Detailed information NTG0054705

Bioinformatically predicted

Overview

• Name: pilM
• Type: Machinery gene
• Locus tag: CAL7507_RS08245
• Genome accession: NC_019682
• Coordinates: 1875612..1876718 (+)
• Length: 368 a.a.
• NCBI ID: WP_015128006.1
• Uniprot ID: K9PHB7
• Organism: Calothrix sp. PCC 7507
• Function: type IV pilus biogenesis and function (predicted from homology) DNA binding and uptake

Genomic Context

Location: 1870612..1881718

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
CAL7507_RS08220 (Cal7507_1727)	-	1870951..1871463 (-)	513	WP_015128001.1	TIGR02652 family protein	-
CAL7507_RS08225 (Cal7507_1728)	-	1871703..1872227 (+)	525	WP_042341983.1	gamma carbonic anhydrase family protein	-
CAL7507_RS08230 (Cal7507_1729)	-	1872383..1872508 (+)	126	WP_015128003.1	photosystem II protein Y	-
CAL7507_RS08235 (Cal7507_1730)	-	1872658..1873917 (+)	1260	WP_015128004.1	folylpolyglutamate synthase/dihydrofolate synthase family protein	-
CAL7507_RS08240 (Cal7507_1731)	-	1874019..1875317 (-)	1299	WP_015128005.1	sugar ABC transporter substrate-binding protein	-
CAL7507_RS08245 (Cal7507_1732)	pilM	1875612..1876718 (+)	1107	WP_015128006.1	type IV pilus assembly protein PilM	Machinery gene
CAL7507_RS08250 (Cal7507_1733)	-	1876724..1877491 (+)	768	WP_015128007.1	PilN domain-containing protein	-
CAL7507_RS08255 (Cal7507_1734)	-	1877488..1878246 (+)	759	WP_015128008.1	hypothetical protein	-
CAL7507_RS08260 (Cal7507_1735)	-	1878580..1880733 (+)	2154	WP_015128009.1	type IV pilus secretin family protein	-

Sequence

Protein

• Length: 368 a.a.
• Molecular weight: 40243.13 Da
• Isoelectric Point: 4.3386

>NTDB_id=54705 CAL7507_RS08245 WP_015128006.1 1875612..1876718(+) (pilM) [Calothrix sp. PCC 7507]
MVKSFNSLFGKSNTGVGIELAPERVNIVQLRKQRQGLKIEALTSVPVPEGLVKDGQIADPPAMAELIQQALADSKIKASR
VATGVPGRDSIVRLIPVPAELDDTELRDMVLNHEASLYLPYPREEADVDYQKLGYFVDEDGIEKVRVLLVATRKEVTDTY
ISTFEQAGLQIDVLEINSFALLRTIREQLRQFGPQEAAVLVDIEFDSSEIAIIVNGVPQFSRTVPIGTYQIQTALSRAMS
LPTSRDMELLQGMTIIPASVEDGKTGVTEINPGMGAILRVLGEITDELRRSIDFYLNQSENLEVAQILLAGPGGGLQGLD
EFFTQRLSLPTTQIDPIGSLSIAVDEEKYPVVQRSGLAIVLGLGMREV

Nucleotide

• Length: 1107 bp

>NTDB_id=54705 CAL7507_RS08245 WP_015128006.1 1875612..1876718(+) (pilM) [Calothrix sp. PCC 7507]
GTGGTGAAAAGTTTCAATAGTCTATTTGGCAAATCTAATACAGGGGTCGGTATTGAACTTGCACCAGAACGGGTGAATAT
AGTTCAGCTACGCAAACAGCGCCAAGGCTTAAAAATAGAAGCATTGACATCTGTGCCAGTTCCAGAAGGATTGGTTAAAG
ATGGTCAAATCGCCGACCCCCCAGCCATGGCCGAGTTAATTCAGCAGGCGCTGGCTGACAGCAAAATCAAAGCTTCTCGT
GTTGCTACTGGTGTACCAGGAAGAGATTCGATTGTACGTCTAATTCCTGTGCCAGCAGAGTTAGATGACACAGAATTACG
AGATATGGTGTTAAACCATGAAGCCAGTTTGTATTTACCCTATCCTCGTGAAGAGGCTGATGTAGATTATCAGAAACTTG
GGTACTTTGTAGATGAAGATGGCATTGAAAAGGTACGCGTACTCTTAGTTGCCACCCGTAAGGAGGTGACGGATACATAT
ATTAGTACATTTGAGCAGGCGGGATTACAGATCGACGTTCTAGAGATTAACAGTTTTGCGCTATTGCGGACAATTCGCGA
ACAACTGCGGCAATTTGGGCCACAAGAAGCAGCGGTGTTAGTTGATATAGAGTTCGACAGTTCCGAAATTGCCATCATCG
TTAACGGAGTCCCGCAATTTTCCCGCACAGTGCCTATAGGCACTTATCAAATACAAACTGCCTTATCGAGGGCGATGAGC
TTACCCACATCACGAGATATGGAACTGTTGCAGGGAATGACAATTATCCCAGCTTCTGTGGAAGATGGGAAAACTGGTGT
AACTGAAATCAATCCTGGTATGGGAGCCATATTAAGAGTCTTGGGAGAAATCACAGACGAGCTGCGCCGTTCCATCGATT
TTTATCTCAATCAGAGTGAAAACTTGGAAGTAGCGCAAATTTTACTAGCCGGTCCAGGGGGCGGATTACAAGGGCTAGAT
GAGTTTTTTACTCAAAGATTAAGTTTACCGACTACCCAAATTGATCCTATCGGATCTTTGTCCATCGCTGTTGATGAGGA
AAAATACCCTGTGGTGCAACGCTCTGGTTTAGCAATAGTGCTTGGTCTAGGAATGCGAGAGGTTTAA

Domains

Predicted by InterproScan.

• Type IV pilus assembly protein PilM; (PilM_2) (17-238)

• Type IV pilus assembly protein PilM; (PilM_2) (283-367)

3D structure

• AlphaFold DB: K9PHB7

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
pilM	Synechocystis sp. PCC 6803	65.668	99.728	0.655