Detailed information NTG0535444

Bioinformatically predicted

Overview

• Name: xcpW
• Type: Machinery gene
• Locus tag: I6J44_RS11345
• Genome accession: NZ_CP069537
• Coordinates: 2378423..2379238 (+)
• Length: 271 a.a.
• NCBI ID: WP_002121460.1
• Uniprot ID: A0A009NS11
• Organism: Acinetobacter pittii strain FDAARGOS_1214
• Function: pseudopilus assembly (predicted from homology) DNA binding and uptake

Genomic Context

Location: 2373423..2384238

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
I6J44_RS11310 (I6J44_11310)	kdsB	2373949..2374710 (+)	762	WP_002121419.1	3-deoxy-manno-octulosonate cytidylyltransferase	-
I6J44_RS11315 (I6J44_11315)	holB	2374724..2375704 (+)	981	WP_002121362.1	DNA polymerase III subunit delta'	-
I6J44_RS11320 (I6J44_11320)	pilZ	2375715..2376056 (+)	342	WP_016802779.1	PilZ domain-containing protein	-
I6J44_RS11325 (I6J44_11325)	ycfH	2376074..2376847 (+)	774	WP_002121462.1	TatD family hydrolase	-
I6J44_RS11330 (I6J44_11330)	-	2376884..2377492 (+)	609	WP_002121414.1	TetR/AcrR family transcriptional regulator	-
I6J44_RS11335 (I6J44_11335)	-	2377499..2378053 (+)	555	WP_002121405.1	type II secretion system protein	-
I6J44_RS11340 (I6J44_11340)	xcpV	2378043..2378423 (+)	381	WP_002121425.1	type II secretion system minor pseudopilin GspI	Machinery gene
I6J44_RS11345 (I6J44_11345)	xcpW	2378423..2379238 (+)	816	WP_002121460.1	type II secretion system minor pseudopilin GspJ	Machinery gene
I6J44_RS11350 (I6J44_11350)	gspK	2379239..2380198 (+)	960	WP_002121457.1	type II secretion system minor pseudopilin GspK	-
I6J44_RS11355 (I6J44_11355)	-	2380426..2381022 (+)	597	WP_002121363.1	6-pyruvoyl trahydropterin synthase family protein	-
I6J44_RS11360 (I6J44_11360)	ung	2381076..2381789 (+)	714	WP_002121342.1	uracil-DNA glycosylase	-
I6J44_RS11365 (I6J44_11365)	hibch	2381786..2382910 (+)	1125	WP_016803061.1	enoyl-CoA hydratase/isomerase family protein	-
I6J44_RS11370 (I6J44_11370)	tadA	2382916..2383419 (+)	504	WP_002121378.1	tRNA adenosine(34) deaminase TadA	-
I6J44_RS11375 (I6J44_11375)	-	2383490..2383930 (+)	441	WP_002121449.1	SRPBCC family protein	-

Sequence

Protein

• Length: 271 a.a.
• Molecular weight: 30932.32 Da
• Isoelectric Point: 9.9694

>NTDB_id=535444 I6J44_RS11345 WP_002121460.1 2378423..2379238(+) (xcpW) [Acinetobacter pittii strain FDAARGOS_1214]
MIKNKSFRSPSSASRLAVRSEQMMRGYSEQSSSSCTQTKHCFKDSHTRNIVSHLATRSSSARLTRASGFTLVELLVSIAI
FAILSLLGWKVFDYLLKVRDRNTQHEVQLFELQDAYQQVLRDTLQIIPLSANQGGQLRPALEIDNQVLRFSKAGVTDPLK
QGLSPFERIEYRYDPDQKKLYRLKYSNLNTSNREQPLSSTLLSQVEQFQIMVLTPQEVTKWPEVNIDPTKPDEFRKLPKG
IKMQLTVAGVNYEWIYSLNQGDLSLSKQGGQ

Nucleotide

• Length: 816 bp

>NTDB_id=535444 I6J44_RS11345 WP_002121460.1 2378423..2379238(+) (xcpW) [Acinetobacter pittii strain FDAARGOS_1214]
ATGATAAAGAATAAAAGTTTTCGCTCTCCAAGCTCAGCTTCACGTCTTGCGGTACGATCGGAGCAGATGATGAGGGGTTA
CTCCGAGCAAAGCTCTTCGTCTTGCACTCAGACAAAGCATTGCTTTAAAGACTCTCACACTCGAAACATAGTTTCTCATC
TTGCGACACGATCGAGCAGTGCTCGATTAACTCGTGCCTCAGGATTTACTTTAGTTGAGCTTTTAGTTTCAATTGCAATT
TTTGCTATTTTATCTTTGTTGGGTTGGAAGGTTTTTGACTATTTATTAAAAGTTCGCGATCGTAATACTCAACATGAAGT
GCAGCTATTTGAATTACAAGATGCTTATCAACAAGTTTTGCGTGATACATTGCAAATTATACCTTTATCAGCCAATCAAG
GCGGGCAATTACGTCCAGCTTTAGAGATTGATAATCAAGTTCTCCGCTTTAGTAAGGCGGGTGTTACTGATCCATTAAAG
CAAGGATTATCACCTTTTGAGCGTATCGAATATCGATATGATCCTGATCAAAAAAAGCTTTATCGCCTTAAATATAGTAA
CTTAAATACTTCAAATAGAGAGCAACCCTTATCAAGTACGCTGTTGAGCCAAGTTGAACAATTTCAAATTATGGTTTTGA
CACCTCAAGAAGTAACAAAGTGGCCTGAAGTTAATATTGACCCTACAAAACCTGATGAATTTAGGAAGTTGCCAAAAGGA
ATAAAAATGCAACTCACGGTTGCAGGTGTAAATTATGAGTGGATTTATAGCTTAAACCAAGGTGACTTATCGCTCTCCAA
ACAGGGAGGTCAATAA

Domains

Predicted by InterproScan.

• Type II secretion system (T2SS), protein J (T2SSJ) (121-250)

• Prokaryotic N-terminal methylation motif (N_methyl) (65-87)

3D structure

• AlphaFold DB: A0A009NS11

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
xcpW	Acinetobacter baumannii D1279779	88.889	83.026	0.738