Detailed information
Bioinformatically predicted
Overview
| Name | rarA | Type | Machinery gene |
| Locus tag | LOZ99_RS19850 | Genome accession | NZ_CP087344 |
| Coordinates | 4067687..4068952 (-) | Length | 421 a.a. |
| NCBI ID | WP_001285403.1 | Uniprot ID | A0A0D5YDM8 |
| Organism | Acinetobacter baumannii strain DB007 | ||
| Function | homologous recombination (predicted from homology) Homologous recombination |
||
Genomic Context
Location: 4062687..4073952
| Locus tag | Gene name | Coordinates (strand) | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| LOZ99_RS19820 | pncA | 4062912..4063556 (-) | 645 | WP_001985076.1 | bifunctional nicotinamidase/pyrazinamidase | - |
| LOZ99_RS19825 | dapA | 4063886..4064779 (+) | 894 | WP_000193600.1 | 4-hydroxy-tetrahydrodipicolinate synthase | - |
| LOZ99_RS19830 | - | 4064795..4065397 (+) | 603 | WP_001177091.1 | hypothetical protein | - |
| LOZ99_RS19835 | purC | 4065434..4066153 (+) | 720 | WP_000917863.1 | phosphoribosylaminoimidazolesuccinocarboxamide synthase | - |
| LOZ99_RS19840 | - | 4066343..4066546 (+) | 204 | WP_000418560.1 | hypothetical protein | - |
| LOZ99_RS19845 | - | 4066832..4067671 (+) | 840 | WP_000349500.1 | formate/nitrite transporter family protein | - |
| LOZ99_RS19850 | rarA | 4067687..4068952 (-) | 1266 | WP_001285403.1 | replication-associated recombination protein A | Machinery gene |
| LOZ99_RS19855 | - | 4069058..4070227 (-) | 1170 | WP_001990830.1 | PQQ-dependent sugar dehydrogenase | - |
| LOZ99_RS19860 | - | 4070340..4070798 (-) | 459 | WP_000102818.1 | YcgN family cysteine cluster protein | - |
| LOZ99_RS19865 | - | 4070993..4071151 (+) | 159 | WP_000490267.1 | DUF1328 domain-containing protein | - |
| LOZ99_RS19870 | - | 4071323..4072060 (+) | 738 | WP_000100767.1 | dienelactone hydrolase family protein | - |
| LOZ99_RS19875 | - | 4072245..4072607 (+) | 363 | WP_000130110.1 | HIT family protein | - |
| LOZ99_RS19880 | mutY | 4072748..4073782 (+) | 1035 | WP_001113866.1 | A/G-specific adenine glycosylase | - |
Sequence
Protein
Download Length: 421 a.a. Molecular weight: 46975.69 Da Isoelectric Point: 5.8354
>NTDB_id=545602 LOZ99_RS19850 WP_001285403.1 4067687..4068952(-) (rarA) [Acinetobacter baumannii strain DB007]
MSDTHIPLPERLRPRDLSEIIGQDHLLGEHAPLRQMIDQGHLPSIIFWGPPGVGKTTIALLLAQAIDRPFVSLSALNTGV
KELREVIAESGDLLTPVVFIDEIHRFNKSQQDALLGAVEKGKITLIGATTENPSFEVNSALLSRCQVYTLNSLDSEAIQM
LLNNALQNDKFLKERYIHIEEYDALLQFAAGDARKALNLLDLIASTFEPEVENTINNAVVVKVAQQNIARYDKSGEQHYD
LVSAFIKSIRGSDPDAALYWMARMLKGGEDPVFIARRMLIAASEDIGNSNPNALLLAGECFRSVQAVGMPEARIILGQTA
VYLATSAKSNSTYLAINKALELAEKTANLPVPLHLRNAPTKLMKQQGYGINYLYPHDYPEHFVLQDYLPPELKGTKLYES
ARNKREVEGERLQQRRWQQEQ
MSDTHIPLPERLRPRDLSEIIGQDHLLGEHAPLRQMIDQGHLPSIIFWGPPGVGKTTIALLLAQAIDRPFVSLSALNTGV
KELREVIAESGDLLTPVVFIDEIHRFNKSQQDALLGAVEKGKITLIGATTENPSFEVNSALLSRCQVYTLNSLDSEAIQM
LLNNALQNDKFLKERYIHIEEYDALLQFAAGDARKALNLLDLIASTFEPEVENTINNAVVVKVAQQNIARYDKSGEQHYD
LVSAFIKSIRGSDPDAALYWMARMLKGGEDPVFIARRMLIAASEDIGNSNPNALLLAGECFRSVQAVGMPEARIILGQTA
VYLATSAKSNSTYLAINKALELAEKTANLPVPLHLRNAPTKLMKQQGYGINYLYPHDYPEHFVLQDYLPPELKGTKLYES
ARNKREVEGERLQQRRWQQEQ
Nucleotide
Download Length: 1266 bp
>NTDB_id=545602 LOZ99_RS19850 WP_001285403.1 4067687..4068952(-) (rarA) [Acinetobacter baumannii strain DB007]
ATGTCAGACACCCATATTCCACTTCCTGAACGCCTGCGCCCGAGAGACTTGTCTGAAATTATTGGGCAAGATCATTTGTT
AGGTGAACATGCGCCCTTACGTCAAATGATTGATCAGGGGCATTTGCCTTCTATTATTTTTTGGGGGCCGCCAGGCGTCG
GTAAAACGACAATTGCTTTGCTTTTAGCTCAGGCAATAGATCGTCCATTTGTGAGCTTATCTGCGCTGAATACGGGCGTA
AAAGAATTACGTGAAGTGATTGCAGAAAGTGGTGACTTACTGACACCTGTAGTTTTTATTGACGAAATCCATCGCTTTAA
TAAATCACAGCAAGATGCATTATTAGGTGCCGTAGAAAAAGGTAAAATTACCTTAATTGGCGCCACCACTGAAAACCCGT
CTTTTGAAGTCAATAGTGCACTTTTATCACGCTGTCAGGTCTATACCTTAAACAGTTTAGACAGTGAAGCAATTCAGATG
CTACTTAACAATGCACTCCAAAACGATAAATTTTTAAAAGAACGTTATATTCATATTGAAGAGTATGATGCTCTTTTACA
GTTTGCAGCAGGTGATGCCCGTAAAGCACTCAATTTACTTGACTTAATTGCAAGTACTTTTGAGCCCGAAGTTGAAAATA
CGATTAATAATGCGGTTGTAGTAAAAGTCGCTCAGCAAAATATTGCGCGTTATGACAAATCGGGTGAACAGCATTACGAC
CTCGTTTCTGCCTTTATCAAATCGATTCGTGGTAGTGATCCGGATGCGGCTTTGTACTGGATGGCGCGGATGCTTAAAGG
CGGGGAAGATCCGGTTTTTATTGCAAGACGTATGTTGATTGCTGCTTCAGAAGACATTGGAAACTCGAATCCAAATGCAC
TATTGCTTGCAGGTGAATGTTTCCGTTCTGTACAGGCGGTGGGAATGCCTGAGGCTCGAATTATTTTGGGTCAAACAGCA
GTTTATTTAGCGACCAGTGCAAAAAGTAATAGTACTTACCTCGCAATTAATAAGGCCTTAGAACTTGCTGAGAAAACGGC
AAATTTACCAGTACCTTTACACTTGAGAAATGCGCCAACCAAACTGATGAAACAGCAAGGTTATGGAATTAATTATCTCT
ATCCTCATGACTACCCTGAGCACTTTGTACTGCAAGATTATTTGCCGCCTGAGTTAAAGGGAACCAAACTCTATGAGTCG
GCAAGAAACAAGCGTGAAGTTGAAGGTGAACGCCTACAACAACGCAGATGGCAGCAGGAACAATAG
ATGTCAGACACCCATATTCCACTTCCTGAACGCCTGCGCCCGAGAGACTTGTCTGAAATTATTGGGCAAGATCATTTGTT
AGGTGAACATGCGCCCTTACGTCAAATGATTGATCAGGGGCATTTGCCTTCTATTATTTTTTGGGGGCCGCCAGGCGTCG
GTAAAACGACAATTGCTTTGCTTTTAGCTCAGGCAATAGATCGTCCATTTGTGAGCTTATCTGCGCTGAATACGGGCGTA
AAAGAATTACGTGAAGTGATTGCAGAAAGTGGTGACTTACTGACACCTGTAGTTTTTATTGACGAAATCCATCGCTTTAA
TAAATCACAGCAAGATGCATTATTAGGTGCCGTAGAAAAAGGTAAAATTACCTTAATTGGCGCCACCACTGAAAACCCGT
CTTTTGAAGTCAATAGTGCACTTTTATCACGCTGTCAGGTCTATACCTTAAACAGTTTAGACAGTGAAGCAATTCAGATG
CTACTTAACAATGCACTCCAAAACGATAAATTTTTAAAAGAACGTTATATTCATATTGAAGAGTATGATGCTCTTTTACA
GTTTGCAGCAGGTGATGCCCGTAAAGCACTCAATTTACTTGACTTAATTGCAAGTACTTTTGAGCCCGAAGTTGAAAATA
CGATTAATAATGCGGTTGTAGTAAAAGTCGCTCAGCAAAATATTGCGCGTTATGACAAATCGGGTGAACAGCATTACGAC
CTCGTTTCTGCCTTTATCAAATCGATTCGTGGTAGTGATCCGGATGCGGCTTTGTACTGGATGGCGCGGATGCTTAAAGG
CGGGGAAGATCCGGTTTTTATTGCAAGACGTATGTTGATTGCTGCTTCAGAAGACATTGGAAACTCGAATCCAAATGCAC
TATTGCTTGCAGGTGAATGTTTCCGTTCTGTACAGGCGGTGGGAATGCCTGAGGCTCGAATTATTTTGGGTCAAACAGCA
GTTTATTTAGCGACCAGTGCAAAAAGTAATAGTACTTACCTCGCAATTAATAAGGCCTTAGAACTTGCTGAGAAAACGGC
AAATTTACCAGTACCTTTACACTTGAGAAATGCGCCAACCAAACTGATGAAACAGCAAGGTTATGGAATTAATTATCTCT
ATCCTCATGACTACCCTGAGCACTTTGTACTGCAAGATTATTTGCCGCCTGAGTTAAAGGGAACCAAACTCTATGAGTCG
GCAAGAAACAAGCGTGAAGTTGAAGGTGAACGCCTACAACAACGCAGATGGCAGCAGGAACAATAG
Similar proteins
Only experimentally validated proteins are listed.
| Protein | Organism | Identities (%) | Coverage (%) | Ha-value |
|---|---|---|---|---|
| rarA | Bacillus subtilis subsp. subtilis str. 168 |
39.303 |
95.487 |
0.375 |