Detailed information NTG0538239

Bioinformatically predicted

Overview

• Name: rarA
• Type: Machinery gene
• Locus tag: LJA35_RS30240
• Genome accession: NZ_CP085300
• Coordinates: 6727453..6728808 (+)
• Length: 451 a.a.
• NCBI ID: WP_165285191.1
• Uniprot ID: -
• Organism: Streptomyces sp. BSE6.1
• Function: homologous recombination (predicted from homology) Homologous recombination

Genomic Context

Location: 6722453..6733808

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
LJA35_RS30220	-	6723517..6724353 (-)	837	WP_102927926.1	peptidylprolyl isomerase	-
LJA35_RS30225	-	6724537..6725253 (+)	717	WP_233647242.1	MBL fold metallo-hydrolase	-
LJA35_RS30230	hisS	6725265..6726527 (+)	1263	WP_102927924.1	histidine--tRNA ligase	-
LJA35_RS30235	-	6726721..6727383 (+)	663	WP_233647243.1	vitamin K epoxide reductase family protein	-
LJA35_RS30240	rarA	6727453..6728808 (+)	1356	WP_165285191.1	replication-associated recombination protein A	Machinery gene
LJA35_RS30245	rpsD	6729104..6729718 (+)	615	WP_030185023.1	30S ribosomal protein S4	-
LJA35_RS30250	-	6729750..6731945 (-)	2196	WP_233647244.1	AAA family ATPase	-
LJA35_RS30255	-	6732113..6732562 (+)	450	WP_102930884.1	DUF948 domain-containing protein	-
LJA35_RS30260	-	6732570..6732932 (+)	363	WP_102930885.1	DUF6167 family protein	-

Sequence

Protein

• Length: 451 a.a.
• Molecular weight: 48134.50 Da
• Isoelectric Point: 6.4503

>NTDB_id=538239 LJA35_RS30240 WP_165285191.1 6727453..6728808(+) (rarA) [Streptomyces sp. BSE6.1]
MEPDLFTAAAEERQEKDPTGSPLAVRMRPRTLDEVVGQQHLLKPGSPLRRLVGEGASGPAGPSSVILWGPPGTGKTTLAY
VVSKATNKRFVELSAITAGVKEVRAVIDGARRAVGGYGKETVLFLDEIHRFSKAQQDSLLPAVENRWVTLIAATTENPYF
SVISPLLSRSLLLTLEPLTDDDLRGLLRRALTDERGLKGALALPEDTEEHLLRIAGGDARRALTALEAAAGAALDKGETE
IGLTTLEETVDRAAVKYDRDGDQHYDVASALIKSIRGSDVDAALHYLARMIEAGEDPRFIARRLMISASEDIGLADPNAL
QIAVAAAQAVAMIGFPEASLTLSHATIALALAPKSNAATTAIGAALDDVRKGHAGPVPAHLRDSHYKGAGKLGHGQGYVY
PHDLPEGIAAQQYAPDGLKDRTYYTPTRHGAEARYADAVEWTRGHLGRKPS

Nucleotide

• Length: 1356 bp

>NTDB_id=538239 LJA35_RS30240 WP_165285191.1 6727453..6728808(+) (rarA) [Streptomyces sp. BSE6.1]
GTGGAGCCCGACCTGTTCACCGCCGCAGCCGAAGAACGCCAGGAGAAGGACCCGACCGGCAGCCCCCTCGCCGTGCGGAT
GCGCCCGCGCACCCTCGACGAGGTCGTGGGCCAGCAGCACCTGCTCAAGCCCGGATCCCCCCTGCGCCGCCTGGTCGGCG
AGGGCGCGTCCGGCCCCGCGGGGCCGTCCTCGGTCATCCTCTGGGGCCCGCCGGGCACCGGCAAGACCACCCTGGCGTAC
GTCGTCTCCAAGGCCACCAACAAGCGGTTCGTGGAGCTGTCGGCGATCACCGCGGGCGTCAAGGAGGTCCGCGCGGTCAT
CGACGGCGCCCGCCGCGCCGTCGGCGGGTACGGCAAGGAGACCGTCCTCTTCCTCGACGAGATCCACCGCTTCAGCAAGG
CCCAGCAGGACTCCCTGCTCCCGGCCGTCGAGAACCGCTGGGTCACCCTGATCGCCGCCACCACCGAGAACCCGTACTTC
TCGGTGATCTCCCCACTGCTCTCCCGCTCCCTCCTGCTCACCCTCGAACCCCTCACCGACGACGACCTCCGGGGCCTGCT
GCGCCGCGCCCTGACCGACGAGCGGGGCCTCAAGGGCGCCCTCGCCCTCCCCGAGGACACCGAGGAGCACCTGCTGCGCA
TCGCCGGCGGCGACGCCCGGCGCGCGCTGACCGCGCTGGAGGCCGCCGCCGGGGCCGCGCTCGACAAGGGCGAGACGGAG
ATCGGCCTGACCACGCTGGAGGAGACGGTCGACCGGGCCGCGGTGAAGTACGACCGCGACGGCGACCAGCACTACGACGT
CGCCAGCGCCCTGATCAAGTCCATCCGCGGCTCCGACGTCGACGCCGCCCTGCACTACCTGGCCCGGATGATCGAGGCCG
GCGAGGACCCCCGCTTCATCGCCCGGCGCCTGATGATCTCCGCCAGCGAGGACATCGGCCTCGCCGATCCGAACGCGCTG
CAGATCGCCGTCGCCGCCGCCCAGGCCGTCGCCATGATCGGCTTCCCCGAGGCCTCCCTCACCCTCAGCCACGCCACCAT
CGCCCTGGCCCTGGCCCCCAAGTCCAACGCGGCGACCACCGCCATCGGCGCCGCCCTGGACGACGTGCGCAAGGGCCACG
CCGGCCCGGTCCCCGCACACCTGCGCGACAGCCACTACAAGGGCGCCGGCAAGCTGGGGCACGGCCAGGGGTACGTGTAC
CCGCACGACCTGCCCGAGGGCATCGCCGCCCAGCAGTACGCGCCGGACGGGCTCAAGGACCGCACGTACTACACGCCGAC
CCGGCACGGCGCCGAGGCCCGGTACGCGGACGCCGTGGAGTGGACCCGCGGGCACCTCGGTCGCAAGCCGTCCTGA

Domains

Predicted by InterProScan.

• ATPase family associated with various cellular activities (AAA) (AAA) (65-169)

• AAA C-terminal domain (AAA_assoc_2) (199-276)

• MgsA AAA+ ATPase C terminal (MgsA_C) (277-441)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
rarA	Bacillus subtilis subsp. subtilis str. 168	45.521	91.574	0.417