Detailed information    

insolico Bioinformatically predicted

Overview

Name   ctsG   Type   Machinery gene
Locus tag   JMJ69_RS02395 Genome accession   NZ_CP068566
Coordinates   466899..467414 (+) Length   171 a.a.
NCBI ID   WP_002780549.1    Uniprot ID   A0A3Z9GFK4
Organism   Campylobacter coli strain CC19DZ037     
Function   type II secretion system/type IV pilin; DNA uptake (predicted from homology)   
DNA binding and uptake

Genomic Context

Location: 461899..472414
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  JMJ69_RS02370 (JMJ69_02370) - 462355..462693 (+) 339 WP_002777761.1 hypothetical protein -
  JMJ69_RS02375 (JMJ69_02375) - 462702..463427 (+) 726 WP_057038164.1 phosphatidate cytidylyltransferase -
  JMJ69_RS02380 (JMJ69_02380) dxr 463424..464500 (+) 1077 WP_002806266.1 1-deoxy-D-xylulose-5-phosphate reductoisomerase -
  JMJ69_RS02385 (JMJ69_02385) - 464497..465891 (+) 1395 WP_192800391.1 M99 family carboxypeptidase catalytic domain-containing protein -
  JMJ69_RS02390 (JMJ69_02390) tsaD 465888..466895 (+) 1008 WP_212202787.1 tRNA (adenosine(37)-N6)-threonylcarbamoyltransferase complex transferase subunit TsaD -
  JMJ69_RS02395 (JMJ69_02395) ctsG 466899..467414 (+) 516 WP_002780549.1 type II secretion system protein Machinery gene
  JMJ69_RS02400 (JMJ69_02400) - 467414..468655 (+) 1242 WP_192801513.1 DUF2920 family protein -
  JMJ69_RS02405 (JMJ69_02405) - 468667..470499 (+) 1833 WP_212202788.1 motility associated factor glycosyltransferase family protein -
  JMJ69_RS02410 (JMJ69_02410) - 470496..472313 (+) 1818 WP_212202789.1 motility associated factor glycosyltransferase family protein -

Sequence

Protein


Download         Length: 171 a.a.        Molecular weight: 18764.60 Da        Isoelectric Point: 6.4693

>NTDB_id=529557 JMJ69_RS02395 WP_002780549.1 466899..467414(+) (ctsG) [Campylobacter coli strain CC19DZ037]
MKRAFTILELVFVIVILGILAAIALPKFSSSRDEAEVSKSLNNLKTLINDISIYTLKNDHLSSIKTMSNVSGVENVDLSN
FNGIKEVNFRVGDEKECLKLVFINKADFILMGISSNEASKNAIINAANQSHEDLENIDFTSSSSNKACVILSKNENFKNL
ASKTYLLIGGM

Nucleotide


Download         Length: 516 bp        

>NTDB_id=529557 JMJ69_RS02395 WP_002780549.1 466899..467414(+) (ctsG) [Campylobacter coli strain CC19DZ037]
GTGAAAAGAGCTTTTACTATATTAGAACTTGTTTTTGTTATCGTGATTTTAGGAATTTTAGCAGCGATTGCTTTGCCAAA
ATTCAGTTCTAGTAGAGATGAAGCTGAAGTGAGTAAATCCTTAAACAATCTTAAAACTTTAATCAATGATATAAGCATTT
ATACTTTAAAAAATGATCATTTAAGCTCTATAAAAACGATGAGTAATGTAAGCGGGGTTGAAAATGTTGATCTTAGTAAT
TTTAACGGTATAAAAGAAGTAAATTTTCGCGTAGGCGATGAGAAAGAATGCTTAAAACTTGTTTTTATAAATAAAGCTGA
TTTTATACTCATGGGAATTTCAAGCAATGAAGCAAGTAAAAATGCTATCATTAACGCAGCCAATCAAAGCCATGAAGATT
TAGAAAATATAGACTTTACAAGCTCTTCTAGTAATAAAGCTTGTGTGATTTTAAGTAAGAATGAAAATTTTAAAAACCTA
GCGAGTAAAACTTATCTTTTAATAGGGGGAATGTAA

Domains

Predicted by InterproScan.

Prokaryotic N-terminal methylation motif (N_methyl)

(2-25)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure
  AlphaFold DB A0A3Z9GFK4

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  ctsG Campylobacter jejuni subsp. jejuni 81-176

91.813

100

0.918