Detailed information NTG0537158

Bioinformatically predicted

Overview

• Name: rarA
• Type: Machinery gene
• Locus tag: LIO34_RS10290
• Genome accession: NZ_CP085085
• Coordinates: 2079648..2080934 (+)
• Length: 428 a.a.
• NCBI ID: WP_002939120.1
• Uniprot ID: -
• Organism: Streptococcus suis strain Ssuis_MA8
• Function: homologous recombination (predicted from homology) Homologous recombination

Genomic Context

Location: 2074648..2085934

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
LIO34_RS10265	-	2075176..2076438 (-)	1263	WP_002939093.1	hypothetical protein	-
LIO34_RS10270	-	2076452..2077198 (-)	747	WP_002939095.1	16S rRNA (uracil(1498)-N(3))-methyltransferase	-
LIO34_RS10275	prmA	2077200..2078153 (-)	954	WP_002939103.1	50S ribosomal protein L11 methyltransferase	-
LIO34_RS10280	-	2078749..2079102 (-)	354	WP_009910982.1	ASCH domain-containing protein	-
LIO34_RS10285	-	2079104..2079574 (-)	471	WP_002939116.1	DUF3013 family protein	-
LIO34_RS10290	rarA	2079648..2080934 (+)	1287	WP_002939120.1	replication-associated recombination protein A	Machinery gene
LIO34_RS10305	nrdG	2081415..2081972 (-)	558	WP_002939123.1	anaerobic ribonucleoside-triphosphate reductase activating protein	-
LIO34_RS10310	-	2082159..2082653 (-)	495	WP_002939125.1	GNAT family N-acetyltransferase	-
LIO34_RS10315	-	2082655..2084001 (-)	1347	WP_009910991.1	bifunctional UDP-sugar hydrolase/5'-nucleotidase	-
LIO34_RS10755	-	2084003..2084137 (-)	135	WP_002939130.1	hypothetical protein	-

Sequence

Protein

• Length: 428 a.a.
• Molecular weight: 47301.95 Da
• Isoelectric Point: 6.4389

>NTDB_id=537158 LIO34_RS10290 WP_002939120.1 2079648..2080934(+) (rarA) [Streptococcus suis strain Ssuis_MA8]
MPANLALRMRPKSIDEVIGQEHLVGPGKIIRRMIDANMLSSMILYGPPGIGKTSIASAIAGTTKYAFRTFNATTDNQKRL
QEIAEEAKFSGGLVLMLDEIHRLNKTKQDFLLPLLENGNIIMIGATTENPFFSILPAIRSRVQIFELQPLKTSHIRQALE
LALTDSERGFDFPVTIEPEALDFLANATNGDLRAAYNSLELAVLSTKESDDGSRHIDLDAVENSLQKSYISMDKNGDAHY
DILSALQKSIRGSDVNASLHYAARLIEAEDLPSLARRLTVIAYEDIGLANPEAQIHTVTALEAAQKIGFPEARILIANVV
IDLALSPKSNSAYLAMDAALADLRKNGHLPIPNHLRDGHYAGSKELGNAIGYQYPHAYPEKWVDQQYLPDKLLAADYFTA
NDTGKYERALGMTQEKIKNLKKNRRQNP

Nucleotide

• Length: 1287 bp

>NTDB_id=537158 LIO34_RS10290 WP_002939120.1 2079648..2080934(+) (rarA) [Streptococcus suis strain Ssuis_MA8]
ATGCCAGCCAATCTCGCCCTTCGTATGCGGCCCAAATCCATTGATGAAGTCATCGGTCAGGAACACCTGGTCGGTCCTGG
AAAGATTATCCGTCGCATGATTGATGCCAATATGCTGTCGTCCATGATTCTCTACGGTCCGCCAGGGATTGGTAAGACCT
CGATTGCGTCCGCCATTGCTGGTACGACCAAGTATGCCTTTCGAACCTTTAATGCCACGACAGACAACCAAAAACGCCTG
CAGGAAATCGCTGAAGAAGCTAAATTTTCTGGTGGCCTGGTCCTCATGCTCGATGAAATCCACCGCCTCAACAAGACTAA
ACAGGACTTCCTGCTTCCTCTTTTGGAAAACGGCAATATCATCATGATTGGAGCAACGACGGAAAATCCCTTCTTCTCAA
TTTTGCCTGCCATTCGCAGTCGGGTGCAGATTTTTGAATTACAACCTTTGAAAACCAGTCACATCCGACAGGCCTTGGAA
CTGGCTCTGACAGACAGCGAACGTGGTTTTGATTTTCCCGTCACCATTGAACCTGAGGCCCTGGATTTTCTGGCAAATGC
GACAAACGGTGACCTTCGTGCCGCTTACAATTCTCTAGAACTGGCTGTGCTTTCGACCAAGGAAAGTGACGACGGTAGCC
GCCACATTGATCTGGACGCCGTGGAAAATAGCCTGCAAAAGTCCTACATCAGCATGGACAAGAACGGCGATGCCCACTAC
GATATCCTCTCCGCCCTACAAAAATCCATTCGAGGTAGCGATGTCAATGCCAGCCTCCACTACGCCGCTCGTTTGATTGA
GGCCGAAGATCTGCCTAGTCTGGCCCGTCGCTTGACGGTCATTGCCTACGAAGACATCGGCTTGGCCAATCCAGAGGCTC
AGATTCATACGGTGACGGCCCTTGAAGCCGCCCAGAAAATTGGCTTTCCAGAGGCACGCATTTTGATTGCCAATGTGGTG
ATTGATTTGGCTCTTTCTCCCAAGTCCAATTCTGCCTATCTGGCTATGGATGCAGCTCTGGCTGATTTGCGGAAAAACGG
CCATCTGCCCATTCCAAATCATCTTCGGGATGGCCACTATGCTGGCAGCAAGGAGCTGGGAAATGCTATTGGCTACCAGT
ATCCGCATGCCTATCCTGAAAAATGGGTGGACCAGCAATACCTGCCCGATAAGTTACTAGCTGCGGACTACTTCACCGCC
AACGACACTGGAAAATACGAGCGTGCCTTGGGCATGACACAAGAAAAGATAAAAAATTTGAAAAAAAATAGACGCCAAAA
TCCTTGA

Domains

Predicted by InterProScan.

• MgsA AAA+ ATPase C terminal (MgsA_C) (252-416)

• AAA C-terminal domain (AAA_assoc_2) (173-251)

• ATPase family associated with various cellular activities (AAA) (AAA) (42-144)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
rarA	Bacillus subtilis subsp. subtilis str. 168	59.809	97.664	0.584