Detailed information NTG0539323

Bioinformatically predicted

Overview

• Name: rarA
• Type: Machinery gene
• Locus tag: LK420_RS02280
• Genome accession: NZ_CP085949
• Coordinates: 481666..483006 (+)
• Length: 446 a.a.
• NCBI ID: WP_021035303.1
• Uniprot ID: -
• Organism: Haemophilus influenzae strain FDAARGOS_1562
• Function: homologous recombination (predicted from homology) Homologous recombination

Genomic Context

Location: 476666..488006

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
LK420_RS02265 (LK420_02265)	lrp	477730..478209 (+)	480	WP_005653255.1	leucine-responsive transcriptional regulator Lrp	-
LK420_RS02270 (LK420_02270)	-	478211..480970 (+)	2760	WP_021035305.1	DNA translocase FtsK	-
LK420_RS02275 (LK420_02275)	lolA	480988..481605 (+)	618	WP_021035304.1	outer membrane lipoprotein chaperone LolA	-
LK420_RS02280 (LK420_02280)	rarA	481666..483006 (+)	1341	WP_021035303.1	replication-associated recombination protein A	Machinery gene
LK420_RS02285 (LK420_02285)	aroA	483092..484390 (-)	1299	WP_021035302.1	3-phosphoshikimate 1-carboxyvinyltransferase	-
LK420_RS02290 (LK420_02290)	purU	484390..485226 (-)	837	WP_021035301.1	formyltetrahydrofolate deformylase	-
LK420_RS02295 (LK420_02295)	-	485297..485701 (-)	405	WP_021035300.1	H-NS family nucleoid-associated regulatory protein	-
LK420_RS02300 (LK420_02300)	-	486152..487672 (+)	1521	WP_021035299.1	Na+/H+ antiporter NhaC family protein	-

Sequence

Protein

• Length: 446 a.a.
• Molecular weight: 50236.11 Da
• Isoelectric Point: 6.7098

>NTDB_id=539323 LK420_RS02280 WP_021035303.1 481666..483006(+) (rarA) [Haemophilus influenzae strain FDAARGOS_1562]
MSNLNFDFAENDFRPLAARMRPTSLEQYFGQSHLIGEGKPLRKAIQAGHIHSMILWGPPGTGKTTLAEIIAQRINAEVER
ISAVTSGIKEIREAIDRAKQNRLADRKTILFVDEVHRFNKSQQDAFLPHIEDGTVIFIGATTENPSFELNNALLSRARVY
VLKSLTTAEIEQVLQQAVEDPKRGLGKERLILEENLLQVLAEYVNGDARLALNCLELMVDMADETENGKKIDRTLLKEVL
GERQARFDKQGDRFYDLISALHKSVRGSAPDAALYWYARILTAGGDPLYVVRRLLAIASEDVGNADPRAMQVALAAWDCF
TRVGAYEGERAIAQAIIYLAVAPKSNAVYTAFNTAKQQAKDLPDYDVPPHLRNAPTNLMKELGYGAEYRYAHDEPNAYAA
GENYFPSELKDTQYYFPTNRGMEIQIKEKLERLREQDKSAVKKRYK

Nucleotide

• Length: 1341 bp

>NTDB_id=539323 LK420_RS02280 WP_021035303.1 481666..483006(+) (rarA) [Haemophilus influenzae strain FDAARGOS_1562]
ATGTCGAACCTCAATTTTGATTTTGCCGAAAATGATTTTCGCCCACTGGCGGCAAGAATGCGTCCAACGAGTCTAGAGCA
GTATTTTGGGCAAAGCCATTTAATTGGCGAGGGCAAACCACTGCGAAAAGCGATTCAAGCTGGACATATTCATTCAATGA
TTTTGTGGGGGCCACCAGGTACGGGAAAAACGACCCTTGCAGAAATTATTGCGCAACGTATTAATGCAGAAGTAGAGCGA
ATTTCTGCAGTGACGAGTGGTATCAAAGAAATTAGAGAAGCGATTGATCGTGCAAAACAAAATCGTCTTGCAGATCGTAA
AACTATCTTGTTTGTGGATGAAGTCCATCGTTTTAATAAAAGCCAGCAAGATGCATTTTTACCACACATTGAAGACGGAA
CGGTTATTTTTATTGGGGCGACAACAGAAAATCCCTCTTTTGAGCTAAATAATGCGTTGCTTTCTCGTGCGCGAGTGTAT
GTACTGAAATCACTTACGACGGCTGAAATTGAACAAGTTTTGCAGCAAGCTGTAGAAGATCCTAAACGTGGATTGGGTAA
AGAGCGGTTAATTTTAGAAGAGAATTTACTGCAAGTGCTTGCCGAATATGTTAATGGGGATGCTCGATTAGCCTTGAATT
GTCTCGAATTAATGGTGGATATGGCAGATGAAACCGAAAATGGAAAGAAAATTGACCGCACTTTATTAAAAGAAGTCTTA
GGTGAACGCCAAGCGAGATTTGATAAACAAGGCGATCGTTTCTATGATTTAATTTCTGCGCTACATAAATCTGTCCGAGG
TTCTGCTCCAGATGCTGCGCTGTATTGGTATGCAAGAATTTTAACGGCAGGTGGAGATCCTCTATATGTCGTGCGTCGAT
TACTTGCCATTGCTTCAGAAGATGTGGGAAATGCAGATCCTCGCGCTATGCAAGTTGCATTGGCTGCTTGGGATTGCTTT
ACTCGAGTGGGGGCTTATGAAGGGGAGCGTGCCATTGCCCAAGCCATCATTTATCTTGCGGTTGCTCCAAAAAGTAATGC
AGTTTATACGGCGTTTAATACTGCAAAACAGCAAGCGAAAGATTTACCCGATTACGATGTTCCCCCACATTTACGCAATG
CGCCGACTAATTTAATGAAAGAGCTTGGCTATGGTGCTGAATATCGTTATGCCCACGATGAACCTAACGCTTATGCGGCA
GGCGAAAATTATTTCCCATCAGAATTAAAAGATACTCAATATTATTTTCCGACGAATAGAGGTATGGAAATTCAGATTAA
GGAAAAACTAGAACGTTTACGTGAGCAAGATAAAAGTGCGGTGAAAAAACGGTATAAATAA

Domains

Predicted by InterProScan.

• ATPase family associated with various cellular activities (AAA) (AAA) (53-159)

• MgsA AAA+ ATPase C terminal (MgsA_C) (267-433)

• AAA C-terminal domain (AAA_assoc_2) (188-266)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
rarA	Bacillus subtilis subsp. subtilis str. 168	39.243	94.843	0.372