Detailed information NTG0546958

Bioinformatically predicted

Overview

• Name: rarA
• Type: Machinery gene
• Locus tag: LOK81_RS03785
• Genome accession: NZ_CP087992
• Coordinates: 859413..860780 (+)
• Length: 455 a.a.
• NCBI ID: WP_004083742.1
• Uniprot ID: -
• Organism: Xylella fastidiosa subsp. multiplex strain CFBP8433
• Function: homologous recombination (predicted from homology) Homologous recombination

Genomic Context

Location: 854413..865780

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
LOK81_RS03775 (LOK81_03745)	-	856182..858092 (+)	1911	WP_154437122.1	DUF3857 domain-containing transglutaminase family protein	-
LOK81_RS03780 (LOK81_03750)	lolA	858655..859281 (+)	627	WP_049756311.1	outer membrane lipoprotein chaperone LolA	-
LOK81_RS03785 (LOK81_03755)	rarA	859413..860780 (+)	1368	WP_004083742.1	replication-associated recombination protein A	Machinery gene
LOK81_RS03790 (LOK81_03760)	crcB	860941..861342 (+)	402	WP_004083741.1	fluoride efflux transporter CrcB	-
LOK81_RS03795 (LOK81_03765)	-	862018..863514 (+)	1497	WP_154437124.1	ATP-binding protein	-
LOK81_RS03800 (LOK81_03770)	folK	863640..864155 (+)	516	WP_031345731.1	2-amino-4-hydroxy-6- hydroxymethyldihydropteridine diphosphokinase	-
LOK81_RS03805 (LOK81_03775)	-	864166..864903 (-)	738	WP_004083738.1	pteridine reductase	-

Sequence

Protein

• Length: 455 a.a.
• Molecular weight: 50836.08 Da
• Isoelectric Point: 6.5799

>NTDB_id=546958 LOK81_RS03785 WP_004083742.1 859413..860780(+) (rarA) [Xylella fastidiosa subsp. multiplex strain CFBP8433]
MTRQRFPTLQHDLLGVVPLLQPLAERMRPRTLHEMVGQKRLLAPDRALHRAVASGNVHSMILWGPPGCGKTTLSLLLAHY
IDAEFRAVSAVLSGLPEVRQILAEAAQRFSEGRRTVLFVDEVHRFNKMQQDAFLPHIERGSIIFVGATTENPSFELNSAL
LSRCRVHVLEAVSSQDIVVALQRALQDTERGLGGQKIEVSEASLLEIAKAADGDVRRALTLLEIAAELAQDEDEQITADL
LSQVLADRSRRFDKRGEQFYDQISALHKSVRSSNPDAALYWLLRMLDGGCDPIYLARRLTRMAIEDIGLADPRAQSMALE
AWDIYERLGSPEGDLAFAQLVLYLASTAKSNAGYVAFNVAKEDIRQTGTQDVPLHLRNAPTRLMKSLGYGIEYQYDHDAE
NGVALEQTCFPDALGERIYYQPVSRGLEIKLKEKLDWLRAARAQIQADKPQRPRA

Nucleotide

• Length: 1368 bp

>NTDB_id=546958 LOK81_RS03785 WP_004083742.1 859413..860780(+) (rarA) [Xylella fastidiosa subsp. multiplex strain CFBP8433]
GTGACACGACAGCGCTTTCCGACTCTTCAGCATGATTTGCTTGGTGTGGTTCCTCTCTTGCAGCCACTGGCCGAGCGCAT
GCGTCCTCGTACTCTTCATGAGATGGTAGGACAGAAGCGCTTGCTTGCCCCAGATCGTGCATTGCATCGTGCGGTGGCTT
CCGGGAATGTGCATTCCATGATTTTGTGGGGACCGCCAGGGTGCGGCAAGACGACATTGTCATTGCTGTTAGCGCATTAC
ATTGATGCAGAATTTCGGGCAGTCTCGGCTGTTCTTTCGGGGTTGCCGGAGGTGCGTCAGATCTTGGCTGAGGCTGCGCA
GCGTTTTTCTGAAGGACGCCGCACCGTCTTGTTCGTGGACGAAGTGCATCGTTTTAACAAGATGCAGCAGGATGCGTTTC
TGCCGCATATCGAGCGTGGTTCCATTATTTTCGTTGGTGCCACTACTGAGAATCCATCCTTCGAATTGAACTCGGCGTTA
CTGTCGCGTTGCCGTGTCCACGTGTTGGAGGCAGTGTCGTCACAGGATATCGTTGTGGCATTGCAGCGGGCGTTGCAGGA
TACGGAGCGGGGTTTGGGTGGGCAGAAGATTGAAGTGTCTGAAGCCTCTCTGTTGGAGATTGCCAAGGCTGCAGATGGTG
ACGTGCGTCGTGCGCTCACCTTGTTGGAGATTGCTGCTGAGCTTGCCCAGGATGAGGATGAGCAGATAACCGCTGACTTG
CTTTCGCAAGTGCTTGCCGATCGTAGTCGGCGCTTCGACAAACGGGGGGAGCAGTTCTATGACCAGATTTCGGCCTTGCA
CAAGAGTGTACGTAGTTCCAACCCGGATGCGGCATTGTATTGGTTGCTGCGTATGCTGGATGGTGGTTGTGATCCTATCT
ACTTGGCCCGGCGCTTGACCCGCATGGCGATTGAGGATATCGGTTTGGCTGATCCGCGTGCACAGTCGATGGCTCTGGAG
GCTTGGGACATCTATGAGCGGTTGGGTAGCCCGGAGGGAGATCTGGCGTTCGCGCAGTTGGTGCTGTACTTGGCAAGTAC
AGCAAAATCGAATGCTGGCTATGTTGCGTTCAATGTGGCCAAGGAGGACATTCGCCAGACGGGTACTCAGGATGTTCCGC
TACATCTGCGCAATGCACCGACCAGACTCATGAAAAGTCTCGGTTACGGTATCGAGTATCAGTACGATCATGATGCTGAG
AACGGTGTTGCGCTGGAACAGACTTGTTTTCCCGATGCGCTGGGGGAGCGTATTTACTACCAACCGGTATCCCGCGGTCT
GGAGATTAAGCTGAAGGAGAAGTTGGACTGGTTGCGTGCAGCACGTGCTCAGATTCAAGCGGATAAGCCGCAGCGGCCGC
GTGCATAG

Domains

Predicted by InterProScan.

• MgsA AAA+ ATPase C terminal (MgsA_C) (273-438)

• AAA C-terminal domain (AAA_assoc_2) (194-271)

• Holliday junction DNA helicase RuvB P-loop domain (RuvB_N) (27-146)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
rarA	Bacillus subtilis subsp. subtilis str. 168	38.771	92.967	0.36