Detailed information NTG0539269

Bioinformatically predicted

Overview

• Name: recD2
• Type: Machinery gene
• Locus tag: JVX94_RS01780
• Genome accession: NZ_CP070345
• Coordinates: 339726..342110 (+)
• Length: 794 a.a.
• NCBI ID: WP_205184378.1
• Uniprot ID: -
• Organism: Bacillus sp. PDNC022
• Function: homologous recombination (predicted from homology) Homologous recombination

Genomic Context

Location: 334726..347110

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
JVX94_RS01760 (JVX94_01760)	-	336199..336618 (+)	420	WP_024423125.1	Rrf2 family transcriptional regulator	-
JVX94_RS01765 (JVX94_01765)	-	336637..337779 (+)	1143	WP_111292117.1	cysteine desulfurase family protein	-
JVX94_RS01770 (JVX94_01770)	mnmA	337874..338992 (+)	1119	WP_205184376.1	tRNA 2-thiouridine(34) synthase MnmA	-
JVX94_RS01775 (JVX94_01775)	-	339053..339706 (+)	654	WP_025092425.1	tetratricopeptide repeat protein	-
JVX94_RS01780 (JVX94_01780)	recD2	339726..342110 (+)	2385	WP_205184378.1	ATP-dependent RecD-like DNA helicase	Machinery gene
JVX94_RS01785 (JVX94_01785)	-	342184..342702 (+)	519	WP_095409171.1	PRC-barrel domain-containing protein	-
JVX94_RS01790 (JVX94_01790)	-	342716..342907 (+)	192	WP_003216308.1	hypothetical protein	-
JVX94_RS01795 (JVX94_01795)	-	342928..343059 (+)	132	WP_003216198.1	YrzQ family protein	-
JVX94_RS01800 (JVX94_01800)	-	343139..343789 (-)	651	WP_024427867.1	amino acid ABC transporter permease	-
JVX94_RS01805 (JVX94_01805)	-	343805..344458 (-)	654	WP_144471224.1	amino acid ABC transporter permease	-
JVX94_RS01810 (JVX94_01810)	-	344536..345345 (-)	810	WP_197198303.1	transporter substrate-binding domain-containing protein	-
JVX94_RS01815 (JVX94_01815)	-	345359..346087 (-)	729	WP_048238982.1	amino acid ABC transporter ATP-binding protein	-

Sequence

Protein

• Length: 794 a.a.
• Molecular weight: 89046.57 Da
• Isoelectric Point: 5.2068

>NTDB_id=539269 JVX94_RS01780 WP_205184378.1 339726..342110(+) (recD2) [Bacillus sp. PDNC022]
MQEHPDQMKLEDEPFLKGTIQAVIFHNESNLYSVLKVKVIETSENLEEKTASVTGYFPALHEEETYTFYGKVTSHPKFGE
QFQATHFQKEVPTTKQGIIHYLSSDLFEGIGKKTAEEIVGQLGSQTLHKIMRDPAVLYDVPRLSKKKADKLAAALQEHQG
LEQIMISLNQYGFGPQLSMKIYQVYESETLQKIEENPYQLVKDVEGIGFIKADELGARTGISGNDPERIRAALLYTVETA
SLQDGHTYIQTKDLIVETRKLLNQTGNDYKVTEMDVANQIIALGEGKEMIIEDDRCYHPSLFYAEQSVAKRIQKIVSQTE
YADQFPESEFLLALGELEERLGVQYAPTQKEAIQKALMSPMLLLTGGPGTGKTTVIKGIVELYSDLHGVSLDPSDYKKDE
SFPFVLAAPTGRAAKRMTESTGLPAVTIHRLLGWNGSEGFSHDEEQPIEGKLVIIDESSMLDIWLANHLFKAIPDHIQVI
MVGDEHQLPSVGPGQVLRDLLASKAVPAVTLTDIYRQADGSTIVELAHDMKNGVLPKDITARSKDRSFIQCSADQMKEVI
EKVVSNAAQKGFSAKDIQVLAPMYKGKAGINELNKMLQHILNPKKPKGREIPFGDVVYRTGDKVLQLVNQPENNIFNGDI
GEIVSIFYAKENTEKEDMAVISFDGNEITFTKKDFHQFTHAYCCSIHKSQGSEFPIVVLPVVRSYYRMLRRNLLYTAITR
SKKFLILCGEESALEWGVKNNEDSLRQTSLTMRLVQTEQIMDAELEALQKELPFSVHDANIGMEGITPFDFMHE

Nucleotide

• Length: 2385 bp

>NTDB_id=539269 JVX94_RS01780 WP_205184378.1 339726..342110(+) (recD2) [Bacillus sp. PDNC022]
GTGCAGGAACATCCAGATCAAATGAAGCTTGAGGACGAACCGTTTTTAAAGGGGACCATTCAAGCCGTTATTTTCCATAA
TGAAAGTAATTTATACTCGGTGTTAAAGGTGAAAGTCATTGAAACATCGGAAAACTTAGAGGAAAAAACAGCATCTGTCA
CAGGCTACTTCCCAGCACTTCATGAGGAGGAAACCTACACCTTCTATGGCAAAGTCACAAGCCACCCGAAATTTGGTGAA
CAGTTTCAGGCCACTCATTTTCAAAAGGAAGTGCCGACAACGAAGCAAGGAATCATTCATTATCTCTCAAGTGATTTATT
TGAGGGGATAGGGAAAAAGACGGCTGAAGAAATCGTGGGGCAGCTTGGCAGTCAGACGCTCCATAAAATTATGCGTGACC
CAGCTGTTTTGTATGATGTTCCGCGCTTATCAAAAAAGAAGGCGGATAAGCTGGCCGCAGCGCTTCAGGAGCATCAAGGG
CTGGAACAAATTATGATCAGCCTGAATCAATATGGCTTTGGTCCACAGCTCAGTATGAAGATTTACCAAGTGTATGAAAG
TGAAACGCTGCAGAAAATCGAGGAAAATCCCTATCAGCTCGTTAAGGATGTCGAAGGAATCGGATTTATTAAGGCGGATG
AGCTTGGCGCTAGAACAGGGATCTCAGGAAATGACCCAGAGCGGATTCGTGCCGCCTTGCTATATACAGTGGAGACAGCT
AGTCTTCAGGACGGTCATACGTACATACAAACAAAAGATTTGATCGTCGAAACCCGCAAACTGCTCAACCAAACAGGTAA
TGATTACAAAGTGACTGAAATGGATGTCGCCAATCAGATCATTGCACTTGGCGAAGGAAAAGAAATGATCATTGAAGACG
ACCGCTGCTATCATCCATCCTTATTTTATGCGGAGCAAAGTGTCGCCAAACGCATTCAAAAAATCGTCTCCCAAACAGAA
TATGCAGATCAATTTCCTGAATCAGAATTTCTGCTTGCACTTGGGGAGCTGGAGGAGCGGTTAGGCGTTCAGTATGCACC
GACACAAAAGGAAGCGATTCAAAAGGCACTCATGTCCCCGATGCTGCTTTTAACAGGCGGGCCTGGAACAGGGAAGACAA
CAGTCATTAAAGGGATTGTCGAGCTTTACAGTGATCTTCACGGTGTATCTCTTGATCCGAGTGATTATAAAAAAGATGAA
TCGTTCCCATTTGTACTTGCGGCACCAACTGGACGGGCGGCTAAACGGATGACAGAATCAACAGGGCTTCCAGCTGTCAC
CATTCACCGGCTGCTAGGCTGGAACGGTTCGGAGGGCTTCTCGCATGATGAGGAACAGCCAATTGAAGGAAAGCTTGTCA
TCATTGATGAATCAAGTATGCTGGATATTTGGCTTGCGAATCATTTGTTTAAAGCGATTCCTGATCATATTCAAGTGATT
ATGGTAGGGGATGAACATCAGCTGCCTTCTGTCGGACCAGGCCAAGTTTTACGGGATTTGCTTGCCTCAAAAGCCGTGCC
GGCTGTTACCTTGACAGATATTTACCGGCAGGCAGACGGCTCAACCATTGTTGAACTTGCACATGATATGAAAAATGGTG
TGCTGCCAAAAGATATTACTGCACGCTCAAAGGATCGGTCCTTCATTCAGTGTTCAGCTGATCAAATGAAAGAAGTCATT
GAGAAAGTCGTCAGCAATGCTGCTCAAAAAGGGTTTTCAGCAAAGGACATTCAAGTGCTGGCACCGATGTATAAAGGAAA
AGCAGGCATCAATGAGCTCAACAAAATGCTGCAGCACATTTTGAATCCTAAAAAACCAAAAGGCAGAGAAATCCCGTTTG
GTGATGTGGTGTACCGGACAGGTGATAAGGTGCTTCAGCTTGTGAATCAGCCGGAGAACAACATTTTTAACGGTGATATC
GGCGAAATTGTCTCGATTTTTTATGCAAAAGAAAATACAGAAAAAGAAGACATGGCCGTCATCTCCTTTGATGGAAATGA
AATCACCTTTACGAAAAAGGATTTTCATCAATTTACACACGCCTATTGCTGCTCCATTCACAAATCACAAGGCAGTGAAT
TCCCAATTGTTGTCCTGCCAGTCGTGAGAAGCTACTACCGAATGCTTCGGCGGAATCTGCTGTACACAGCCATTACACGC
AGTAAAAAGTTTTTAATACTGTGCGGCGAGGAATCAGCGCTGGAGTGGGGCGTGAAAAACAATGAGGATTCCCTCAGACA
AACGTCCTTAACGATGCGGCTCGTGCAAACCGAACAAATCATGGATGCTGAACTTGAAGCGCTCCAAAAAGAGCTTCCGT
TTAGCGTACATGACGCAAATATTGGCATGGAGGGAATCACTCCGTTTGATTTTATGCATGAGTAG

Domains

Predicted by InterproScan.

• AAA domain (AAA_30) (345-553)

• Helix-hairpin-helix containing domain (HHH_RecD2) (157-248)

• ATP-dependent RecD-like DNA helicase SH3 domain (SH3_13) (593-659)

• UvrD-like helicase C-terminal domain (UvrD_C_2) (680-728)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
recD2	Bacillus subtilis subsp. subtilis str. 168	79.648	100	0.798