Detailed information NTG0534479

Bioinformatically predicted

Overview

• Name: rarA
• Type: Machinery gene
• Locus tag: KBP30_RS32780
• Genome accession: NZ_CP084203
• Coordinates: 7595785..7597140 (+)
• Length: 451 a.a.
• NCBI ID: WP_189300503.1
• Uniprot ID: -
• Organism: Streptomyces sp. Go40/10 strain Go 40/10
• Function: homologous recombination (predicted from homology) Homologous recombination

Genomic Context

Location: 7590785..7602140

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
KBP30_RS32760 (KBP30_32785)	-	7591874..7592698 (-)	825	WP_230921409.1	peptidylprolyl isomerase	-
KBP30_RS32765 (KBP30_32790)	-	7592867..7593574 (+)	708	WP_189300497.1	MBL fold metallo-hydrolase	-
KBP30_RS32770 (KBP30_32795)	hisS	7593588..7594850 (+)	1263	WP_230921410.1	histidine--tRNA ligase	-
KBP30_RS32775 (KBP30_32800)	-	7595085..7595741 (+)	657	WP_230921411.1	vitamin K epoxide reductase family protein	-
KBP30_RS32780 (KBP30_32805)	rarA	7595785..7597140 (+)	1356	WP_189300503.1	replication-associated recombination protein A	Machinery gene
KBP30_RS32785 (KBP30_32810)	rpsD	7597434..7598048 (+)	615	WP_189300505.1	30S ribosomal protein S4	-
KBP30_RS32790 (KBP30_32815)	-	7598070..7600241 (-)	2172	WP_230921412.1	regulator	-
KBP30_RS32795 (KBP30_32820)	-	7600395..7600829 (+)	435	WP_189300509.1	DUF948 domain-containing protein	-
KBP30_RS32800 (KBP30_32825)	-	7600846..7601193 (+)	348	WP_189300511.1	hypothetical protein	-

Sequence

Protein

• Length: 451 a.a.
• Molecular weight: 48234.56 Da
• Isoelectric Point: 6.1046

>NTDB_id=534479 KBP30_RS32780 WP_189300503.1 7595785..7597140(+) (rarA) [Streptomyces sp. Go40/10 strain Go 40/10]
MEPDLFTAAAEERQEKDPSASPLAVRMRPRTLDEVVGQQHLLGPGSPLRRLVGEGNGGPAGPSSVILWGPPGTGKTTLAY
VVSKATNKRFVELSAITAGVKEVRAVIDGARRATGGFGKETVLFLDEIHRFSKAQQDSLLPAVENRWVTLIAATTENPYF
SVISPLLSRSLLLTLEPLTDDDIRGLLRRALGDERGLKDAVALPEDTEEHLLRIAGGDARRALTALEAAAGAALDQGESE
ISLQTLEQTVDRAAVKYDRDGDQHYDVASALIKSIRGSDVDAALHYLARMIEAGEDPRFIARRLMISASEDIGLADPGAL
PIAVAAAQAVAMIGFPEAALTLSHATIALALAPKSNSATTAIGAAMEDVRKGLAGPVPPHLRDGHYKGAAKLGHAQGYVY
PHDLPEGIAQQQYAPDALKDREYYTPSRHGAEARYADAVEWTRAHLGRRRS

Nucleotide

• Length: 1356 bp

>NTDB_id=534479 KBP30_RS32780 WP_189300503.1 7595785..7597140(+) (rarA) [Streptomyces sp. Go40/10 strain Go 40/10]
GTGGAACCCGACCTCTTCACCGCAGCAGCAGAAGAACGCCAGGAGAAGGACCCGTCGGCCAGCCCCCTGGCGGTGCGCAT
GCGCCCGCGCACGCTCGACGAGGTCGTGGGACAGCAGCACCTGCTGGGACCCGGCTCCCCCCTGCGCCGGCTGGTCGGCG
AGGGCAACGGCGGCCCCGCCGGACCCTCCTCGGTGATCCTGTGGGGCCCGCCCGGCACCGGCAAGACCACCCTGGCGTAC
GTGGTCTCCAAGGCCACCAACAAGCGGTTCGTGGAGCTGTCCGCGATCACCGCGGGCGTCAAGGAGGTCCGCGCGGTCAT
CGACGGCGCCCGCCGCGCCACCGGCGGCTTCGGCAAGGAGACCGTCCTCTTCCTGGACGAGATCCACCGCTTCAGCAAGG
CCCAGCAGGACTCCCTGCTCCCGGCCGTGGAGAACCGCTGGGTGACCCTGATCGCGGCCACCACGGAGAACCCGTACTTC
TCGGTGATCTCCCCGCTGCTCTCCCGCTCCCTCCTGCTCACCCTCGAACCGCTCACCGACGACGACATCCGCGGCCTGCT
CCGGCGCGCCCTCGGCGACGAACGCGGCCTGAAGGACGCCGTCGCCCTCCCCGAGGACACCGAGGAGCACCTGCTCCGGA
TCGCCGGCGGCGACGCCCGCCGCGCCCTGACCGCTCTGGAGGCCGCCGCCGGGGCCGCCCTCGACCAGGGCGAGAGCGAG
ATCAGCCTCCAGACGCTGGAGCAGACCGTCGACCGCGCCGCCGTGAAGTACGACCGCGACGGCGACCAGCACTACGACGT
CGCCAGCGCCCTCATCAAGTCCATCCGCGGCTCCGACGTCGACGCGGCCCTGCACTACCTGGCCCGCATGATCGAGGCCG
GCGAGGACCCCCGGTTCATCGCCCGCCGCCTGATGATCTCCGCCAGCGAGGACATCGGCCTGGCCGACCCGGGCGCCCTG
CCGATCGCGGTCGCCGCCGCCCAGGCCGTCGCCATGATCGGCTTCCCGGAGGCCGCCCTCACCCTCAGCCACGCCACCAT
CGCCCTGGCCCTCGCCCCCAAGTCCAACTCGGCGACCACCGCGATCGGCGCCGCCATGGAGGACGTACGCAAGGGCCTGG
CCGGCCCGGTCCCGCCGCACCTGCGCGACGGGCACTACAAGGGCGCCGCCAAGCTCGGCCACGCCCAGGGGTACGTGTAC
CCGCACGACCTGCCCGAGGGCATCGCCCAGCAGCAGTACGCCCCGGACGCCCTGAAGGACCGCGAGTACTACACGCCGAG
CCGGCACGGAGCCGAGGCCAGATACGCGGACGCCGTCGAGTGGACCCGCGCCCACCTCGGTCGCAGACGGTCCTGA

Domains

Predicted by InterProScan.

• ATPase family associated with various cellular activities (AAA) (AAA) (65-169)

• AAA C-terminal domain (AAA_assoc_2) (200-276)

• MgsA AAA+ ATPase C terminal (MgsA_C) (277-441)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
rarA	Bacillus subtilis subsp. subtilis str. 168	44.342	96.009	0.426