Detailed information NTG0547209

Bioinformatically predicted

Overview

• Name: recD2
• Type: Machinery gene
• Locus tag: J1899_RS15840
• Genome accession: NZ_CP071709
• Coordinates: 3184225..3186639 (-)
• Length: 804 a.a.
• NCBI ID: WP_214475135.1
• Uniprot ID: -
• Organism: Cytobacillus gottheilii strain 1839
• Function: homologous recombination (predicted from homology) Homologous recombination

Genomic Context

Location: 3179225..3191639

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
J1899_RS15805 (J1899_15810)	-	3179830..3180912 (-)	1083	WP_214475130.1	AI-2E family transporter	-
J1899_RS15810 (J1899_15815)	-	3181280..3182461 (-)	1182	WP_214475133.1	IS256 family transposase	-
J1899_RS15815 (J1899_15820)	-	3182806..3183000 (+)	195	WP_080844777.1	hypothetical protein	-
J1899_RS15820 (J1899_15825)	-	3183098..3183232 (-)	135	WP_082851637.1	YrzQ family protein	-
J1899_RS15825 (J1899_15830)	-	3183262..3183453 (-)	192	WP_066443225.1	hypothetical protein	-
J1899_RS15830 (J1899_15835)	-	3183474..3183968 (-)	495	WP_306806918.1	PRC-barrel domain-containing protein	-
J1899_RS15835 (J1899_15840)	-	3184003..3184152 (-)	150	WP_156495713.1	hypothetical protein	-
J1899_RS15840 (J1899_15845)	recD2	3184225..3186639 (-)	2415	WP_214475135.1	ATP-dependent RecD-like DNA helicase	Machinery gene
J1899_RS15845 (J1899_15850)	-	3186703..3187353 (-)	651	WP_066443223.1	tetratricopeptide repeat protein	-
J1899_RS15850 (J1899_15855)	mnmA	3187671..3188786 (-)	1116	WP_080844762.1	tRNA 2-thiouridine(34) synthase MnmA	-
J1899_RS15855 (J1899_15860)	-	3188908..3190047 (-)	1140	WP_214475138.1	cysteine desulfurase family protein	-
J1899_RS15860 (J1899_15865)	-	3190145..3190564 (-)	420	WP_080844756.1	Rrf2 family transcriptional regulator	-
J1899_RS15865 (J1899_15870)	-	3190561..3191235 (-)	675	WP_214475140.1	YitT family protein	-

Sequence

Protein

• Length: 804 a.a.
• Molecular weight: 90494.45 Da
• Isoelectric Point: 4.9912

>NTDB_id=547209 J1899_RS15840 WP_214475135.1 3184225..3186639(-) (recD2) [Cytobacillus gottheilii strain 1839]
MEEQGSLNLFSGAEEKYMKGKHLVTIFHNEQNMYTVLRLRVEDTNHTYEDKEAVVTGYFPKLHEHETYIFYGDLKEHPKF
GVQLHATHYRKDIPQTKQGVANYLSSELFKGIGIKTAESIVEELGENAISKILNEPSILDRVPKLSGEKAKLVYDTLMEH
QGLEQAMIALNQYGFGPQLSMRIYQAYKEQTVDMIQNNPYKLVEDVEGIGFSRADELGYQIGISGSHPDRIRAACLYMLE
TGSMQNGHVFMYARDLLPSVKQLLEDNKRDQIEFTDISKEIVKLGEEGKIMAEDQRLYLPPLYFSEKGIVTNIKRILQQT
QYDQQFPESEFLMALGELEERLGVQYAPSQKEAIQKALMSPMLILTGGPGTGKTTVIKGIVELYGELHGCSLDPGAYKKE
ETFPFLLAAPTGRAAKRMAESTGLPAVTIHRLLGWNGSEGFDHHDENPLEGKILIVDETSMVDIWLANQLFKAVPENMQV
ILVGDEDQLPSVGPGQVLKDLLRSERLPTVRLVDIYRQAEGSSIIELAHEMKKGQLPANISAPQPDRSFIKCGPGQIGAV
VEKVVLNAKKKGYTAKDIQVLAPMYRGPAGIDKLNLMLQEIFNSNPDGSRKELAFGDVTYRIGDKVLQLVNQPENHVFNG
DMGEIVSIFYAKENTEKQDMIVVSFEGIEATYTRQDLNQITHAYCCSVHKSQGSEFPIVILPVVKSYYRMLRRNLLYTAI
TRSRQFLILCGEEDALRIGVERADEQARLTRLTEKLQDGIIEQGGEVPLQLDENLSYEEILLAADPMIGMENITPYDFME
KGYS

Nucleotide

• Length: 2415 bp

>NTDB_id=547209 J1899_RS15840 WP_214475135.1 3184225..3186639(-) (recD2) [Cytobacillus gottheilii strain 1839]
ATGGAGGAGCAGGGCTCATTAAACTTATTTTCCGGTGCAGAAGAAAAATATATGAAAGGCAAGCATCTTGTGACGATTTT
CCATAACGAGCAAAACATGTACACGGTGCTGCGTTTGCGGGTTGAAGATACAAACCATACATATGAAGATAAAGAAGCTG
TGGTCACAGGCTATTTTCCAAAGCTTCATGAACATGAGACATATATTTTTTACGGAGATCTGAAGGAGCATCCGAAATTT
GGCGTCCAGCTTCATGCTACCCATTACCGCAAGGATATTCCGCAGACAAAGCAGGGCGTTGCCAATTATTTATCAAGTGA
GCTATTTAAAGGGATTGGCATTAAAACGGCGGAAAGCATAGTGGAGGAGCTTGGAGAGAATGCGATCTCTAAAATTCTGA
ATGAGCCTTCTATACTTGATCGGGTTCCCAAGCTTTCCGGCGAAAAAGCAAAGCTTGTTTATGATACGTTAATGGAGCAT
CAGGGATTGGAGCAGGCCATGATTGCTCTAAATCAATATGGCTTTGGGCCGCAGCTATCAATGCGAATCTATCAGGCATA
TAAGGAACAAACGGTTGATATGATTCAAAATAATCCATACAAGCTTGTTGAAGATGTGGAAGGAATCGGTTTTTCGCGCG
CGGATGAGCTGGGATATCAGATCGGGATATCAGGCAGCCATCCTGATCGCATTAGAGCCGCATGCCTTTATATGCTTGAA
ACCGGCAGCATGCAGAATGGACATGTGTTTATGTATGCCAGAGACCTTCTCCCGAGTGTTAAGCAGCTGCTGGAGGATAA
TAAGCGTGACCAGATCGAGTTCACTGATATTTCCAAGGAAATTGTGAAGCTTGGGGAAGAAGGCAAGATTATGGCGGAGG
ATCAGCGCCTCTATTTGCCGCCTTTGTATTTTTCAGAAAAGGGAATTGTGACAAATATAAAAAGGATTCTGCAGCAGACC
CAATATGATCAGCAATTTCCTGAATCAGAGTTTTTAATGGCATTAGGTGAGCTTGAAGAACGGCTTGGGGTCCAGTATGC
TCCTTCGCAAAAGGAAGCGATCCAGAAGGCGCTGATGAGTCCGATGCTAATTTTAACCGGTGGTCCAGGTACGGGAAAAA
CAACTGTCATTAAAGGAATTGTGGAACTGTATGGCGAACTGCATGGCTGCTCGCTTGATCCCGGCGCTTATAAGAAGGAA
GAAACCTTCCCGTTTCTGCTTGCTGCACCAACAGGCAGAGCGGCTAAACGAATGGCCGAATCTACAGGACTGCCCGCTGT
AACGATTCATCGTCTGCTCGGGTGGAATGGCAGTGAAGGCTTTGATCACCATGATGAAAATCCGCTTGAGGGAAAAATTT
TAATTGTGGATGAAACGTCGATGGTTGATATTTGGCTGGCGAATCAGCTGTTTAAAGCTGTGCCAGAGAATATGCAGGTT
ATTTTAGTAGGTGATGAAGATCAGCTGCCATCCGTGGGACCGGGTCAGGTTCTCAAAGATCTACTTCGATCAGAAAGGCT
CCCAACTGTCCGCTTAGTGGATATCTACCGTCAGGCTGAAGGCTCATCCATTATCGAGCTTGCCCATGAAATGAAAAAAG
GACAGCTTCCGGCGAATATTAGCGCTCCACAGCCTGACCGTTCTTTTATAAAATGCGGACCAGGACAAATTGGGGCAGTT
GTTGAGAAAGTAGTTTTAAATGCGAAGAAAAAAGGCTATACAGCCAAGGACATTCAGGTGCTGGCGCCTATGTATAGAGG
ACCTGCAGGAATTGACAAGCTTAATTTGATGCTGCAGGAAATTTTCAACAGCAATCCCGATGGATCGCGGAAGGAGCTGG
CCTTTGGTGATGTAACATATCGGATTGGCGATAAAGTGCTTCAGCTTGTGAATCAGCCTGAAAATCATGTATTTAATGGC
GATATGGGTGAAATTGTTTCCATCTTTTATGCAAAAGAAAATACGGAAAAGCAGGATATGATTGTCGTTTCTTTTGAAGG
AATCGAAGCAACATATACTAGACAGGACTTGAATCAGATCACGCATGCATACTGCTGCTCTGTTCATAAATCACAGGGAA
GCGAGTTTCCGATCGTGATTTTGCCGGTTGTGAAAAGCTATTATAGAATGCTGCGGAGAAATCTGTTATACACCGCTATT
ACACGAAGCAGACAGTTTTTAATATTATGCGGAGAAGAGGACGCCCTCAGAATAGGTGTCGAACGGGCAGATGAGCAGGC
AAGACTGACAAGATTAACGGAAAAATTACAGGACGGCATCATAGAGCAGGGCGGAGAAGTTCCACTTCAACTCGACGAAA
ATCTGTCATACGAAGAAATTCTGCTGGCTGCTGACCCAATGATTGGGATGGAAAATATAACGCCGTATGATTTTATGGAA
AAAGGATATAGCTAA

Domains

Predicted by InterproScan.

• AAA domain (AAA_30) (346-552)

• UvrD-like helicase C-terminal domain (UvrD_C_2) (682-730)

• ATP-dependent RecD-like DNA helicase SH3 domain (SH3_13) (594-665)

• Helix-hairpin-helix containing domain (HHH_RecD2) (159-250)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
recD2	Bacillus subtilis subsp. subtilis str. 168	63.924	98.259	0.628