Detailed information NTG0535181

Bioinformatically predicted

Overview

• Name: xcpW
• Type: Machinery gene
• Locus tag: I6J45_RS09035
• Genome accession: NZ_CP069504
• Coordinates: 1922327..1923142 (-)
• Length: 271 a.a.
• NCBI ID: WP_002121460.1
• Uniprot ID: A0A009NS11
• Organism: Acinetobacter pittii strain FDAARGOS_1215
• Function: pseudopilus assembly (predicted from homology) DNA binding and uptake

Genomic Context

Location: 1917327..1928142

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
I6J45_RS09005 (I6J45_09005)	-	1917635..1918075 (-)	441	WP_002121449.1	SRPBCC family protein	-
I6J45_RS09010 (I6J45_09010)	tadA	1918146..1918649 (-)	504	WP_002121378.1	tRNA adenosine(34) deaminase TadA	-
I6J45_RS09015 (I6J45_09015)	hibch	1918655..1919779 (-)	1125	WP_016803061.1	enoyl-CoA hydratase/isomerase family protein	-
I6J45_RS09020 (I6J45_09020)	ung	1919776..1920489 (-)	714	WP_002121342.1	uracil-DNA glycosylase	-
I6J45_RS09025 (I6J45_09025)	-	1920543..1921139 (-)	597	WP_002121363.1	6-pyruvoyl trahydropterin synthase family protein	-
I6J45_RS09030 (I6J45_09030)	gspK	1921367..1922326 (-)	960	WP_002121457.1	type II secretion system minor pseudopilin GspK	-
I6J45_RS09035 (I6J45_09035)	xcpW	1922327..1923142 (-)	816	WP_002121460.1	type II secretion system minor pseudopilin GspJ	Machinery gene
I6J45_RS09040 (I6J45_09040)	xcpV	1923142..1923522 (-)	381	WP_002121425.1	type II secretion system minor pseudopilin GspI	Machinery gene
I6J45_RS09045 (I6J45_09045)	-	1923512..1924066 (-)	555	WP_002121405.1	type II secretion system protein	-
I6J45_RS09050 (I6J45_09050)	-	1924073..1924681 (-)	609	WP_002121414.1	TetR/AcrR family transcriptional regulator	-
I6J45_RS09055 (I6J45_09055)	ycfH	1924718..1925491 (-)	774	WP_002121462.1	TatD family hydrolase	-
I6J45_RS09060 (I6J45_09060)	pilZ	1925509..1925850 (-)	342	WP_002121335.1	PilZ domain-containing protein	-
I6J45_RS09065 (I6J45_09065)	holB	1925861..1926841 (-)	981	WP_002121362.1	DNA polymerase III subunit delta'	-
I6J45_RS09070 (I6J45_09070)	kdsB	1926855..1927616 (-)	762	WP_002121419.1	3-deoxy-manno-octulosonate cytidylyltransferase	-

Sequence

Protein

• Length: 271 a.a.
• Molecular weight: 30932.32 Da
• Isoelectric Point: 9.9694

>NTDB_id=535181 I6J45_RS09035 WP_002121460.1 1922327..1923142(-) (xcpW) [Acinetobacter pittii strain FDAARGOS_1215]
MIKNKSFRSPSSASRLAVRSEQMMRGYSEQSSSSCTQTKHCFKDSHTRNIVSHLATRSSSARLTRASGFTLVELLVSIAI
FAILSLLGWKVFDYLLKVRDRNTQHEVQLFELQDAYQQVLRDTLQIIPLSANQGGQLRPALEIDNQVLRFSKAGVTDPLK
QGLSPFERIEYRYDPDQKKLYRLKYSNLNTSNREQPLSSTLLSQVEQFQIMVLTPQEVTKWPEVNIDPTKPDEFRKLPKG
IKMQLTVAGVNYEWIYSLNQGDLSLSKQGGQ

Nucleotide

• Length: 816 bp

>NTDB_id=535181 I6J45_RS09035 WP_002121460.1 1922327..1923142(-) (xcpW) [Acinetobacter pittii strain FDAARGOS_1215]
ATGATAAAGAATAAAAGTTTTCGCTCTCCAAGCTCAGCTTCACGTCTTGCGGTACGATCGGAGCAGATGATGAGGGGTTA
CTCCGAGCAAAGCTCTTCGTCTTGCACTCAGACAAAGCATTGCTTTAAAGACTCTCACACTCGAAACATAGTTTCTCATC
TTGCGACACGATCGAGCAGTGCTCGATTAACTCGTGCCTCAGGATTTACTTTAGTTGAGCTTTTAGTTTCAATTGCAATT
TTTGCTATTTTATCTTTGTTGGGTTGGAAGGTTTTTGACTATTTATTAAAAGTTCGCGATCGTAATACTCAACATGAAGT
GCAGCTATTTGAATTACAAGATGCTTATCAACAAGTTTTGCGTGATACATTGCAAATTATACCTTTATCAGCCAATCAAG
GCGGGCAATTACGTCCAGCTTTAGAGATTGATAATCAAGTTCTCCGCTTTAGTAAGGCGGGTGTTACTGATCCATTAAAG
CAAGGATTATCACCTTTTGAGCGTATCGAATATCGATATGATCCTGATCAAAAAAAGCTTTATCGCCTTAAATATAGTAA
CTTAAATACTTCAAATAGAGAGCAACCCTTATCAAGTACGCTGTTGAGCCAAGTTGAACAATTTCAAATTATGGTTTTGA
CACCTCAAGAAGTAACAAAGTGGCCTGAAGTTAATATTGACCCTACAAAACCTGATGAATTTAGGAAGTTGCCAAAAGGA
ATAAAAATGCAACTCACGGTTGCAGGTGTAAATTATGAGTGGATTTATAGCTTAAACCAAGGTGACTTATCGCTCTCCAA
ACAGGGAGGTCAATAA

Domains

Predicted by InterproScan.

• Type II secretion system (T2SS), protein J (T2SSJ) (121-250)

• Prokaryotic N-terminal methylation motif (N_methyl) (65-87)

3D structure

• AlphaFold DB: A0A009NS11

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
xcpW	Acinetobacter baumannii D1279779	88.889	83.026	0.738