGCACGCGCACCAAATGCCTTCTTTAAACGCGCCCATGCAAAAACCACAAAACAAGCCCCATTCATCGC
AACAACCTTCTCAAAACTTTTCTTACCCAGAGCCCAAACTAGGCTCTAAAAACTCTAAAAACAGCCTTTTACAGCCTTTA
GCAATTCCTAGCAAAATAAGCCCCACTAACGAAACTCAAACGCCAACAAACGACACTAAACCCCCTTTAAAGCATTCTTC
AGAAGATCAAGAAAACAACCTCTTTGTAGCGCCACCCACCGAAAAAACGCTCCCTAGTAACACTCCTAACACTGATGCGA
GTGAAAGCAATGAAAATAACGAAAATAGGGATAATGTGGAAAAACAAGCGATTAGAGATCCCAATATTAAAGAATTTGCG
TGCGGGAAGTGGGTTTATGATGATGAAAATTTACAAGCCTATCGCCCAAGCATTTTAAAACGCATTGATAAAGACAAAGA
GGTTACAACAGACATTACCCCTTGCGATTACAGCACCGCTGAAAATAAAAGCGGTAAAATCATTACCCCCTATACTAAAA
TCTCCGTTCATAAAACAGAGCCTTTAGAAGAGCCACAAACTTTTGAAGCTAAAAACAATTTCGCCATTCTTCAAGCCAGA
AGCTCTACGGAAAAATGCAAAAGGGCTAGAGCGAGAAAAGACGGCACGACTAGGCAATGCTATCTGATAGAAGAGCCTTT
AAAACAAGCGTGGGAAAGTGAGTATGAAATCACCACGCAATTAGTGAAAGCCGTATATGAACGCCCCAAACAAGACGATC
AAGTAGAGCCGACTTTTTATGAAACCAGCGAATTGGCTTATTCTTCCACACGAAAAAGCGAAATAACGCATAATGAATTG
AATTTGAATGAAAAATTCATGGAATTTGTGGAAGTGTATGAAGGGCATTATTTAAACGATATAGTCAAAGAGAGCAGCGA
ATACAAAGAATGGGTTAAAAACCATGTGCGCTTTAAAGAAGGGGTGTGCATGGCCTTAGAAATAGAAGAGCAACCACGAG
CTAAAAGCACGCCTTTGAGTATTGAAAACTCTCGTGTTGTGTGTGTCAAAAAGGGGAATTATTTATTCAACGAAGTTTAA

Domains

No domain identified.

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
comH	Helicobacter pylori 26695	95.407	100	0.954