Detailed information    

insolico Bioinformatically predicted

Overview

Name   rcrP   Type   Regulator
Locus tag   K7G42_RS10705 Genome accession   NZ_CP082783
Coordinates   2035981..2037690 (-) Length   569 a.a.
NCBI ID   WP_004235128.1    Uniprot ID   A0ABN0IQC1
Organism   Streptococcus parauberis strain KRS02083     
Function   regulate competence (predicted from homology)   
Competence regulation

Genomic Context

Location: 2030981..2042690
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  K7G42_RS10680 (K7G42_10600) - 2031126..2031569 (-) 444 WP_004235137.1 dUTP diphosphatase -
  K7G42_RS10685 (K7G42_10605) - 2031728..2032087 (-) 360 WP_004235135.1 YbaN family protein -
  K7G42_RS10690 (K7G42_10610) - 2032267..2032869 (+) 603 WP_003104239.1 NADPH-dependent FMN reductase -
  K7G42_RS10695 (K7G42_10615) - 2032888..2034147 (+) 1260 WP_004235131.1 NAD(P)H-dependent oxidoreductase -
  K7G42_RS10700 (K7G42_10620) - 2034197..2035981 (-) 1785 WP_013794470.1 ABC transporter ATP-binding protein -
  K7G42_RS10705 (K7G42_10625) rcrP 2035981..2037690 (-) 1710 WP_004235128.1 ABC transporter ATP-binding protein Regulator
  K7G42_RS10710 (K7G42_10630) rcrR 2037683..2038132 (-) 450 WP_004235125.1 MarR family winged helix-turn-helix transcriptional regulator Regulator
  K7G42_RS10715 (K7G42_10635) - 2038339..2039355 (+) 1017 WP_003107779.1 NAD(P)H-dependent glycerol-3-phosphate dehydrogenase -
  K7G42_RS10720 (K7G42_10640) galU 2039377..2040282 (+) 906 WP_004235122.1 UTP--glucose-1-phosphate uridylyltransferase GalU -
  K7G42_RS10725 (K7G42_10645) - 2040305..2040979 (-) 675 WP_003107780.1 rhomboid family intramembrane serine protease -
  K7G42_RS10730 (K7G42_10650) - 2040976..2041503 (-) 528 WP_004235118.1 5-formyltetrahydrofolate cyclo-ligase -

Sequence

Protein


Download         Length: 569 a.a.        Molecular weight: 62857.68 Da        Isoelectric Point: 5.6446

>NTDB_id=529276 K7G42_RS10705 WP_004235128.1 2035981..2037690(-) (rcrP) [Streptococcus parauberis strain KRS02083]
MLKNAIMRYKWYALGSVLMIIAVVASALLQPHYLKDVLSAVMKNDTDKITEVGQLLLIIAGVGLIAGTVNTILAAKIAQG
VSADIREKVFRKIQSFSYANVEEFNAGNLVVRMTNDVNQIQNLVMMIFQVLLRLPILFIGAFIMAVNTLPKLWWVIILMV
VLIAIIMALVMSQMGPRFGKFQTLMDKINRIAKENLRGVRVVKSFVQEREQYAKFKETSNELLDLNMFIGYGFSMMQPAL
MLVSYLAVFVSLLLVSKMVKTDPTVIGSIASFMTYMMQIMFSIIMVGFMGMQASRAFISIGRLKEVLETEPAMTFATEDV
EDLNGDIVFDHVSFSYPNEEDAMLKDISFSIKSGQMVGVVGATGAGKSTLAQLIPRLFDPQEGTITIGGKDLKTLSQQTL
RETVSIVLQKAILFSGTIADNLRQGNLTADLQAMESAARIAQAQEFIDRMDLAYESEVEERGNNFSGGQKQRMSIARGVI
SNPKVLVLDDSTSALDAKSEKLVQEALNKDLKDTTTIIIAQKISSVVKADTILVLDEGKLIGQGTHAELVANNAVYREIY
DTQKGKEED

Nucleotide


Download         Length: 1710 bp        

>NTDB_id=529276 K7G42_RS10705 WP_004235128.1 2035981..2037690(-) (rcrP) [Streptococcus parauberis strain KRS02083]
ATGCTTAAAAATGCCATCATGCGTTATAAATGGTATGCCCTAGGTTCTGTCTTAATGATCATAGCAGTTGTAGCAAGTGC
ATTGTTACAACCTCATTATCTGAAAGATGTGCTAAGTGCAGTCATGAAAAATGACACAGATAAAATTACAGAAGTTGGAC
AGTTATTATTGATTATTGCAGGAGTTGGTTTAATTGCCGGTACTGTCAATACCATTTTAGCAGCTAAGATAGCTCAAGGT
GTATCAGCTGATATCCGTGAGAAGGTATTTAGAAAAATCCAAAGTTTTTCATATGCTAATGTTGAGGAATTTAATGCTGG
TAATTTAGTTGTTCGTATGACCAACGATGTTAACCAAATCCAAAACTTGGTGATGATGATTTTCCAAGTCTTGCTCCGTT
TACCGATTTTATTTATAGGTGCCTTTATTATGGCGGTTAACACTTTACCAAAACTATGGTGGGTTATTATCCTGATGGTT
GTATTAATTGCTATTATTATGGCCCTTGTTATGAGTCAAATGGGCCCACGTTTTGGGAAGTTCCAAACCTTGATGGATAA
AATTAATCGTATTGCTAAAGAGAATCTACGTGGTGTTCGTGTCGTTAAATCGTTCGTTCAAGAAAGAGAACAATATGCTA
AATTCAAAGAGACATCAAATGAACTATTAGATCTTAATATGTTTATTGGGTACGGTTTTTCAATGATGCAACCAGCTTTA
ATGCTAGTTTCGTATTTAGCTGTTTTTGTATCACTCTTATTAGTTTCCAAGATGGTAAAAACAGATCCAACAGTTATAGG
TAGTATTGCTTCCTTCATGACTTATATGATGCAAATCATGTTTTCAATTATTATGGTTGGATTCATGGGGATGCAAGCTA
GTCGTGCTTTTATTTCAATTGGTCGTCTGAAAGAAGTTTTAGAGACAGAACCTGCAATGACTTTTGCTACTGAAGACGTT
GAAGATTTAAATGGCGATATTGTTTTTGATCATGTATCTTTCTCATATCCAAATGAAGAAGATGCTATGTTAAAAGATAT
TTCCTTCTCTATTAAATCTGGGCAAATGGTTGGTGTCGTTGGCGCAACAGGTGCCGGAAAATCAACCTTGGCTCAATTAA
TTCCTCGTTTATTTGACCCACAAGAGGGTACAATCACAATTGGTGGTAAAGATTTAAAAACACTCAGCCAACAAACACTC
CGCGAAACAGTTTCAATTGTTTTGCAAAAAGCCATTCTCTTTTCGGGGACTATTGCAGATAACCTTCGCCAAGGAAATTT
AACAGCTGATTTACAAGCTATGGAAAGTGCTGCTAGAATCGCGCAAGCTCAAGAATTTATTGACCGAATGGATTTAGCCT
ACGAAAGTGAAGTTGAAGAACGTGGAAATAATTTCTCTGGTGGTCAGAAACAACGGATGTCCATTGCTCGTGGGGTTATC
AGTAATCCCAAGGTCTTAGTCTTGGACGATTCAACGTCAGCCTTAGATGCTAAGTCAGAGAAACTAGTCCAAGAAGCTTT
AAACAAGGACTTGAAAGATACAACAACAATTATCATTGCACAAAAGATTTCGTCAGTGGTTAAAGCCGATACTATCTTAG
TTTTAGATGAAGGTAAGTTAATTGGTCAAGGAACCCATGCTGAATTAGTAGCAAATAATGCAGTCTACCGTGAAATTTAT
GATACACAGAAAGGTAAGGAGGAAGACTAA

Domains

Predicted by InterProScan.

ABC transporter transmembrane region (ABC_membrane)

(16-282)

ABC transporter (ABC_tran)

(344-493)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  rcrP Streptococcus mutans UA159

35.017

100

0.366