Detailed information NTG0546638

Bioinformatically predicted

Overview

• Name: proC
• Type: Machinery gene
• Locus tag: BKM86_RS05220
• Genome accession: NZ_CP071585
• Coordinates: 1004202..1004933 (+)
• Length: 243 a.a.
• NCBI ID: WP_002858388.1
• Uniprot ID: -
• Organism: Campylobacter jejuni subsp. jejuni strain GB26
• Function: DNA uptake (predicted from homology) DNA binding and uptake

Genomic Context

Location: 999202..1009933

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
BKM86_RS05190 (BKM86_05190)	rpsF	999344..999721 (+)	378	WP_002865739.1	30S ribosomal protein S6	-
BKM86_RS05195 (BKM86_05195)	ssb	999730..1000281 (+)	552	WP_002865738.1	single-stranded DNA-binding protein	-
BKM86_RS05200 (BKM86_05200)	rpsR	1000292..1000552 (+)	261	WP_002853032.1	30S ribosomal protein S18	-
BKM86_RS05205 (BKM86_05205)	lon	1000613..1002988 (-)	2376	WP_002868636.1	endopeptidase La	-
BKM86_RS05210 (BKM86_05210)	-	1003005..1003652 (-)	648	WP_002852961.1	outer membrane protein assembly factor BamD	-
BKM86_RS05215 (BKM86_05215)	fliW	1003813..1004202 (+)	390	WP_002852982.1	flagellar assembly protein FliW	-
BKM86_RS05220 (BKM86_05220)	proC	1004202..1004933 (+)	732	WP_002858388.1	pyrroline-5-carboxylate reductase	Machinery gene
BKM86_RS05225 (BKM86_05225)	ctsT	1004930..1005232 (+)	303	WP_002853046.1	type II secretion system protein	Machinery gene
BKM86_RS05230 (BKM86_05230)	-	1005229..1005892 (+)	664	Protein_1021	hypothetical protein	-
BKM86_RS05235 (BKM86_05235)	-	1005889..1006341 (+)	453	WP_002859148.1	hypothetical protein	-
BKM86_RS05240 (BKM86_05240)	hemD	1006338..1006967 (-)	630	WP_002858312.1	uroporphyrinogen-III synthase	-
BKM86_RS05245 (BKM86_05245)	thiE	1006945..1007577 (-)	633	WP_002858441.1	thiamine phosphate synthase	-
BKM86_RS05250 (BKM86_05250)	thiD	1007567..1008379 (-)	813	WP_002858043.1	bifunctional hydroxymethylpyrimidine kinase/phosphomethylpyrimidine kinase	-
BKM86_RS05255 (BKM86_05255)	-	1008376..1009062 (-)	687	WP_002858132.1	endonuclease III domain-containing protein	-
BKM86_RS05260 (BKM86_05260)	-	1009059..1009820 (-)	762	WP_002852748.1	ATP-binding protein	-

Sequence

Protein

• Length: 243 a.a.
• Molecular weight: 26586.98 Da
• Isoelectric Point: 8.5934

>NTDB_id=546638 BKM86_RS05220 WP_002858388.1 1004202..1004933(+) (proC) [Campylobacter jejuni subsp. jejuni strain GB26]
MLYILANGSMATALAYGLKDDYEICIVGRSIEKLQALAKEGFKTLLYKDFNIEGKDVILAFKPYALENIAQMLKGQARIL
ISVLANVDFEKLQTIKAQNYVRIIPNTAAKYKASTTPYILKNSHFENEILDILKTFGSAYKLDNEIQMNAAMAISGCAPA
FLALIAESIANAGVYEGLSKELSLNLTRSLFKSSNALLEHEHPAIIKENICSPGGVTIKGIKILEQKGIRGSFFEAINAS
SAK

Nucleotide

• Length: 732 bp

>NTDB_id=546638 BKM86_RS05220 WP_002858388.1 1004202..1004933(+) (proC) [Campylobacter jejuni subsp. jejuni strain GB26]
ATGCTCTATATACTTGCAAATGGATCTATGGCAACAGCCTTAGCCTATGGGTTAAAAGATGATTATGAAATTTGTATAGT
AGGAAGAAGTATAGAAAAACTTCAAGCCCTCGCCAAAGAAGGCTTTAAAACCTTACTTTACAAAGATTTTAACATAGAAG
GTAAAGATGTTATTTTAGCATTTAAACCTTATGCTTTAGAAAATATTGCTCAAATGCTAAAAGGACAAGCACGTATCTTA
ATCTCTGTTTTAGCCAATGTTGATTTTGAAAAACTACAAACCATCAAAGCTCAAAATTATGTTAGAATAATACCCAATAC
AGCAGCTAAATACAAGGCTTCAACCACACCATATATACTTAAAAACTCTCATTTTGAAAATGAAATTTTAGACATTTTAA
AAACTTTTGGCTCGGCTTATAAATTAGATAATGAAATACAAATGAATGCAGCTATGGCGATTAGCGGCTGCGCTCCTGCT
TTTTTAGCACTTATAGCAGAAAGCATTGCTAATGCTGGAGTTTATGAAGGTTTGTCAAAAGAACTTAGTCTCAATCTTAC
GCGCTCTTTATTTAAAAGCTCTAATGCTTTACTAGAACATGAACATCCAGCTATTATCAAAGAAAATATTTGCTCCCCTG
GCGGAGTTACAATAAAAGGCATAAAAATACTCGAACAAAAAGGAATTCGCGGAAGTTTTTTTGAAGCCATAAATGCTAGC
AGCGCTAAATGA

Domains

Predicted by InterproScan.

• Pyrroline-5-carboxylate reductase dimerisation (P5CR_dimer) (145-242)

• NADP oxidoreductase coenzyme F420-dependent (F420_oxidored) (4-85)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
proC	Campylobacter jejuni subsp. jejuni 81-176	99.177	100	0.992