Detailed information NTG0537641

Bioinformatically predicted

Overview

• Name: rarA
• Type: Machinery gene
• Locus tag: LIN94_RS09465
• Genome accession: NZ_CP085092
• Coordinates: 1925044..1926384 (-)
• Length: 446 a.a.
• NCBI ID: WP_005568320.1
• Uniprot ID: -
• Organism: Aggregatibacter actinomycetemcomitans strain 30R
• Function: homologous recombination (predicted from homology) Homologous recombination

Genomic Context

Location: 1920044..1931384

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
LIN94_RS09450	cdd	1920281..1921177 (+)	897	WP_005547383.1	cytidine deaminase	-
LIN94_RS09455	serS	1921256..1922572 (-)	1317	WP_005567230.1	serine--tRNA ligase	-
LIN94_RS09460	-	1922880..1924547 (+)	1668	WP_025298503.1	anaerobic C4-dicarboxylate transporter	-
LIN94_RS09465	rarA	1925044..1926384 (-)	1341	WP_005568320.1	replication-associated recombination protein A	Machinery gene
LIN94_RS09470	lolA	1926397..1927014 (-)	618	WP_005540265.1	outer membrane lipoprotein chaperone LolA	-
LIN94_RS09475	-	1927107..1929851 (-)	2745	WP_025298504.1	DNA translocase FtsK	-
LIN94_RS09480	lrp	1929855..1930334 (-)	480	WP_005540269.1	leucine-responsive transcriptional regulator Lrp	-

Sequence

Protein

• Length: 446 a.a.
• Molecular weight: 49727.69 Da
• Isoelectric Point: 6.3254

>NTDB_id=537641 LIN94_RS09465 WP_005568320.1 1925044..1926384(-) (rarA) [Aggregatibacter actinomycetemcomitans strain 30R]
MSNFSFDFNENDFRPLAARMRPTTLAQYCGQSHLLGEGKPLRKAIEAGYVHSMIFWGPPGTGKTTLAEIIAHRINVEVER
ISAVTSGIKEIREAIDKAKQNKLAGLRTILFVDEVHRFNKSQQDAFLPHIEDGTIIFIGATTENPSFELNNALLSRARVY
ILKPLSAQEIEQVLQQAIDDPENGLGKVRLNLQENLLSLLAEYVNGDARLALNCLEMMVDMAGESENGKILDRTLLTEVL
GERQARFDKQGDLFYDFISALHKSIRGSAPDAALYWYARIITAGGDPLYVARRLLAIASEDVGNADPRAMQVALAAWDCF
TRVGAAEGERAIAQAIVYLAVAPKSNAVYLAFKAAKKLATESADFDVPEHLRNAPTSFMKDLGFGAEYRYAHNEPNAYAA
GENYFPPQLKDTQFYFPTTRGMEIKIKEKLEWLRGLDQESGKKRYK

Nucleotide

• Length: 1341 bp

>NTDB_id=537641 LIN94_RS09465 WP_005568320.1 1925044..1926384(-) (rarA) [Aggregatibacter actinomycetemcomitans strain 30R]
ATGTCTAACTTCAGCTTTGATTTCAACGAAAATGACTTTCGCCCGCTTGCTGCAAGAATGCGCCCCACCACCTTGGCGCA
ATATTGCGGTCAGTCTCATTTATTGGGCGAAGGAAAACCGTTGCGCAAAGCTATTGAAGCGGGATATGTTCATTCCATGA
TTTTCTGGGGCCCGCCCGGCACCGGTAAAACCACCTTGGCGGAAATTATCGCCCATCGCATTAATGTGGAAGTAGAGCGC
ATTTCCGCCGTCACCAGCGGCATTAAAGAAATCCGTGAAGCCATCGACAAAGCCAAACAAAACAAACTGGCAGGTTTGCG
CACCATTTTGTTTGTAGATGAAGTGCATCGTTTCAACAAAAGCCAGCAAGACGCTTTCCTGCCGCATATTGAAGACGGCA
CCATTATTTTTATCGGCGCTACCACGGAAAATCCCTCTTTTGAACTCAATAACGCGTTGCTTTCCCGCGCGCGGGTTTAT
ATTCTAAAACCGCTTTCCGCGCAGGAAATCGAACAGGTTTTACAACAAGCCATAGATGACCCCGAAAACGGTTTGGGTAA
AGTGCGGTTAAATTTACAAGAGAATTTATTGTCCCTGTTGGCAGAATACGTCAATGGCGACGCCCGTCTTGCTTTGAACT
GCCTGGAAATGATGGTGGACATGGCGGGCGAATCGGAAAACGGCAAAATTTTAGACCGCACTTTACTCACGGAAGTGTTG
GGCGAACGGCAGGCGCGTTTTGATAAACAAGGTGACCTTTTCTACGATTTCATTTCCGCACTGCACAAATCCATTCGCGG
ATCCGCCCCTGATGCGGCGTTATACTGGTACGCGCGCATTATCACTGCCGGCGGGGATCCTCTTTATGTGGCACGTCGAT
TATTGGCAATTGCTTCCGAAGATGTGGGCAACGCCGACCCGCGCGCCATGCAGGTGGCACTTGCCGCCTGGGATTGTTTC
ACCCGCGTCGGCGCTGCCGAAGGCGAACGCGCTATTGCGCAAGCCATTGTGTATTTAGCCGTCGCACCGAAAAGCAACGC
CGTTTATCTCGCTTTCAAAGCCGCCAAAAAATTGGCAACCGAATCCGCCGATTTCGACGTCCCTGAACATCTCCGCAACG
CCCCGACCAGCTTCATGAAAGACCTCGGCTTCGGCGCCGAATACCGCTACGCCCACAATGAACCTAACGCCTACGCTGCC
GGCGAAAACTACTTCCCGCCACAACTGAAAGACACCCAATTCTATTTCCCGACCACCAGAGGCATGGAAATTAAGATTAA
GGAGAAGTTGGAATGGCTGCGGGGGTTAGATCAGGAAAGTGGTAAGAAGCGATATAAATAG

Domains

Predicted by InterProScan.

• ATPase family associated with various cellular activities (AAA) (AAA) (53-163)

• MgsA AAA+ ATPase C terminal (MgsA_C) (267-433)

• AAA C-terminal domain (AAA_assoc_2) (189-266)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
rarA	Bacillus subtilis subsp. subtilis str. 168	40.146	92.152	0.37