Detailed information NTG0532057

Bioinformatically predicted

Overview

• Name: recD2
• Type: Machinery gene
• Locus tag: JNE45_RS12380
• Genome accession: NZ_CP069061
• Coordinates: 2441843..2444227 (-)
• Length: 794 a.a.
• NCBI ID: WP_203128679.1
• Uniprot ID: -
• Organism: Bacillus safensis strain F6
• Function: homologous recombination (predicted from homology) Homologous recombination

Genomic Context

Location: 2436843..2449227

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
JNE45_RS12345 (JNE45_12345)	-	2437866..2438594 (+)	729	WP_048238982.1	amino acid ABC transporter ATP-binding protein	-
JNE45_RS12350 (JNE45_12350)	-	2438608..2439417 (+)	810	WP_095409168.1	transporter substrate-binding domain-containing protein	-
JNE45_RS12355 (JNE45_12355)	-	2439495..2440148 (+)	654	WP_144471224.1	amino acid ABC transporter permease	-
JNE45_RS12360 (JNE45_12360)	-	2440164..2440814 (+)	651	WP_203128678.1	amino acid ABC transporter permease	-
JNE45_RS12365 (JNE45_12365)	-	2440894..2441025 (-)	132	WP_003216198.1	YrzQ family protein	-
JNE45_RS12370 (JNE45_12370)	-	2441046..2441237 (-)	192	WP_003216308.1	hypothetical protein	-
JNE45_RS12375 (JNE45_12375)	-	2441251..2441769 (-)	519	WP_095409171.1	PRC-barrel domain-containing protein	-
JNE45_RS12380 (JNE45_12380)	recD2	2441843..2444227 (-)	2385	WP_203128679.1	ATP-dependent RecD-like DNA helicase	Machinery gene
JNE45_RS12385 (JNE45_12385)	-	2444247..2444900 (-)	654	WP_025092425.1	tetratricopeptide repeat protein	-
JNE45_RS12390 (JNE45_12390)	mnmA	2444961..2446079 (-)	1119	WP_095409173.1	tRNA 2-thiouridine(34) synthase MnmA	-
JNE45_RS12395 (JNE45_12395)	-	2446174..2447316 (-)	1143	WP_203128680.1	cysteine desulfurase family protein	-
JNE45_RS12400 (JNE45_12400)	cymR	2447335..2447754 (-)	420	WP_024423125.1	cysteine metabolism transcriptional regulator CymR	-

Sequence

Protein

• Length: 794 a.a.
• Molecular weight: 89086.63 Da
• Isoelectric Point: 5.2628

>NTDB_id=532057 JNE45_RS12380 WP_203128679.1 2441843..2444227(-) (recD2) [Bacillus safensis strain F6]
MQEHPDQMKLEDEPFLKGTIQAVIFHNESNLYSVLKVKVIETSENLEEKTASVTGYFPALHEEETYTFYGKVTSHPKFGE
QFQATHFQKEVPTTKQGIIHYLSSDLFEGIGKKTAEEIVGQLGNQTLHKIMRDPAVLYDVPRLSKKKADKLAAALQEHQG
LEQIMISLNQYGFGPQLSMKIYQVYESETLQKIEENPYQLVKDVEGIGFIKADELGARTGISGNDPERIRAALLYTVETA
SLQDGHTYIQTKDLIVETRKLLNQTGNDYKVTEMDVANQIIALGEGKEMIIEDERCYHPSLFYAEQSVAKRIQKIVSQTE
YADQFPESEFLLALGELEERLGVQYAPTQKEAIQKALMSPMLLLTGGPGTGKTTVIKGIVELYSDLHGVSLDPSDYKKDE
SFPFVLAAPTGRAAKRMTESTGLPAVTIHRLLGWNGSEGFSHDEEQPIEGKLVIIDESSMLDIWLANHLFKAIPDHIQVI
MVGDEHQLPSVGPGQVLRDLLASKAVPAVTLTDIYRQADGSTIVELAHDMKNGVLPKDITARSKDRSFIQCSADQMKEVI
EKVVSNAAQKGFSAKDIQVLAPMYKGKAGINELNKMLQHILNPKKPKGREIPFGDVVYRTGDKVLQLVNQPENNIFNGDI
GEIVSIFYAKENTEKEDMAVISFDGNEITFTKKDFHQFTHAYCCSIHKSQGSEFPIVVLPVVRSYYRMLRRNLLYTAITR
SKKFLILCGEESALEWGVKNNEDSLRQTSLTMRLVQTEQIMDAELEALQKQLPFSVHDANIGMEGITPFDFMHE

Nucleotide

• Length: 2385 bp

>NTDB_id=532057 JNE45_RS12380 WP_203128679.1 2441843..2444227(-) (recD2) [Bacillus safensis strain F6]
GTGCAGGAACATCCAGATCAAATGAAGCTTGAGGACGAACCGTTTTTAAAGGGGACCATTCAAGCCGTTATTTTCCATAA
TGAAAGTAATTTATACTCGGTGTTAAAGGTGAAAGTCATTGAAACATCGGAAAACTTAGAGGAAAAAACAGCATCTGTCA
CAGGCTACTTCCCAGCACTTCATGAGGAGGAAACCTACACCTTCTATGGCAAAGTCACAAGCCATCCGAAATTTGGTGAA
CAGTTTCAGGCCACTCATTTTCAAAAGGAAGTACCGACAACGAAGCAAGGAATCATACATTATCTCTCAAGTGATTTATT
TGAGGGGATAGGAAAAAAGACGGCTGAAGAAATCGTGGGGCAGCTTGGCAATCAGACGCTCCATAAAATTATGCGTGACC
CAGCTGTTTTGTATGATGTTCCGCGCTTATCAAAAAAGAAGGCGGATAAGCTGGCCGCAGCGCTTCAGGAGCATCAAGGG
CTGGAACAAATCATGATCAGCTTGAATCAATATGGCTTTGGTCCACAGCTCAGCATGAAGATTTACCAAGTGTACGAAAG
TGAAACGCTGCAGAAAATCGAGGAAAATCCCTATCAGCTCGTTAAGGATGTCGAGGGGATCGGATTTATTAAGGCGGACG
AGCTTGGCGCTAGAACAGGCATCTCAGGAAATGACCCAGAGAGGATTCGTGCCGCCTTGCTATATACAGTGGAGACAGCT
AGTCTTCAGGACGGTCATACGTACATACAAACAAAAGATTTGATCGTCGAAACCCGCAAACTGCTCAACCAAACAGGCAA
TGATTACAAAGTGACTGAAATGGATGTCGCCAATCAGATTATTGCACTTGGCGAAGGAAAAGAAATGATCATTGAAGATG
AGCGCTGCTATCATCCATCTTTATTTTATGCGGAGCAAAGTGTCGCCAAACGCATTCAAAAAATCGTCTCCCAAACAGAA
TATGCAGATCAATTTCCTGAATCAGAATTTCTGCTTGCACTTGGGGAGCTGGAGGAGCGGTTAGGCGTTCAGTATGCACC
GACACAAAAGGAAGCGATTCAAAAGGCACTCATGTCCCCGATGCTGCTTTTAACAGGCGGGCCTGGAACAGGGAAGACAA
CAGTCATTAAAGGGATTGTCGAGCTTTACAGTGATCTTCACGGTGTATCACTTGATCCGAGTGATTATAAAAAAGATGAA
TCGTTCCCATTTGTACTTGCGGCACCAACTGGACGGGCGGCTAAACGGATGACAGAATCAACAGGGCTTCCAGCTGTCAC
CATTCACCGGCTGCTAGGCTGGAACGGTTCGGAGGGCTTCTCGCATGATGAGGAACAGCCGATTGAAGGAAAGCTTGTCA
TCATTGATGAATCAAGTATGCTGGATATTTGGCTGGCGAATCATTTGTTTAAAGCGATTCCTGATCATATTCAAGTGATT
ATGGTAGGGGATGAACATCAGCTGCCTTCTGTCGGACCAGGCCAAGTTTTACGGGATTTGCTTGCCTCAAAAGCCGTGCC
GGCTGTTACCTTGACAGATATTTACCGGCAGGCAGACGGCTCAACCATTGTTGAACTTGCACATGATATGAAAAATGGTG
TGCTGCCAAAGGATATAACTGCACGCTCAAAGGATCGGTCCTTCATTCAGTGTTCAGCTGATCAAATGAAAGAAGTCATT
GAGAAAGTCGTCAGCAATGCTGCTCAAAAAGGGTTTTCAGCAAAGGACATTCAAGTACTGGCACCGATGTATAAAGGAAA
AGCAGGCATCAATGAGCTCAACAAAATGCTGCAGCACATTTTGAATCCTAAAAAACCAAAAGGCAGAGAAATCCCGTTTG
GTGATGTGGTGTACCGGACAGGTGATAAGGTGCTTCAGCTTGTGAATCAGCCGGAGAACAACATTTTTAACGGCGATATC
GGTGAAATTGTCTCGATTTTTTATGCAAAAGAAAATACAGAAAAAGAAGACATGGCCGTCATCTCCTTTGATGGAAATGA
AATCACCTTTACGAAAAAGGATTTTCATCAATTTACACACGCCTATTGCTGCTCCATTCACAAATCACAAGGCAGTGAAT
TCCCAATTGTTGTCCTGCCAGTCGTGAGAAGCTACTACCGAATGCTTCGGCGGAATCTGCTGTACACAGCCATTACACGA
AGTAAAAAGTTTTTAATACTGTGCGGCGAGGAATCAGCGCTGGAGTGGGGCGTGAAAAACAATGAGGATTCCCTCAGACA
AACGTCCTTAACGATGCGGCTCGTGCAAACCGAACAAATCATGGATGCAGAACTTGAAGCGCTCCAAAAACAGCTTCCGT
TTAGCGTACATGACGCAAATATTGGCATGGAGGGAATCACTCCGTTTGATTTTATGCATGAGTAG

Domains

Predicted by InterproScan.

• AAA domain (AAA_30) (345-553)

• Helix-hairpin-helix containing domain (HHH_RecD2) (157-248)

• ATP-dependent RecD-like DNA helicase SH3 domain (SH3_13) (593-659)

• UvrD-like helicase C-terminal domain (UvrD_C_2) (680-728)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
recD2	Bacillus subtilis subsp. subtilis str. 168	79.523	100	0.797