Detailed information NTG0542386

Bioinformatically predicted

Overview

• Name: amiE
• Type: Regulator
• Locus tag: LNN51_RS00880
• Genome accession: NZ_CP086490
• Coordinates: 183203..184207 (+)
• Length: 334 a.a.
• NCBI ID: WP_039023208.1
• Uniprot ID: -
• Organism: Escherichia coli strain Ec-050-T5-ESBL
• Function: internalize XIP (predicted from homology) Competence regulation

Genomic Context

Location: 178203..189207

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
LNN51_RS00860 (LNN51_00860)	dppA	178366..179973 (+)	1608	WP_001222883.1	dipeptide ABC transporter substrate-binding protein DppA	-
LNN51_RS26210	-	180007..180117 (-)	111	Protein_170	hypothetical protein	-
LNN51_RS00865 (LNN51_00865)	dppB	180281..181300 (+)	1020	WP_000938855.1	dipeptide ABC transporter permease DppB	-
LNN51_RS00870 (LNN51_00870)	dppC	181310..182212 (+)	903	WP_000084677.1	dipeptide ABC transporter permease DppC	-
LNN51_RS00875 (LNN51_00875)	amiE	182223..183206 (+)	984	WP_001196486.1	dipeptide ABC transporter ATP-binding protein	Regulator
LNN51_RS00880 (LNN51_00880)	amiE	183203..184207 (+)	1005	WP_039023208.1	dipeptide ABC transporter ATP-binding subunit DppF	Regulator
LNN51_RS00885 (LNN51_00885)	yhjV	184237..185508 (-)	1272	WP_001295225.1	aromatic amino acid transport family protein	-
LNN51_RS00890 (LNN51_00890)	ldrD	185984..186091 (+)	108	WP_000141634.1	type I toxin-antitoxin system toxic polypeptide LdrD	-
LNN51_RS00895 (LNN51_00895)	bcsG	186178..187857 (-)	1680	WP_000191619.1	cellulose biosynthesis protein BcsG	-
LNN51_RS00900 (LNN51_00900)	bcsF	187854..188045 (-)	192	WP_000988308.1	cellulose biosynthesis protein BcsF	-

Sequence

Protein

• Length: 334 a.a.
• Molecular weight: 37507.38 Da
• Isoelectric Point: 8.7508

>NTDB_id=542386 LNN51_RS00880 WP_039023208.1 183203..184207(+) (amiE) [Escherichia coli strain Ec-050-T5-ESBL]
MSTQEATLQQPLLQAIDLKKHYPVKKGMFAPERLVKALDGVSFNLERGKTLAVVGESGCGKSTLGRLLTMIEMPTGGELY
YQGQDLLKHDPQAQKLRRQKIQIVFQNPYGSLNPRKKVGQILEEPLLINTSLSKEQRREKALSMMAKVGLKTEHYDRYPH
MFSGGQRQRIAIARGLMLDPDVVIADEPVSALDVSVRAQVLNLMMDLQQELGLSYVFISHDLSVVEHIADEVMVMYLGRC
VEKGTKDQIFNNPCHPYTQALLSATPRLNPDDRRERIKLSGELPSPLNPPPGCAFNARCRRRFGPCTQLQPQLKDYGGQL
VACFAVDQDENPQR

Nucleotide

• Length: 1005 bp

>NTDB_id=542386 LNN51_RS00880 WP_039023208.1 183203..184207(+) (amiE) [Escherichia coli strain Ec-050-T5-ESBL]
ATGAGTACGCAAGAGGCCACCCTGCAACAACCGCTGTTGCAGGCTATCGACCTGAAAAAACATTATCCGGTGAAGAAAGG
CATGTTCGCGCCGGAACGTCTGGTTAAAGCGCTGGATGGCGTTTCGTTTAACCTTGAACGTGGCAAAACGCTGGCAGTAG
TGGGCGAATCTGGCTGCGGTAAATCGACCCTCGGTCGGTTGCTGACGATGATTGAAATGCCCACCGGTGGCGAGCTGTAT
TACCAGGGGCAGGATCTGCTTAAGCACGATCCGCAGGCGCAGAAGCTGCGTCGGCAGAAAATCCAGATCGTCTTCCAGAA
CCCTTACGGTTCGCTGAATCCGCGTAAAAAAGTCGGGCAAATTCTTGAAGAGCCGCTGCTGATCAACACCAGCTTAAGCA
AAGAACAGCGTCGGGAAAAAGCCCTGTCGATGATGGCGAAAGTCGGCCTGAAAACCGAGCACTATGACCGCTATCCGCAT
ATGTTCTCCGGCGGTCAGCGTCAGCGTATCGCCATCGCCCGTGGTCTGATGCTCGACCCGGATGTGGTGATTGCCGATGA
ACCGGTTTCCGCGCTGGATGTTTCAGTGCGCGCGCAGGTGCTGAATCTGATGATGGATTTGCAGCAGGAGTTGGGGCTGT
CTTATGTCTTTATCTCCCACGACCTGTCGGTGGTGGAGCACATTGCTGATGAAGTGATGGTGATGTACCTGGGCCGCTGC
GTGGAGAAGGGAACGAAAGACCAAATCTTCAATAACCCGTGCCATCCGTACACTCAGGCGCTACTTTCCGCGACGCCGCG
CCTGAACCCGGACGATCGCCGCGAGCGCATCAAGCTCAGCGGTGAACTACCAAGCCCACTGAATCCACCGCCGGGTTGCG
CCTTCAACGCCCGCTGTCGTCGGCGCTTCGGCCCCTGCACCCAGTTGCAGCCGCAGCTAAAAGACTACGGCGGTCAACTG
GTAGCTTGTTTTGCTGTTGATCAGGATGAAAATCCGCAGCGTTAA

Domains

Predicted by InterProScan.

• Oligopeptide/dipeptide transporter, C-terminal region (oligo_HPY) (241-306)

• ABC transporter (ABC_tran) (38-189)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
amiE	Streptococcus salivarius strain HSISS4	40.878	88.623	0.362