Detailed information NTG0534334

Bioinformatically predicted

Overview

• Name: recD/recD2/recDB
• Type: Machinery gene
• Locus tag: I6G24_RS01370
• Genome accession: NZ_CP084189
• Coordinates: 179124..181628 (+)
• Length: 834 a.a.
• NCBI ID: WP_047685994.1
• Uniprot ID: -
• Organism: Lactococcus lactis strain FDAARGOS_867
• Function: homologous recombination (predicted from homology) Homologous recombination

Genomic Context

Location: 174124..186628

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
I6G24_RS01345 (I6G24_01340)	-	174701..175765 (+)	1065	WP_047685998.1	prephenate dehydrogenase	-
I6G24_RS01350 (I6G24_01345)	aroA	175886..177178 (+)	1293	WP_003132786.1	3-phosphoshikimate 1-carboxyvinyltransferase	-
I6G24_RS01355 (I6G24_01350)	-	177202..177690 (+)	489	WP_003132788.1	shikimate kinase	-
I6G24_RS01360 (I6G24_01355)	pheA	177692..178531 (+)	840	WP_014570689.1	prephenate dehydratase	-
I6G24_RS01365 (I6G24_01360)	-	178534..179127 (+)	594	WP_010906114.1	histidine phosphatase family protein	-
I6G24_RS01370 (I6G24_01365)	recD/recD2/recDB	179124..181628 (+)	2505	WP_047685994.1	ATP-dependent RecD-like DNA helicase	Machinery gene
I6G24_RS01375 (I6G24_01370)	rpsT	181722..181955 (-)	234	WP_010906113.1	30S ribosomal protein S20	-
I6G24_RS01380 (I6G24_01375)	-	182288..182800 (+)	513	WP_003132795.1	HD domain-containing protein	-
I6G24_RS01385 (I6G24_01380)	-	182957..183871 (+)	915	WP_023164460.1	diacylglycerol kinase family protein	-
I6G24_RS01390 (I6G24_01385)	-	183984..184697 (+)	714	WP_023164443.1	Bax inhibitor-1/YccA family protein	-
I6G24_RS01395 (I6G24_01390)	-	184772..185455 (-)	684	WP_003130398.1	lactate utilization protein C	-

Sequence

Protein

• Length: 834 a.a.
• Molecular weight: 93014.58 Da
• Isoelectric Point: 4.5558

>NTDB_id=534334 I6G24_RS01370 WP_047685994.1 179124..181628(+) (recD/recD2/recDB) [Lactococcus lactis strain FDAARGOS_867]
MIEKTYFTGSIEAIFFSNPSNFYKVLLIEIDETNAEYDNFEIVVNGTIGDVVEGDSYTFYGQLTQHPKYGEQLQVSQYEK
AVPTSGAGLVKYFSSDKFPGIGKKTAEKIVETFPENTVDSILEAPEKLDGLLTLARKNSFIKRLRENHGMEKVLTKLAEY
GLPSKITFQIYELYKEETIEKIEENPYQLVEDVKGVGFKTADKIASSLGIEADSPNRFRAALMHEVNTHSQSTGDTYIEA
KNLLEMTIDLLEEARNVEVNPSAVAEEINGLIVDGKVQQEGTKIFENSLYFAEDGIRKSLTALTNRSGKDFADEKLLTVL
AEVERDLEITYDDLQKQAIIGAMNQQFFILTGGPGTGKTTIINGFIETYARLHQLDLDPDHYNDDVFPILLAAPTGRASR
RMNELTGLPAATIHRHLGLGQDEAEDSLGNELSGALLIVDEFSMVDTWLANKLFQAIPGSMKVLLVGDADQLPSVGPGQI
FADLLKIPEIPLVKLDKIFRQGDDSTITDLAHHIKDGQLPSDFTAKKPDRSYFEVSANFVPQMVEQIASAWQKRGNNPFE
LQILAPMYKGMAGINAMNVLLQNLFNPLNDRLEFALGDMKFREGDKVLHLVNDAEANVFNGDLGQIVELIAAKYTDSKQD
ELVMDFDGQELTYPRAEWYKITLAYAMSIHKSQGSEFSTVIVPMVSSYSRMLERNLLYTAITRAKQSLILLGEERAFAQA
VAREGANRKTYLIERFMGENPAAKNLSVEIVSEKVTDKKERSDKEKKPAAPVELQGQIRSVSKKMPAQVEEISLFEDKEI
ETLDKGSLTEALILSGNFDPLIGLTQQDFAIFNK

Nucleotide

• Length: 2505 bp

>NTDB_id=534334 I6G24_RS01370 WP_047685994.1 179124..181628(+) (recD/recD2/recDB) [Lactococcus lactis strain FDAARGOS_867]
ATGATTGAAAAAACTTATTTTACTGGTTCGATTGAGGCAATATTTTTCTCCAATCCCAGTAATTTTTATAAAGTTCTACT
CATTGAAATTGATGAAACTAATGCTGAATATGATAATTTTGAAATTGTGGTTAACGGGACAATTGGGGATGTGGTTGAAG
GAGATTCTTATACATTTTATGGTCAATTGACGCAGCATCCTAAATATGGGGAACAATTACAGGTCAGTCAATATGAAAAA
GCAGTGCCGACTTCTGGTGCTGGTTTAGTTAAATATTTTTCTTCAGATAAATTTCCTGGAATTGGTAAGAAAACGGCAGA
AAAAATTGTTGAAACTTTTCCTGAAAATACGGTAGATTCAATTTTAGAAGCGCCGGAGAAATTGGATGGTCTATTGACCC
TAGCCAGAAAAAATTCATTTATCAAACGATTACGTGAGAATCATGGAATGGAAAAAGTGCTGACCAAGCTTGCAGAATAT
GGCTTACCAAGCAAAATCACTTTTCAAATTTATGAACTTTATAAAGAAGAAACGATTGAAAAAATTGAGGAAAATCCTTA
TCAGCTTGTGGAAGATGTTAAGGGAGTTGGTTTTAAAACAGCTGATAAGATTGCAAGTAGTTTAGGAATTGAAGCGGATA
GCCCTAATCGATTTCGAGCGGCATTGATGCATGAGGTCAATACACATTCGCAATCAACAGGCGATACTTACATTGAAGCC
AAAAATTTACTTGAGATGACGATAGACTTACTTGAAGAAGCTCGTAATGTCGAGGTCAACCCGTCTGCTGTTGCGGAGGA
AATTAATGGTTTAATAGTTGATGGAAAAGTGCAACAAGAAGGAACAAAAATATTTGAGAATTCCTTGTACTTCGCTGAGG
ACGGGATTCGGAAATCACTGACAGCATTAACTAATCGTTCGGGTAAAGATTTTGCTGATGAAAAGTTACTGACAGTATTG
GCTGAAGTTGAAAGAGATTTAGAAATTACTTATGATGATTTGCAAAAGCAAGCCATTATTGGTGCAATGAATCAGCAATT
TTTCATTTTGACTGGTGGACCAGGAACTGGTAAAACAACAATTATTAATGGTTTTATTGAAACTTATGCCCGTCTTCATC
AGCTAGATTTGGACCCAGACCATTATAATGATGACGTCTTTCCTATATTACTGGCAGCACCGACTGGTCGAGCTTCAAGA
CGGATGAATGAGTTGACTGGTCTTCCAGCAGCGACGATTCACCGCCATTTGGGTTTGGGACAAGATGAAGCAGAAGATTC
TCTTGGAAATGAATTGTCTGGTGCTCTTTTGATTGTTGACGAATTTTCTATGGTTGATACTTGGTTAGCTAATAAACTTT
TTCAAGCGATTCCTGGTTCAATGAAAGTTCTCCTTGTTGGAGATGCTGACCAGCTTCCTTCTGTGGGGCCAGGACAAATT
TTTGCGGATTTACTAAAAATTCCAGAAATTCCGTTAGTAAAATTGGATAAGATTTTTCGTCAAGGGGATGATTCTACCAT
TACTGATTTAGCTCACCACATCAAAGATGGGCAATTGCCAAGTGATTTCACGGCGAAAAAACCTGACCGTTCTTATTTTG
AGGTCAGTGCAAATTTTGTTCCTCAGATGGTTGAACAAATCGCAAGTGCATGGCAAAAAAGAGGGAATAATCCTTTTGAA
TTACAAATCTTAGCGCCTATGTATAAAGGAATGGCCGGAATTAATGCAATGAATGTTCTTTTGCAAAATCTCTTTAATCC
GCTTAATGACCGACTTGAATTTGCTTTGGGTGATATGAAATTTCGTGAAGGAGATAAAGTTCTTCATTTAGTAAATGATG
CTGAGGCCAATGTATTTAACGGAGATTTGGGACAAATCGTAGAATTGATTGCAGCAAAATATACTGATAGTAAACAAGAT
GAGTTGGTGATGGATTTTGATGGTCAAGAATTGACTTATCCAAGAGCGGAGTGGTATAAAATTACTCTGGCTTATGCGAT
GTCCATTCATAAATCTCAAGGTTCGGAGTTTTCCACAGTTATTGTGCCGATGGTTTCTTCGTATTCACGCATGTTAGAGC
GAAATTTGCTTTATACGGCAATTACAAGGGCTAAACAAAGTCTGATTTTACTTGGTGAAGAACGAGCTTTTGCACAAGCG
GTGGCGCGTGAAGGAGCGAATCGAAAGACCTATCTGATTGAGCGATTTATGGGAGAAAATCCAGCGGCTAAAAATCTGTC
AGTAGAAATTGTGAGTGAAAAAGTTACTGACAAAAAAGAAAGATCTGACAAAGAGAAGAAGCCTGCAGCGCCAGTAGAAT
TACAAGGGCAAATTCGTTCTGTCAGTAAAAAAATGCCAGCACAAGTAGAAGAAATTTCTTTATTTGAAGATAAAGAAATT
GAAACACTGGATAAGGGAAGCTTGACAGAAGCACTTATTTTGTCAGGAAATTTTGACCCTTTAATTGGTTTAACTCAACA
AGACTTTGCAATCTTTAATAAATAA

Domains

Predicted by InterProScan.

• ATP-dependent RecD-like DNA helicase SH3 domain (SH3_13) (577-646)

• UvrD-like helicase C-terminal domain (UvrD_C_2) (664-710)

• AAA domain (AAA_30) (331-522)

• Helix-hairpin-helix containing domain (HHH_RecD2) (146-237)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
recD/recD2/recDB	Bacillus subtilis subsp. subtilis str. 168	41.944	90.048	0.378