Detailed information    

insolico Bioinformatically predicted

Overview

Name   ctsG   Type   Machinery gene
Locus tag   JL477_RS06770 Genome accession   NZ_CP068567
Coordinates   1297512..1298027 (-) Length   171 a.a.
NCBI ID   WP_057044125.1    Uniprot ID   -
Organism   Campylobacter jejuni strain CC19PF065     
Function   type II secretion system/type IV pilin; DNA uptake (predicted from homology)   
DNA binding and uptake

Genomic Context

Location: 1292512..1303027
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  JL477_RS06755 (JL477_06755) - 1292615..1294432 (-) 1818 WP_212203129.1 motility associated factor glycosyltransferase family protein -
  JL477_RS06760 (JL477_06760) - 1294429..1296261 (-) 1833 WP_212203131.1 motility associated factor glycosyltransferase family protein -
  JL477_RS06765 (JL477_06765) - 1296271..1297512 (-) 1242 WP_212147442.1 DUF2920 family protein -
  JL477_RS06770 (JL477_06770) ctsG 1297512..1298027 (-) 516 WP_057044125.1 type II secretion system protein Machinery gene
  JL477_RS06775 (JL477_06775) tsaD 1298028..1299035 (-) 1008 WP_057044126.1 tRNA (adenosine(37)-N6)-threonylcarbamoyltransferase complex transferase subunit TsaD -
  JL477_RS06780 (JL477_06780) - 1299032..1300426 (-) 1395 WP_057044127.1 M99 family carboxypeptidase catalytic domain-containing protein -
  JL477_RS06785 (JL477_06785) dxr 1300428..1301498 (-) 1071 WP_212147440.1 1-deoxy-D-xylulose-5-phosphate reductoisomerase -
  JL477_RS06790 (JL477_06790) cdsA 1301495..1302220 (-) 726 WP_052782285.1 phosphatidate cytidylyltransferase -
  JL477_RS06795 (JL477_06795) - 1302229..1302567 (-) 339 WP_136696331.1 hypothetical protein -

Sequence

Protein


Download         Length: 171 a.a.        Molecular weight: 18677.53 Da        Isoelectric Point: 6.4682

>NTDB_id=529588 JL477_RS06770 WP_057044125.1 1297512..1298027(-) (ctsG) [Campylobacter jejuni strain CC19PF065]
MKKAFTILELVFVIVILGILAAIALPKMSSSKDEAEVSKSLNNLKTLINDISIYTLKNDHLSSIKTMSNVSGVENVDLGN
FNGTKEVNFRVGDDKECLKLLFINKADFILMGISSNEASKNAIINAANQSHEDLENIDFTSSSNNKACVILSKNENFKNL
ASKTYLLIGGM

Nucleotide


Download         Length: 516 bp        

>NTDB_id=529588 JL477_RS06770 WP_057044125.1 1297512..1298027(-) (ctsG) [Campylobacter jejuni strain CC19PF065]
ATGAAAAAAGCTTTTACCATATTAGAACTTGTTTTTGTGATTGTTATTTTAGGAATTTTAGCCGCTATTGCTTTACCAAA
AATGAGTTCAAGCAAGGATGAAGCTGAAGTTAGTAAGTCTTTAAATAACCTTAAAACTTTGATTAATGATATAAGCATTT
ATACTTTAAAAAATGATCATTTAAGCTCTATAAAAACGATGAGTAATGTAAGTGGGGTTGAAAATGTCGATCTTGGCAAT
TTTAATGGCACAAAAGAAGTAAATTTTCGCGTAGGCGATGATAAAGAATGCTTAAAACTTCTTTTTATAAATAAAGCTGA
TTTTATACTCATGGGAATTTCAAGCAATGAAGCAAGTAAAAATGCTATCATTAACGCAGCTAATCAAAGCCATGAAGATT
TAGAAAATATAGACTTTACAAGCTCTTCTAATAATAAAGCTTGTGTGATCTTAAGCAAGAATGAAAATTTTAAAAACCTA
GCGAGTAAAACTTATCTTTTAATAGGGGGAATGTAA

Domains

Predicted by InterproScan.

Prokaryotic N-terminal methylation motif (N_methyl)

(2-25)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  ctsG Campylobacter jejuni subsp. jejuni 81-176

92.982

100

0.93