Detailed information NTG0528117

Bioinformatically predicted

Overview

• Name: pilD
• Type: Machinery gene
• Locus tag: K7H19_RS01430
• Genome accession: NZ_CP082323
• Coordinates: 257266..258333 (-)
• Length: 355 a.a.
• NCBI ID: WP_011227821.1
• Uniprot ID: Q5SLM4
• Organism: Thermus thermophilus strain N-1
• Function: assembly of type IV pilus (predicted from homology) DNA binding and uptake

Genomic Context

Location: 252266..263333

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
K7H19_RS01405 (K7H19_01405)	recF	253286..254317 (+)	1032	WP_011227816.1	DNA replication/repair protein RecF	Machinery gene
K7H19_RS01410 (K7H19_01410)	-	254302..255060 (+)	759	WP_165446277.1	DUF721 domain-containing protein	-
K7H19_RS01415 (K7H19_01415)	-	255061..255837 (+)	777	WP_011227818.1	C40 family peptidase	-
K7H19_RS01420 (K7H19_01420)	-	255791..256711 (-)	921	WP_011227819.1	nitroreductase family protein	-
K7H19_RS01425 (K7H19_01425)	-	256725..257228 (-)	504	WP_011227820.1	DUF2939 domain-containing protein	-
K7H19_RS01430 (K7H19_01430)	pilD	257266..258333 (-)	1068	WP_011227821.1	A24 family peptidase	Machinery gene
K7H19_RS01435 (K7H19_01435)	-	258400..259932 (+)	1533	WP_011174078.1	thermostable carboxypeptidase 1	-
K7H19_RS01440 (K7H19_01440)	groL	259996..261627 (-)	1632	WP_011174077.1	chaperonin GroEL	-
K7H19_RS01445 (K7H19_01445)	groES	261640..261945 (-)	306	WP_011174076.1	co-chaperone GroES	-
K7H19_RS01450 (K7H19_01450)	-	262042..262689 (-)	648	WP_224065233.1	transposase	-
K7H19_RS11745	-	262631..262816 (+)	186	WP_223966770.1	hypothetical protein	-

Sequence

Protein

• Length: 355 a.a.
• Molecular weight: 37888.18 Da
• Isoelectric Point: 8.1123

>NTDB_id=528117 K7H19_RS01430 WP_011227821.1 257266..258333(-) (pilD) [Thermus thermophilus strain N-1]
MWPLFALLLGLAVGSFLNVVVHRLPRGESVAYPPSRCPQCGHRLGPWDLVPVLSYLALKGRCRYCARPISPRYPLVEALT
GGLFLLASLFYPPGVEALLVFLFLAFLVALAFIDVDTFELPDPLTYGLLFLGLLASWALAFPLPFRESLDGSLMAAGGLA
LVAGYGNLFLRRFREARAEVPVGPHQVHMAALFGALLGPGVGMALAFLAWALSARTGRAVALPDRLTLPLLPLAFLLAPA
LGLDFLESLKGSLLAAGGLALAGGLYWAFRPLPEEGEEEPVAMGYGDVKLLGALGAWLGPYAFLALFLGVFAGALLGLLL
RQRKLPFGPYLALGGVVAFFFGEALWGAYLRLLGV

Nucleotide

• Length: 1068 bp

>NTDB_id=528117 K7H19_RS01430 WP_011227821.1 257266..258333(-) (pilD) [Thermus thermophilus strain N-1]
ATGTGGCCCCTCTTCGCCCTGCTCCTCGGCCTCGCGGTGGGTTCCTTTCTCAACGTGGTGGTCCACCGCCTGCCCCGGGG
GGAGTCCGTCGCCTACCCCCCGTCCCGCTGCCCCCAGTGCGGCCACCGCCTGGGGCCTTGGGACCTGGTCCCCGTCCTCT
CCTACCTCGCCCTAAAGGGGCGGTGCCGCTACTGCGCCCGTCCCATCTCCCCCCGCTACCCCCTGGTGGAGGCCCTCACG
GGGGGGCTTTTCCTCCTCGCAAGCCTCTTCTACCCCCCTGGGGTGGAGGCCCTCTTGGTCTTCCTCTTCCTCGCCTTTCT
CGTGGCCCTCGCCTTCATTGACGTGGACACCTTTGAGCTTCCCGATCCCCTCACCTACGGCCTCCTCTTCCTTGGGCTTT
TGGCCTCCTGGGCGCTGGCCTTCCCCCTCCCCTTTAGGGAGAGCCTGGACGGAAGCCTCATGGCCGCCGGGGGGCTCGCC
CTGGTGGCGGGGTACGGGAACCTCTTTCTGCGGCGCTTTAGGGAGGCCAGGGCCGAGGTCCCCGTGGGGCCCCACCAGGT
CCACATGGCGGCCCTCTTTGGGGCGCTCTTGGGCCCAGGGGTGGGGATGGCCCTCGCCTTCCTCGCTTGGGCCCTCTCCG
CCCGCACGGGGCGGGCGGTGGCCCTCCCCGACCGGCTCACCCTGCCCCTTTTGCCCCTCGCCTTCCTCCTTGCCCCCGCC
CTAGGCCTGGACTTCCTGGAAAGCCTTAAGGGAAGCCTCCTCGCTGCCGGGGGGCTCGCCCTCGCCGGGGGGCTTTACTG
GGCCTTCCGGCCCCTTCCCGAGGAGGGCGAGGAGGAGCCCGTGGCCATGGGCTACGGGGACGTGAAGCTTCTGGGGGCCC
TCGGGGCCTGGCTCGGCCCTTACGCCTTCCTCGCCCTCTTCCTCGGGGTCTTCGCCGGGGCGCTTTTGGGCCTTCTCCTT
AGGCAAAGGAAGCTCCCCTTCGGCCCCTACCTCGCCCTCGGGGGGGTGGTGGCCTTCTTCTTCGGGGAGGCCCTCTGGGG
GGCGTACCTGCGCCTTCTGGGCGTTTGA

Domains

Predicted by InterProScan.

• Bacterial Peptidase A24 N-terminal domain (A24_N_bact) (8-88)

• Type IV leader peptidase family (Peptidase_A24) (207-318)

3D structure

• AlphaFold DB: Q5SLM4

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
pilD	Deinococcus radiodurans R1 = ATCC 13939 = DSM 20539	44.909	100	0.485