Detailed information    

insolico Bioinformatically predicted

Overview

Name   letA   Type   Regulator
Locus tag   LO005_RS17205 Genome accession   NZ_CP087309
Coordinates   3590139..3590774 (+) Length   211 a.a.
NCBI ID   WP_000633799.1    Uniprot ID   A0AA36K8B3
Organism   Acinetobacter baumannii strain OC068     
Function   regulate competence development (predicted from homology)   
Competence regulation

Genomic Context

Location: 3585139..3595774
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  LO005_RS17185 - 3585215..3586030 (+) 816 WP_029424462.1 DsbC family protein -
  LO005_RS17190 - 3586275..3587576 (+) 1302 WP_000805827.1 homoserine dehydrogenase -
  LO005_RS17195 thrC 3587632..3588771 (+) 1140 WP_000063596.1 threonine synthase -
  LO005_RS17200 pbpG 3588880..3589926 (-) 1047 WP_001984577.1 D-alanyl-D-alanine endopeptidase PBP7/8 -
  LO005_RS17205 letA 3590139..3590774 (+) 636 WP_000633799.1 response regulator Regulator
  LO005_RS17210 pilS 3590785..3592353 (+) 1569 WP_032050112.1 PAS domain-containing sensor histidine kinase Regulator
  LO005_RS17215 - 3592378..3593799 (+) 1422 WP_031963979.1 sigma-54 dependent transcriptional regulator -
  LO005_RS17220 - 3593803..3594987 (-) 1185 WP_000939111.1 S41 family peptidase -

Sequence

Protein


Download         Length: 211 a.a.        Molecular weight: 23147.79 Da        Isoelectric Point: 5.0959

>NTDB_id=544904 LO005_RS17205 WP_000633799.1 3590139..3590774(+) (letA) [Acinetobacter baumannii strain OC068]
MITVLVVDDHELVRTGICRMLEDHADVEVIGQAESGEEAIAIVRQQHPQVVLLDVNMPGIGGVETTRRLLQTAPETKVIA
VSGLAEEPYPSLLLKAGAKGYITKGAPIAEMVRAINKVMQGGKYFSADIAEQLASSYLSDTQQSPFDSLSEREMQVAMMV
VNCISAQEIADKLFVSVKTVNTYRYRIFEKLGIDSDVKLTHLAIRYGLIKP

Nucleotide


Download         Length: 636 bp        

>NTDB_id=544904 LO005_RS17205 WP_000633799.1 3590139..3590774(+) (letA) [Acinetobacter baumannii strain OC068]
TTGATTACAGTTTTAGTTGTCGATGACCATGAACTGGTACGTACGGGTATTTGCCGTATGTTAGAAGATCATGCCGATGT
TGAGGTAATTGGACAAGCCGAATCGGGCGAAGAAGCAATTGCTATCGTTCGCCAACAACATCCGCAAGTCGTACTGCTGG
ATGTCAACATGCCGGGTATCGGTGGCGTAGAAACAACCCGTCGTTTATTACAGACGGCTCCAGAGACGAAAGTCATTGCT
GTAAGCGGCCTCGCCGAAGAGCCTTACCCATCTTTATTATTAAAAGCCGGTGCAAAAGGCTATATCACTAAAGGCGCGCC
AATTGCCGAAATGGTTCGTGCAATTAATAAGGTCATGCAAGGCGGTAAATATTTTAGTGCAGATATTGCCGAACAACTCG
CGAGCTCATATTTATCCGACACTCAACAATCCCCTTTTGATTCGTTATCGGAACGGGAAATGCAAGTTGCAATGATGGTC
GTCAACTGTATTAGCGCCCAAGAAATTGCCGATAAACTTTTTGTAAGTGTGAAAACTGTAAATACTTACCGTTATCGTAT
TTTTGAAAAGTTAGGAATTGATAGCGATGTAAAACTAACACATCTTGCGATTCGTTACGGTTTGATCAAGCCATAA

Domains

Predicted by InterProScan.

Response regulator receiver domain (Response_reg)

(4-116)

Bacterial regulatory proteins, luxR family (GerE)

(147-203)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure
  AlphaFold DB A0AA36K8B3

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  letA Legionella pneumophila str. Paris

55.238

99.526

0.55
  letA Legionella pneumophila strain ERS1305867

55.238

99.526

0.55