Detailed information    

insolico Bioinformatically predicted

Overview

Name   ctsG   Type   Machinery gene
Locus tag   J3Q18_RS06385 Genome accession   NZ_CP071580
Coordinates   1261425..1261928 (-) Length   167 a.a.
NCBI ID   WP_052802646.1    Uniprot ID   A0A5T0NME8
Organism   Campylobacter jejuni strain R23     
Function   type II secretion system/type IV pilin; DNA uptake (predicted from homology)   
DNA binding and uptake

Genomic Context

Location: 1256425..1266928
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  J3Q18_RS06370 (J3Q18_06370) - 1256518..1258245 (-) 1728 WP_207420157.1 flagellin A -
  J3Q18_RS06375 (J3Q18_06375) - 1258328..1260154 (-) 1827 WP_052802645.1 motility associated factor glycosyltransferase family protein -
  J3Q18_RS06380 (J3Q18_06380) - 1260164..1261414 (-) 1251 WP_052805150.1 DUF2920 family protein -
  J3Q18_RS06385 (J3Q18_06385) ctsG 1261425..1261928 (-) 504 WP_052802646.1 prepilin-type N-terminal cleavage/methylation domain-containing protein Machinery gene
  J3Q18_RS06390 (J3Q18_06390) tsaD 1261929..1262936 (-) 1008 WP_002865639.1 tRNA (adenosine(37)-N6)-threonylcarbamoyltransferase complex transferase subunit TsaD -
  J3Q18_RS06395 (J3Q18_06395) - 1262933..1264327 (-) 1395 WP_052802647.1 M99 family carboxypeptidase catalytic domain-containing protein -
  J3Q18_RS06400 (J3Q18_06400) dxr 1264329..1265399 (-) 1071 WP_002855670.1 1-deoxy-D-xylulose-5-phosphate reductoisomerase -
  J3Q18_RS06405 (J3Q18_06405) cdsA 1265396..1266121 (-) 726 WP_002856027.1 phosphatidate cytidylyltransferase -
  J3Q18_RS06410 (J3Q18_06410) - 1266130..1266468 (-) 339 WP_002855905.1 hypothetical protein -

Sequence

Protein


Download         Length: 167 a.a.        Molecular weight: 18356.18 Da        Isoelectric Point: 7.2439

>NTDB_id=546510 J3Q18_RS06385 WP_052802646.1 1261425..1261928(-) (ctsG) [Campylobacter jejuni strain R23]
MKKAFTILELVFVIVILGILAAIALPKMSSSKHEAEVSKSLNNLKTLINDISIYTLKNDHLSSIKTMSNASGVENVDLSN
FNGIKEVNFRVSDDKECLKLVFINKADFILMGISSNEASKNAIINAANQSHEDLENIDFTSSSSNKACVILSKNENFKNL
ASKIYLL

Nucleotide


Download         Length: 504 bp        

>NTDB_id=546510 J3Q18_RS06385 WP_052802646.1 1261425..1261928(-) (ctsG) [Campylobacter jejuni strain R23]
ATGAAAAAAGCTTTTACCATATTAGAACTTGTTTTTGTGATTGTTATTTTGGGAATTTTAGCCGCTATTGCTTTACCAAA
AATGAGTTCAAGCAAGCATGAAGCCGAGGTTAGTAAGTCTTTAAACAACCTTAAAACTTTGATCAACGATATAAGCATTT
ATACTTTGAAAAATGATCATTTAAGCTCTATAAAAACGATGAGTAATGCAAGCGGAGTTGAAAATGTTGATCTTAGTAAT
TTTAACGGTATAAAAGAAGTAAATTTTCGCGTAAGCGATGATAAAGAATGCTTAAAACTTGTTTTTATAAATAAGGCTGA
TTTTATACTCATGGGAATTTCAAGCAATGAAGCAAGTAAAAATGCCATCATCAACGCAGCCAATCAAAGCCATGAAGATT
TAGAAAATATAGACTTTACAAGCTCTTCTAGTAACAAAGCTTGCGTGATCTTAAGTAAGAATGAAAATTTTAAAAACCTA
GCGAGTAAAATTTATCTTTTATAG

Domains

Predicted by InterproScan.

Prokaryotic N-terminal methylation motif (N_methyl)

(2-25)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure
  AlphaFold DB A0A5T0NME8

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  ctsG Campylobacter jejuni subsp. jejuni 81-176

91.617

100

0.916