Detailed information NTG0530875

Bioinformatically predicted

Overview

• Name: uvrB
• Type: Machinery gene
• Locus tag: K8351_RS08780
• Genome accession: NZ_CP082947
• Coordinates: 1652570..1654543 (+)
• Length: 657 a.a.
• NCBI ID: WP_057037150.1
• Uniprot ID: -
• Organism: Campylobacter coli strain C203016
• Function: homologous recombination (predicted from homology) Homologous recombination

Genomic Context

Location: 1647570..1659543

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
K8351_RS08750 (K8351_08725)	flgH	1647758..1648456 (+)	699	WP_002787400.1	flagellar basal body L-ring protein FlgH	-
K8351_RS08755 (K8351_08730)	ispG	1648540..1649613 (-)	1074	WP_002776443.1	flavodoxin-dependent (E)-4-hydroxy-3-methylbut-2-enyl-diphosphate synthase	-
K8351_RS08760 (K8351_08735)	-	1649673..1651511 (-)	1839	WP_002776439.1	primosomal protein N'	-
K8351_RS08765 (K8351_08740)	Cj0683	1651508..1651954 (-)	447	WP_002776437.1	type II secretion system protein	Machinery gene
K8351_RS08770 (K8351_08745)	-	1651951..1652196 (-)	246	WP_002776428.1	hypothetical protein	-
K8351_RS08775 (K8351_08750)	-	1652186..1652416 (-)	231	WP_002776426.1	hypothetical protein	-
K8351_RS08780 (K8351_08755)	uvrB	1652570..1654543 (+)	1974	WP_057037150.1	excinuclease ABC subunit UvrB	Machinery gene
K8351_RS08785 (K8351_08760)	-	1654578..1656002 (-)	1425	WP_002776421.1	anaerobic C4-dicarboxylate transporter	-
K8351_RS08790 (K8351_08765)	-	1656189..1657439 (-)	1251	WP_002776420.1	RNA polymerase factor sigma-54	-
K8351_RS08795 (K8351_08770)	lptB	1657439..1658167 (-)	729	WP_002776419.1	LPS export ABC transporter ATP-binding protein	-
K8351_RS08800 (K8351_08775)	tsaE	1658160..1658567 (-)	408	WP_057037151.1	tRNA (adenosine(37)-N6)-threonylcarbamoyltransferase complex ATPase subunit type 1 TsaE	-
K8351_RS08805 (K8351_08780)	-	1658564..1658809 (-)	246	WP_002776417.1	RNA-binding S4 domain-containing protein	-

Sequence

Protein

• Length: 657 a.a.
• Molecular weight: 75997.40 Da
• Isoelectric Point: 6.4586

>NTDB_id=530875 K8351_RS08780 WP_057037150.1 1652570..1654543(+) (uvrB) [Campylobacter coli strain C203016]
MLELTSDFKPSPDQEQAIQGIVKSIKKGNKYQTLLGVTGSGKTFTMANVIKELNMPTLIMSHNKSLCAQLYSEFKGFFSK
NHVEYFISYYDYYQPEAYIPRTDVFIEKDSSTNEDLERLRLSATASLLSYEDVVCIASVSANYGLGNPNEYIGMVLIFEL
DMQISQKELLKKLVDMGYKRNDNFFDRADFRVQGDIIDIYPAYYEDEVVRLEFFGDELDAMYHYNVLENKKGKDLKRFIL
YPTSQFSVGETRLKQAIKDIKAELNERLAYFEHENKLVEYQRLKQRVEFDLEMLASTGMCKGVENYARHLTGLKEGDTPY
TLFDYFAIKNRKFLVIVDESHVSLPQFRGMFAGDRSRKQTLVDYGFRLPSALDNRPLMFDEFIHKDCQFLFVSATPAPLE
LELSKENIFHQIMRPTGLLDPLIELKDSDNQVEILFDEAKKVIQRNERVLVTVLTKKLAEELTRYYLELGIKVKYMHSDI
DAIERNEIIRGLRSGAFDMLIGINLLREGLDLPEVSLIAIMDADKEGFLRSTTSLIQTMGRAARNVNGKVLLFCKKITKS
MQEAMDTTNERRKLQEAYNQKHNITPTSVKRHIEESLKNEENLGEIYRKGKKIEKMPANERTKIVKELRKQMLEAAKALE
FEKAATLRDEINKLKDL

Nucleotide

• Length: 1974 bp

>NTDB_id=530875 K8351_RS08780 WP_057037150.1 1652570..1654543(+) (uvrB) [Campylobacter coli strain C203016]
ATGTTAGAACTTACAAGCGATTTTAAACCAAGTCCTGATCAAGAACAAGCAATACAAGGTATTGTCAAAAGCATAAAAAA
AGGTAATAAATATCAAACCCTACTCGGCGTAACAGGAAGCGGAAAGACTTTTACCATGGCAAATGTCATAAAAGAACTCA
ATATGCCAACCCTTATCATGAGTCATAACAAAAGCCTTTGCGCCCAGCTTTATAGCGAATTTAAAGGTTTTTTTTCTAAG
AACCATGTGGAATATTTTATTTCTTATTATGATTATTATCAGCCTGAAGCTTATATACCGCGCACCGATGTTTTTATAGA
AAAAGATAGCTCCACAAATGAGGATCTAGAACGCTTAAGACTTAGCGCAACTGCTTCGCTTTTAAGCTATGAGGATGTGG
TTTGTATCGCTAGTGTCTCGGCTAATTATGGACTTGGAAATCCAAATGAATACATAGGAATGGTTTTAATCTTTGAACTA
GACATGCAAATTTCACAAAAAGAACTTTTAAAGAAACTTGTAGACATGGGTTATAAAAGAAATGATAATTTCTTTGATCG
TGCTGATTTTCGCGTACAAGGTGATATTATAGATATTTATCCTGCTTATTACGAAGATGAAGTAGTAAGACTTGAATTTT
TTGGTGATGAACTGGATGCAATGTATCATTATAATGTTTTAGAAAATAAAAAAGGCAAAGATTTAAAACGCTTCATACTT
TATCCTACAAGCCAGTTTAGTGTAGGTGAAACAAGACTAAAACAAGCGATAAAAGACATAAAAGCAGAACTTAACGAACG
CCTTGCTTATTTTGAACATGAAAATAAACTCGTAGAATACCAACGCCTTAAACAACGCGTTGAATTTGATCTTGAAATGC
TTGCAAGCACAGGGATGTGCAAAGGGGTTGAAAACTATGCTAGACATTTAACAGGGCTTAAAGAAGGCGATACGCCTTAT
ACACTTTTTGATTATTTTGCTATTAAAAATAGGAAATTTCTTGTTATTGTAGACGAAAGCCATGTTTCTTTACCACAATT
TCGCGGTATGTTTGCAGGAGATAGAAGTAGAAAGCAAACTTTAGTAGATTATGGTTTTCGTCTTCCATCAGCTCTTGATA
ATCGTCCTTTAATGTTTGATGAATTTATCCATAAAGATTGTCAGTTTCTTTTTGTTTCAGCCACCCCTGCCCCGCTTGAG
CTTGAACTTAGCAAGGAAAATATCTTTCATCAAATTATGCGTCCAACAGGATTACTTGATCCTTTGATAGAACTTAAAGA
TAGCGATAATCAAGTTGAAATTTTATTTGATGAAGCCAAAAAAGTTATACAAAGAAACGAACGCGTTTTAGTTACTGTGT
TGACTAAAAAACTAGCTGAAGAGCTTACAAGGTATTATTTAGAACTTGGTATTAAAGTAAAATACATGCATTCAGATATT
GATGCAATAGAACGCAATGAAATCATAAGAGGCTTAAGAAGCGGTGCTTTTGATATGTTAATAGGTATAAATTTACTTAG
AGAAGGACTTGATTTGCCTGAGGTTTCGCTTATTGCCATTATGGACGCAGATAAGGAGGGTTTTTTAAGAAGCACTACAA
GTTTAATCCAAACCATGGGAAGAGCTGCTAGAAATGTCAATGGTAAAGTTTTACTCTTTTGCAAAAAGATTACAAAATCC
ATGCAAGAAGCTATGGATACTACAAATGAGCGTCGCAAACTTCAAGAAGCTTACAATCAAAAACATAACATCACCCCAAC
TTCAGTCAAGCGACACATCGAAGAAAGTTTAAAAAATGAAGAAAACTTAGGAGAAATTTATCGCAAAGGTAAAAAAATTG
AAAAAATGCCTGCTAATGAAAGAACTAAAATCGTAAAAGAGCTTCGTAAACAAATGCTTGAAGCTGCTAAAGCGCTCGAA
TTTGAAAAAGCAGCGACTTTAAGAGATGAGATCAATAAATTAAAAGATTTATAG

Domains

Predicted by InterProScan.

• UvrB/uvrC motif (UVR) (623-656)

• Type III restriction enzyme, res subunit (ResIII) (8-116)

• Ultra-violet resistance protein B (UvrB) (552-593)

• Helicase conserved C-terminal domain (Helicase_C) (439-544)

• UvrB interaction domain (UvrB_inter) (158-246)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
uvrB	Streptococcus pneumoniae TIGR4	50.457	99.848	0.504
uvrB	Streptococcus pneumoniae R6	50.457	99.848	0.504
uvrB	Streptococcus pneumoniae D39	50.457	99.848	0.504