Detailed information NTG0531722

Bioinformatically predicted

Overview

• Name: rarA
• Type: Machinery gene
• Locus tag: K9N54_RS05775
• Genome accession: NZ_CP083361
• Coordinates: 1254228..1255517 (+)
• Length: 429 a.a.
• NCBI ID: WP_021447448.1
• Uniprot ID: -
• Organism: Vibrio parahaemolyticus strain 20-082E4
• Function: homologous recombination (predicted from homology) Homologous recombination

Genomic Context

Location: 1249228..1260517

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
K9N54_RS05760 (K9N54_05750)	lrp	1249631..1250125 (+)	495	WP_005378234.1	leucine-responsive transcriptional regulator Lrp	-
K9N54_RS05765 (K9N54_05755)	-	1250278..1253460 (+)	3183	WP_156216583.1	DNA translocase FtsK 4TM domain-containing protein	-
K9N54_RS05770 (K9N54_05760)	lolA	1253535..1254161 (+)	627	WP_005460060.1	outer membrane lipoprotein chaperone LolA	-
K9N54_RS05775 (K9N54_05765)	rarA	1254228..1255517 (+)	1290	WP_021447448.1	replication-associated recombination protein A	Machinery gene
K9N54_RS05780 (K9N54_05770)	serS	1255609..1256916 (+)	1308	WP_005495761.1	serine--tRNA ligase	-
K9N54_RS05785 (K9N54_05775)	-	1257286..1257852 (+)	567	WP_224067080.1	ATPase	-
K9N54_RS05790 (K9N54_05780)	-	1257852..1258286 (+)	435	WP_224067094.1	hypothetical protein	-
K9N54_RS05795 (K9N54_05785)	-	1258421..1258687 (+)	267	WP_015296513.1	DksA/TraR family C4-type zinc finger protein	-
K9N54_RS05800 (K9N54_05790)	bioA	1258757..1260037 (-)	1281	WP_025791983.1	adenosylmethionine--8-amino-7-oxononanoate transaminase	-

Sequence

Protein

• Length: 429 a.a.
• Molecular weight: 47564.76 Da
• Isoelectric Point: 5.8532

>NTDB_id=531722 K9N54_RS05775 WP_021447448.1 1254228..1255517(+) (rarA) [Vibrio parahaemolyticus strain 20-082E4]
MRPQTIEQYIGQQHILGPGKPLRRALEAGHVHSMILWGPPGTGKTTLAEVAANYANAEVERVSAVTSGVKEIRAAIEKAR
ENKMAGRRTILFVDEVHRFNKSQQDAFLPHIEDGTVTFIGATTENPSFELNNALLSRARVYKLTSLDKEEISLALNQAIN
DKERGLGDTPANFADNVLDRLAELVNGDARMSLNYLELLYDMAEDNAQGEKEITLKLLAEVAGEKVSRFDNKGDIWYDLI
SAVHKSIRGSNPDAALYWAARMIAAGCDPLYIARRLLAIASEDVGNADPRAMQVALSAWDCFTRVGPAEGERAIAQAIVY
LACAPKSNAVYVAWKQALTDAHNLPEYEVPHHLRNAPTSLMKDMGYGAEYRYAHDEPGAYAAGEQYLPPEMADRKYYQPT
NRGLETKIGEKLDYLAKLDANSQQKRYEK

Nucleotide

• Length: 1290 bp

>NTDB_id=531722 K9N54_RS05775 WP_021447448.1 1254228..1255517(+) (rarA) [Vibrio parahaemolyticus strain 20-082E4]
ATGAGACCGCAAACTATTGAGCAGTACATCGGTCAGCAACACATTCTTGGCCCGGGTAAACCCCTGCGTCGCGCGTTAGA
GGCTGGCCATGTCCACTCAATGATCCTTTGGGGGCCTCCTGGTACAGGTAAAACCACGTTAGCGGAAGTCGCTGCTAATT
ACGCCAATGCGGAAGTTGAACGCGTGTCTGCGGTGACGTCCGGTGTGAAAGAGATTCGTGCTGCAATCGAAAAAGCGCGC
GAGAACAAAATGGCGGGTCGCCGCACCATCTTGTTTGTGGATGAGGTTCATCGCTTCAACAAATCGCAACAAGATGCTTT
CTTACCACATATTGAAGATGGAACCGTCACGTTTATTGGCGCAACGACAGAGAACCCATCTTTCGAACTGAATAACGCAT
TGTTGTCTCGTGCTCGAGTCTACAAGCTGACTTCACTGGATAAAGAAGAGATCTCACTCGCACTAAATCAAGCGATTAAC
GACAAAGAACGAGGCCTGGGCGATACGCCAGCGAACTTTGCTGATAATGTGTTAGACCGTCTAGCCGAGTTGGTGAACGG
CGATGCTCGCATGTCGCTTAACTACCTTGAACTTCTCTACGATATGGCAGAGGACAATGCGCAGGGTGAAAAAGAGATAA
CACTCAAACTGCTTGCTGAAGTAGCCGGGGAGAAAGTCTCTCGCTTCGATAATAAAGGCGACATTTGGTACGATTTGATC
TCCGCTGTGCACAAATCTATTCGTGGATCAAACCCAGATGCCGCTTTGTATTGGGCTGCTCGTATGATAGCTGCAGGTTG
TGATCCACTTTACATTGCCCGTCGATTACTTGCGATAGCATCGGAAGATGTCGGCAATGCGGACCCTAGAGCCATGCAAG
TTGCACTCTCCGCGTGGGACTGTTTTACACGCGTTGGTCCAGCAGAGGGTGAGCGTGCGATTGCTCAAGCAATTGTTTAT
CTCGCGTGCGCTCCAAAGAGTAATGCCGTTTATGTTGCTTGGAAACAAGCGCTCACTGACGCACATAACTTGCCTGAATA
TGAAGTGCCGCATCACTTGCGTAATGCACCCACCAGTCTGATGAAAGACATGGGCTATGGCGCAGAATATCGATATGCTC
ACGACGAGCCGGGTGCTTATGCTGCGGGTGAGCAATATTTGCCACCAGAAATGGCGGATCGTAAGTACTATCAGCCGACA
AATCGCGGTCTAGAAACCAAAATCGGCGAAAAGTTAGATTACTTGGCTAAATTAGACGCAAATAGCCAACAAAAGCGCTA
TGAAAAGTAG

Domains

Predicted by InterProScan.

• ATPase family associated with various cellular activities (AAA) (AAA) (34-139)

• MgsA AAA+ ATPase C terminal (MgsA_C) (249-415)

• AAA C-terminal domain (AAA_assoc_2) (170-248)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
rarA	Bacillus subtilis subsp. subtilis str. 168	39.474	97.436	0.385