Detailed information NTG0536458

Bioinformatically predicted

Overview

• Name: rarA
• Type: Machinery gene
• Locus tag: LH646_RS18365
• Genome accession: NZ_CP085039
• Coordinates: 4266227..4267591 (-)
• Length: 454 a.a.
• NCBI ID: WP_003947047.1
• Uniprot ID: A0ABR4S6Y1
• Organism: Streptomyces sp. WA1-19
• Function: homologous recombination (predicted from homology) Homologous recombination

Genomic Context

Location: 4261227..4272591

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
LH646_RS18345 (LH646_18345)	alaS	4261504..4264176 (-)	2673	WP_151170054.1	alanine--tRNA ligase	-
LH646_RS18350 (LH646_18350)	-	4264176..4264538 (-)	363	WP_030695446.1	hypothetical protein	-
LH646_RS18355 (LH646_18355)	-	4264545..4264997 (-)	453	WP_078858185.1	DUF948 domain-containing protein	-
LH646_RS18360 (LH646_18360)	rpsD	4265245..4265859 (-)	615	WP_003947046.1	30S ribosomal protein S4	-
LH646_RS18365 (LH646_18365)	rarA	4266227..4267591 (-)	1365	WP_003947047.1	replication-associated recombination protein A	Machinery gene
LH646_RS18370 (LH646_18370)	-	4267659..4268303 (-)	645	WP_030695449.1	vitamin K epoxide reductase family protein	-
LH646_RS18375 (LH646_18375)	hisS	4268587..4269849 (-)	1263	WP_030695450.1	histidine--tRNA ligase	-
LH646_RS18380 (LH646_18380)	-	4269864..4270580 (-)	717	WP_047469657.1	MBL fold metallo-hydrolase	-
LH646_RS18385 (LH646_18385)	-	4270745..4271575 (+)	831	WP_226965032.1	peptidylprolyl isomerase	-

Sequence

Protein

• Length: 454 a.a.
• Molecular weight: 47947.26 Da
• Isoelectric Point: 6.2449

>NTDB_id=536458 LH646_RS18365 WP_003947047.1 4266227..4267591(-) (rarA) [Streptomyces sp. WA1-19]
MEPDLFTAAAEDRQEKDPSSSPLAVRMRPRTLDEVVGQQHLLKPGSPLRRLVGEGGGGPAGPSSVFLWGPPGIGKTTLAY
VVSKATNKRFVELSAITAGVKEVRAVIDGARRASGGFGKETVLFLDEIHRFSKAQQDSLLPAVENRWVTLIAATTENPYF
SVISPLLSRSLLLTLEPLTDEDLRGLVHRALTDERGLAGSVTLAEDAEAHLLRVAGGDARRALTALEAGAGAALDKGEAE
ITLTTLEESVDRAAVAYDRAGDQHYDVASALIKSIRGSDVDAALHYLARMIDAGEDPRFIARRLMISASEDIGLADPTAL
PTAVAAAQAVAMIGFPEAALTLSHATIALALAPKSNAATTAIGAALEDVRKGHAGPVPTHLRDGHYKGAAKLGHAQGYIY
PHDVPGAIAAQQYAPDALAGKRYYQPTRYGAEARYADVVEKVRERLAEGGRGEG

Nucleotide

• Length: 1365 bp

>NTDB_id=536458 LH646_RS18365 WP_003947047.1 4266227..4267591(-) (rarA) [Streptomyces sp. WA1-19]
GTGGAACCCGACCTCTTCACCGCAGCAGCCGAGGACCGCCAGGAGAAGGACCCGTCCAGCAGCCCCCTGGCCGTCCGGAT
GCGCCCCCGCACCCTGGACGAGGTGGTCGGCCAGCAGCACCTGCTCAAGCCCGGATCGCCGCTGCGCCGCCTCGTCGGCG
AGGGCGGCGGCGGCCCGGCCGGCCCCTCCTCGGTCTTCCTCTGGGGCCCGCCCGGCATCGGCAAGACGACCCTCGCGTAC
GTGGTCAGCAAGGCCACCAACAAGCGGTTCGTGGAGCTCTCCGCGATCACCGCCGGGGTCAAGGAGGTGCGCGCCGTCAT
CGACGGCGCCCGCCGCGCCTCCGGCGGCTTCGGCAAGGAGACCGTCCTCTTCCTCGACGAGATCCACCGCTTCTCCAAGG
CCCAGCAGGACTCCCTGCTGCCAGCGGTGGAGAACCGCTGGGTCACCCTCATCGCCGCCACCACCGAGAACCCGTACTTC
TCGGTGATCTCCCCGCTGCTCTCCCGCTCGCTGCTGCTCACCCTGGAGCCGCTGACCGACGAGGACCTGCGGGGCCTGGT
CCACCGCGCCCTCACCGACGAGCGGGGCCTGGCCGGCTCCGTCACCCTCGCCGAGGACGCCGAGGCCCACCTGCTGCGGG
TCGCCGGGGGCGACGCCCGCCGGGCCCTGACCGCCCTGGAGGCGGGCGCCGGGGCCGCGCTCGACAAGGGCGAGGCGGAG
ATCACCCTCACCACCCTGGAAGAGTCGGTGGACCGGGCCGCCGTCGCCTACGACCGCGCGGGCGACCAGCACTACGACGT
GGCGAGCGCCCTCATCAAGTCCATCCGCGGCTCGGACGTGGACGCCGCCCTGCACTACCTGGCCCGGATGATCGACGCGG
GCGAGGACCCCCGCTTCATCGCCCGCCGCCTGATGATCTCGGCCAGCGAGGACATCGGCCTCGCCGACCCCACCGCCCTG
CCCACCGCGGTCGCCGCCGCCCAGGCCGTCGCCATGATCGGCTTCCCCGAGGCCGCGCTGACCCTCAGCCACGCCACCAT
CGCCCTCGCCCTGGCCCCCAAGTCCAACGCCGCCACCACCGCCATCGGCGCCGCCCTGGAGGACGTCCGCAAGGGCCACG
CCGGACCGGTCCCCACCCACCTGCGGGACGGCCACTACAAGGGCGCGGCCAAGCTCGGCCACGCCCAGGGGTACATCTAC
CCGCACGACGTCCCCGGCGCCATCGCCGCCCAGCAGTACGCCCCGGACGCCCTCGCCGGGAAGCGGTACTACCAGCCCAC
CCGGTACGGCGCCGAGGCCCGCTACGCCGACGTGGTCGAGAAGGTCCGCGAGCGCCTCGCCGAGGGCGGCCGAGGCGAGG
GCTGA

Domains

Predicted by InterProScan.

• AAA C-terminal domain (AAA_assoc_2) (199-276)

• MgsA AAA+ ATPase C terminal (MgsA_C) (277-442)

• ATPase family associated with various cellular activities (AAA) (AAA) (65-169)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
rarA	Bacillus subtilis subsp. subtilis str. 168	44.419	94.714	0.421