Detailed information NTG0537241

Bioinformatically predicted

Overview

• Name: uvrA
• Type: Machinery gene
• Locus tag: LIO31_RS08520
• Genome accession: NZ_CP085086
• Coordinates: 1690219..1693044 (-)
• Length: 941 a.a.
• NCBI ID: WP_023371429.1
• Uniprot ID: -
• Organism: Streptococcus suis strain Ssuis_MA6
• Function: homologous recombination (predicted from homology) Homologous recombination

Genomic Context

Location: 1685219..1698044

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
LIO31_RS08495	-	1686565..1687530 (+)	966	WP_002942449.1	LacI family DNA-binding transcriptional regulator	-
LIO31_RS08500	nusB	1687609..1688028 (-)	420	WP_023371427.1	transcription antitermination factor NusB	-
LIO31_RS08505	-	1688018..1688410 (-)	393	WP_015647326.1	Asp23/Gls24 family envelope stress response protein	-
LIO31_RS08510	efp	1688438..1688995 (-)	558	WP_002942436.1	elongation factor P	-
LIO31_RS08515	-	1689059..1690120 (-)	1062	WP_074389745.1	Xaa-Pro peptidase family protein	-
LIO31_RS08520	uvrA	1690219..1693044 (-)	2826	WP_023371429.1	excinuclease ABC subunit UvrA	Machinery gene
LIO31_RS08525	-	1693550..1694494 (+)	945	WP_002939248.1	magnesium transporter CorA family protein	-
LIO31_RS08530	-	1694510..1695166 (+)	657	WP_002939249.1	DUF1129 domain-containing protein	-
LIO31_RS08535	rpsR	1695550..1695789 (-)	240	WP_002939250.1	30S ribosomal protein S18	-
LIO31_RS08540	ssbA	1695822..1696316 (-)	495	WP_002942409.1	single-stranded DNA-binding protein	Machinery gene
LIO31_RS08545	rpsF	1696328..1696618 (-)	291	WP_002942403.1	30S ribosomal protein S6	-
LIO31_RS08550	-	1696790..1697779 (-)	990	WP_023371431.1	lipoate--protein ligase	-

Sequence

Protein

• Length: 941 a.a.
• Molecular weight: 103853.18 Da
• Isoelectric Point: 6.3001

>NTDB_id=537241 LIO31_RS08520 WP_023371429.1 1690219..1693044(-) (uvrA) [Streptococcus suis strain Ssuis_MA6]
MQENIVIHGARAHNLKNIDVTIPREKLVVVTGLSGSGKSSLAFDTLYAEGQRRYVESLSAYARQFLGNMDKPDVDSIEGL
SPAISIDQKTTSRNPRSTVGTATEINDYLRLLYARVGVPYCINGHGAISASSVEQIVDEVLELPERQRLQILAPIVRKKK
GQHKTIFEKVQKDGYVRVRVNGDVYDVSEVPELSKSKAHNIEVVVDRIVIKEGIRSRLFDSIEAALRIADGYVIIDTMDE
KELLFSEYYACPVCGFTVPELEPRLFSFNAPFGSCSDCDGLGMKLEVDTDLIVPDASKTLRDGALAPWNPISSNYYPQML
EQAMNHFGIDMDMPFEQLTEVEKNLIFNGSDGKEFHFHYENEFGGVRDIDIPFEGLITNINRRYRETNSDYTRTVMKTYM
NELTCGTCHGYRLNDQALSVKVGGEKGLHIGQLSDLSVADHLQVIENLTLSENEATIATPIVKEIKDRLSFLNNVGLNYL
TLSRAAGTLSGGESQRIRLATQIGSNLSGVLYILDEPSIGLHQRDNDRLIASLKKMRDLGNTLIVVEHDEDTMREADWLI
DIGPGAGVFGGEIVASGTPAQVAKNKKSITGQYLSGKREIPVPLERRVGNGRFLEVTGAKENNLQDVTVRFPLGKFVAVT
GVSGSGKSTLVNSILKKAIAQKLNRNSDKPGKFKSISGIEHLDRLIDIDQSPIGRTPRSNPATYTGVFDDIRDLFAQTNE
AKIRGYKKGRFSFNVKGGRCEACSGDGIIKIEMHFLPDVFVPCEVCRGHRYNSETLEVHYKEKNIAQVLDMTVNDAVEFF
KHIPKIERKLRTIQDVGLGYVTLGQPATTLSGGEAQRMKLASELHKRSTGKSLYILDEPTTGLHTEDIAQLLKVLARFVD
DGNTVLVIEHNLDVIKTADHIIDMGPEGGVGGGTVVATGTPEEVAANPASFTGQYLKMKLK

Nucleotide

• Length: 2826 bp

>NTDB_id=537241 LIO31_RS08520 WP_023371429.1 1690219..1693044(-) (uvrA) [Streptococcus suis strain Ssuis_MA6]
ATGCAAGAAAATATTGTGATTCATGGGGCGCGTGCCCATAATTTGAAAAATATTGATGTGACCATTCCGCGTGAGAAGTT
GGTGGTGGTGACTGGTTTGTCGGGGTCTGGTAAGTCGAGTTTGGCTTTTGATACTCTGTATGCCGAAGGCCAACGTCGCT
ATGTGGAATCGTTGTCTGCCTATGCACGTCAGTTTTTGGGCAATATGGACAAGCCTGATGTGGATTCCATAGAGGGACTT
AGCCCTGCTATTTCCATTGACCAAAAAACCACGTCGAGGAACCCGCGTTCGACGGTTGGAACGGCAACAGAAATCAATGA
CTATCTCCGTCTGCTTTATGCTCGGGTTGGGGTTCCTTACTGTATCAACGGCCACGGGGCGATTTCGGCTTCCTCGGTAG
AACAGATTGTCGATGAAGTTTTGGAATTGCCAGAGCGTCAGCGCTTGCAGATTCTAGCTCCGATTGTTCGTAAGAAAAAA
GGGCAACACAAGACCATTTTTGAGAAAGTGCAGAAGGACGGCTATGTTCGGGTCCGTGTCAATGGCGATGTCTATGATGT
GTCTGAAGTGCCTGAGTTGTCCAAGAGCAAGGCTCATAATATTGAAGTCGTTGTCGATCGAATTGTTATAAAAGAAGGTA
TTCGCTCTCGGCTCTTCGATTCCATAGAAGCGGCCCTGCGGATTGCGGACGGCTATGTCATCATCGACACCATGGATGAG
AAGGAACTGCTTTTCTCTGAGTACTATGCCTGCCCAGTTTGTGGTTTTACGGTGCCAGAGTTAGAACCACGTCTTTTCTC
CTTCAATGCGCCTTTTGGGTCTTGTAGTGATTGTGATGGACTTGGCATGAAGCTCGAAGTGGATACCGATTTGATAGTCC
CAGATGCCAGCAAGACCTTGCGTGACGGTGCCTTGGCTCCGTGGAATCCAATCTCATCCAACTACTATCCTCAGATGTTA
GAGCAGGCCATGAATCACTTTGGGATAGATATGGATATGCCATTCGAGCAGCTAACTGAGGTTGAAAAAAATCTGATTTT
CAACGGCTCTGATGGGAAGGAATTCCATTTCCACTATGAAAATGAATTTGGTGGGGTGCGGGATATTGATATTCCATTTG
AAGGCTTGATTACTAATATAAACCGCCGCTACCGTGAAACCAATAGTGATTATACACGGACAGTCATGAAGACTTACATG
AATGAATTGACCTGTGGAACCTGCCACGGCTATCGCCTCAATGACCAAGCCCTGTCTGTCAAAGTCGGAGGCGAAAAGGG
ACTGCATATCGGACAATTATCAGACTTGTCCGTGGCGGATCATTTGCAAGTCATTGAAAATCTGACCTTGTCTGAAAATG
AAGCCACCATTGCAACACCCATTGTCAAGGAAATCAAGGATCGCCTGTCCTTCCTTAATAACGTTGGTCTCAACTATCTG
ACTCTTTCACGAGCAGCAGGTACCCTTTCTGGAGGTGAGAGCCAACGGATTCGTCTGGCGACTCAGATTGGCTCTAACCT
GTCTGGGGTCCTCTATATTCTGGATGAGCCGTCGATTGGTCTGCACCAGCGGGACAATGATCGTCTCATTGCCAGCCTGA
AAAAGATGCGTGATTTGGGCAATACCCTGATTGTTGTTGAGCATGATGAGGACACCATGCGTGAGGCGGACTGGTTGATT
GACATCGGTCCAGGTGCGGGTGTCTTTGGCGGAGAAATCGTGGCTTCTGGAACGCCTGCCCAAGTAGCTAAAAACAAGAA
ATCCATTACAGGCCAGTACCTGTCTGGCAAACGTGAAATTCCAGTTCCTTTGGAACGTCGTGTTGGCAATGGTCGTTTCC
TGGAGGTAACAGGTGCCAAGGAAAATAACCTGCAAGATGTGACTGTTCGTTTCCCGCTCGGAAAATTTGTGGCGGTAACA
GGGGTGTCTGGCTCTGGTAAGTCAACTCTGGTCAACTCCATTTTGAAAAAAGCTATTGCACAGAAACTCAATCGCAATTC
GGACAAGCCAGGTAAGTTCAAGTCCATTTCAGGAATTGAACACTTGGACCGCCTGATTGATATTGACCAAAGCCCGATTG
GACGAACACCGCGTTCCAACCCAGCTACCTACACAGGTGTCTTTGACGATATTCGGGATTTGTTTGCCCAGACCAATGAA
GCCAAAATCCGTGGCTACAAGAAGGGACGTTTCTCCTTTAACGTCAAAGGTGGTCGTTGTGAGGCTTGTTCTGGTGATGG
TATCATCAAGATTGAAATGCACTTCCTGCCAGATGTCTTTGTACCTTGTGAAGTCTGTCGTGGACACCGCTACAATTCTG
AAACCTTGGAAGTACATTACAAGGAGAAAAATATCGCCCAGGTCCTTGATATGACGGTCAATGATGCGGTCGAGTTCTTC
AAACATATTCCGAAAATTGAGCGGAAACTTCGCACCATTCAAGATGTAGGCTTGGGCTATGTTACTCTAGGTCAGCCAGC
AACCACCCTATCAGGTGGGGAAGCCCAGCGGATGAAGTTGGCATCGGAACTTCACAAGCGGTCAACTGGTAAATCCTTGT
ATATCTTGGATGAGCCGACGACAGGTCTGCATACGGAGGACATTGCCCAGTTGCTCAAGGTCTTGGCCCGCTTTGTTGAT
GATGGCAATACCGTGCTGGTCATCGAGCATAATCTGGATGTGATCAAGACAGCAGACCATATTATCGACATGGGACCAGA
AGGCGGTGTCGGCGGTGGTACCGTTGTTGCGACAGGAACGCCAGAAGAAGTAGCAGCTAACCCAGCCAGCTTTACAGGCC
AGTATCTGAAAATGAAGTTGAAATAA

Domains

Predicted by InterProScan.

• UvrA interaction domain (UvrA_inter) (132-238)

• UvrA DNA-binding domain (UvrA_DNA-bind) (288-396)

• ABC transporter (ABC_tran) (624-860)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
uvrA	Streptococcus pneumoniae R6	88.936	99.894	0.888
uvrA	Streptococcus pneumoniae TIGR4	88.936	99.894	0.888
uvrA	Streptococcus pneumoniae D39	88.936	99.894	0.888