Detailed information NTG0530880

Bioinformatically predicted

Overview

• Name: pilQ
• Type: Machinery gene
• Locus tag: DRO_RS03955
• Genome accession: NZ_CP068791
• Coordinates: 788499..789767 (+)
• Length: 422 a.a.
• NCBI ID: WP_227086002.1
• Uniprot ID: -
• Organism: Deinococcus radiodurans R1 = ATCC 13939 = DSM 20539 strain R1
• Function: assembly of type IV pilus (predicted from homology) DNA binding and uptake

Genomic Context

Location: 783499..794767

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
DRO_RS03940 (DRO_0767)	-	784265..784981 (+)	717	WP_010887417.1	hypothetical protein	-
DRO_RS03945 (DRO_0768)	-	784978..785637 (+)	660	WP_010887418.1	type 4a pilus biogenesis protein PilO	-
DRO_RS03950 (DRO_0769)	-	785634..787541 (+)	1908	WP_010887419.1	hypothetical protein	-
DRO_RS03955 (DRO_0770)	pilQ	788499..789767 (+)	1269	WP_227086002.1	type II secretion system protein GspD	Machinery gene
DRO_RS03960 (DRO_0771)	aroC	790031..791179 (+)	1149	WP_010887421.1	chorismate synthase	-
DRO_RS03965 (DRO_0772)	-	791187..791903 (+)	717	WP_010887422.1	shikimate kinase	-
DRO_RS03970 (DRO_0773)	aroB	791890..792942 (+)	1053	WP_010887423.1	3-dehydroquinate synthase	-
DRO_RS03975 (DRO_0774)	aroQ	793091..793522 (+)	432	WP_010887424.1	type II 3-dehydroquinate dehydratase	-
DRO_RS03980 (DRO_0775)	-	793519..794496 (+)	978	WP_027479984.1	alpha/beta hydrolase	-

Sequence

Protein

• Length: 422 a.a.
• Molecular weight: 44190.66 Da
• Isoelectric Point: 5.4747

>NTDB_id=530880 DRO_RS03955 WP_227086002.1 788499..789767(+) (pilQ) [Deinococcus radiodurans R1 = ATCC 13939 = DSM 20539 strain R1]
MQRIYTVRGQAADITALLAAQYPTLRVTPVGQTGQLVLNGAQAQLDTALALLEQVDRPAPVAESRTVQRVFQLVNASAEE
VKATLEGTLARDLTADSNNDVLPNVPVTATDANGNTTVVSVPNALGKTANQGTANAQAQTAQTPANTQQATLIADKRTNS
LIVRGTPEQVAQVAELVPQLDQVVPQINVQVRIQEVNERALQSLGLNWRATFGGFNVAVSGGTGLAATFNPTQSFLGFNI
FPTLTALETQGLTRRVYDGNVTMQSGQRSLSATGGAQNASSGAAASVKSGGRLEINIPSAAGNIVRQIDYGLNLDFFSPQ
VAPDGTITLRIRGQVNQPATAITADSLPNLIDFTNSEAQSTITFKNGQTILMSGLLGSTETTNRSGVPFLSSLPGVGAAF
GEKRTEKTQSQLLVIITGTVVK

Nucleotide

• Length: 1269 bp

>NTDB_id=530880 DRO_RS03955 WP_227086002.1 788499..789767(+) (pilQ) [Deinococcus radiodurans R1 = ATCC 13939 = DSM 20539 strain R1]
GTGCAGCGCATCTACACCGTGCGCGGCCAGGCCGCCGACATCACGGCGCTGCTCGCTGCCCAGTACCCTACCCTGCGCGT
GACCCCGGTGGGGCAGACCGGCCAACTGGTGCTCAACGGCGCTCAGGCCCAGCTCGACACGGCGCTCGCCCTGCTCGAAC
AGGTGGACCGCCCCGCCCCGGTGGCCGAGTCCCGTACCGTTCAGCGCGTCTTCCAGCTCGTCAACGCCAGCGCTGAGGAA
GTCAAGGCGACCCTGGAAGGCACCCTGGCGCGTGACCTGACCGCCGACAGCAATAACGACGTGCTGCCCAACGTGCCCGT
CACCGCCACCGACGCCAACGGCAACACGACCGTGGTGAGCGTGCCCAACGCGCTCGGCAAGACGGCGAACCAGGGCACGG
CGAATGCTCAGGCTCAGACTGCCCAGACTCCGGCCAACACCCAGCAGGCGACCCTGATCGCCGACAAGCGCACCAACAGC
CTGATCGTGCGCGGCACGCCCGAACAGGTGGCGCAGGTGGCCGAGCTGGTGCCGCAGCTCGATCAGGTGGTGCCGCAGAT
CAACGTGCAGGTGCGGATTCAGGAGGTCAACGAGCGAGCGCTGCAATCGCTGGGCCTCAACTGGCGGGCGACCTTCGGTG
GCTTCAACGTGGCGGTCTCGGGCGGCACCGGGCTGGCGGCCACCTTCAACCCCACCCAGAGCTTCCTCGGTTTCAACATT
TTCCCGACCCTCACGGCGCTCGAAACCCAGGGCCTGACCCGGCGCGTGTACGACGGCAACGTGACCATGCAAAGCGGCCA
GCGCTCGCTGAGTGCCACGGGCGGCGCCCAGAACGCTTCGAGCGGCGCGGCGGCCAGCGTCAAGAGTGGGGGCCGACTGG
AAATCAACATCCCCTCGGCGGCGGGCAACATCGTGCGGCAGATCGATTACGGTCTCAACCTCGATTTCTTCAGCCCGCAG
GTGGCGCCCGACGGCACCATCACCCTGCGTATTCGCGGTCAGGTCAACCAGCCGGCAACGGCGATCACCGCCGACAGCCT
GCCCAACCTCATCGACTTCACCAACAGCGAAGCGCAAAGCACCATCACCTTCAAGAACGGCCAGACCATCCTGATGAGCG
GCCTGCTCGGCAGCACCGAGACCACCAACCGCAGCGGCGTGCCCTTCCTGAGCAGCCTGCCCGGTGTGGGCGCGGCCTTC
GGGGAAAAACGCACCGAGAAGACCCAGTCGCAACTGCTCGTCATCATCACCGGCACCGTCGTCAAATAA

Domains

Predicted by InterproScan.

• Bacterial type II and III secretion system protein (Secretin) (279-422)

• Bacterial type II/III secretion system short domain (Secretin_N) (69-185)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
pilQ	Deinococcus radiodurans R1 = ATCC 13939 = DSM 20539	100	100	1