Detailed information    

insolico Bioinformatically predicted

Overview

Name   rcrP   Type   Regulator
Locus tag   K8B76_RS10820 Genome accession   NZ_CP082820
Coordinates   1381037..1381759 (-) Length   240 a.a.
NCBI ID   WP_001010371.1    Uniprot ID   -
Organism   Streptococcus pneumoniae strain SCAID PHRX1-2021     
Function   regulate competence (predicted from homology)   
Competence regulation

Genomic Context

Location: 1376037..1386759
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  K8B76_RS06780 (K8B76_06780) - 1378612..1379778 (-) 1167 WP_000521375.1 MalY/PatB family protein -
  K8B76_RS06785 (K8B76_06785) - 1379786..1380880 (-) 1095 WP_000031972.1 cystathionine gamma-synthase -
  K8B76_RS10820 rcrP 1381037..1381759 (-) 723 WP_001010371.1 ABC transporter ATP-binding protein Regulator
  K8B76_RS10825 - 1381946..1382719 (-) 774 Protein_1360 ABC transporter ATP-binding protein -
  K8B76_RS06795 (K8B76_06795) amiA 1382891..1384849 (-) 1959 WP_000748880.1 peptide ABC transporter substrate-binding protein Regulator
  K8B76_RS06800 (K8B76_06800) - 1385053..1386675 (-) 1623 WP_000017793.1 polysaccharide biosynthesis protein -

Sequence

Protein


Download         Length: 240 a.a.        Molecular weight: 27132.92 Da        Isoelectric Point: 4.9157

>NTDB_id=529673 K8B76_RS10820 WP_001010371.1 1381037..1381759(-) (rcrP) [Streptococcus pneumoniae strain SCAID PHRX1-2021]
MNFNHVYFGYDENRPVLKDITCSIFKGQKIAFVGPSGSGKSTIVRLLERFYKPLSGDILMEQSSIYDFNLKEWRSKIAWV
SQNNAVLSGSIRDNLCLGLNRLVTDDELMKVLDLVSLGDEIRSMKEGLDTEVGERGRFLSGGQSQRLQIARTYLKDAEIL
IFDEATANLDADSEYAIISSLYSVLKEKTVVIIAHSLSTVKDVDCIFFLEEGKITGSGTHKELLENHERYARFVQEQMIE

Nucleotide


Download         Length: 723 bp        

>NTDB_id=529673 K8B76_RS10820 WP_001010371.1 1381037..1381759(-) (rcrP) [Streptococcus pneumoniae strain SCAID PHRX1-2021]
TTGAATTTTAACCATGTCTATTTTGGTTATGATGAAAATCGACCTGTCTTAAAGGATATTACTTGTTCAATTTTCAAGGG
GCAAAAAATTGCTTTTGTTGGACCATCTGGATCAGGAAAATCAACGATTGTGCGTTTGTTAGAGCGGTTTTATAAACCGC
TTTCAGGAGATATTCTAATGGAGCAATCAAGTATATATGATTTTAACTTAAAAGAATGGAGAAGTAAAATCGCTTGGGTT
TCACAAAATAATGCAGTCTTATCTGGCAGTATTCGTGACAATCTTTGTCTCGGTTTGAATCGCTTAGTAACTGATGATGA
ATTGATGAAAGTGCTAGACTTAGTATCACTAGGTGATGAGATTCGCTCCATGAAAGAGGGACTAGATACTGAAGTTGGTG
AACGCGGACGATTCTTGTCAGGGGGGCAAAGCCAAAGACTTCAAATAGCTAGAACCTACTTAAAAGATGCTGAAATTCTT
ATATTTGATGAAGCTACTGCTAATCTTGATGCGGATTCTGAGTATGCGATTATCAGTAGCCTCTATTCTGTATTAAAGGA
GAAGACGGTTGTGATTATAGCGCATAGTTTGTCAACGGTAAAAGATGTGGATTGTATTTTCTTCTTAGAGGAGGGGAAAA
TCACTGGCTCAGGAACTCATAAGGAACTACTGGAAAATCATGAGCGTTATGCTCGTTTTGTGCAGGAGCAAATGATAGAG
TGA

Domains

Predicted by InterProScan.

ABC transporter (ABC_tran)

(17-167)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  rcrP Streptococcus mutans UA159

36.402

99.583

0.363