Detailed information    

insolico Bioinformatically predicted

Overview

Name   mutS/mutS2   Type   Machinery gene
Locus tag   BAJP3144_RS14335 Genome accession   NZ_CP082283
Coordinates   2910101..2912458 (-) Length   785 a.a.
NCBI ID   WP_065181013.1    Uniprot ID   -
Organism   Bacillus amyloliquefaciens strain JP3144     
Function   homologous recombination (predicted from homology)   
Homologous recombination

Genomic Context

Location: 2905101..2917458
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  BAJP3144_RS14310 (BAJP3144_14310) - 2905607..2906386 (-) 780 WP_014418582.1 enoyl-CoA hydratase -
  BAJP3144_RS14315 (BAJP3144_14315) - 2906400..2906984 (-) 585 WP_007408119.1 TetR/AcrR family transcriptional regulator -
  BAJP3144_RS14320 (BAJP3144_14320) - 2907073..2908761 (-) 1689 WP_014721631.1 AMP-binding protein -
  BAJP3144_RS14325 (BAJP3144_14325) - 2908867..2909541 (+) 675 WP_021494412.1 DUF2711 family protein -
  BAJP3144_RS14330 (BAJP3144_14330) - 2909680..2910084 (-) 405 WP_003152541.1 DUF350 domain-containing protein -
  BAJP3144_RS14335 (BAJP3144_14335) mutS/mutS2 2910101..2912458 (-) 2358 WP_065181013.1 endonuclease MutS2 Machinery gene
  BAJP3144_RS14340 (BAJP3144_14340) polX 2912479..2914191 (-) 1713 WP_007408115.1 DNA polymerase/3'-5' exonuclease PolX -
  BAJP3144_RS14345 (BAJP3144_14345) - 2914297..2914830 (-) 534 WP_014418586.1 CvpA family protein -
  BAJP3144_RS14350 (BAJP3144_14350) zapA 2914838..2915095 (-) 258 WP_007408114.1 cell division protein ZapA -
  BAJP3144_RS14355 (BAJP3144_14355) rnhC 2915229..2916170 (+) 942 WP_053573141.1 ribonuclease HIII -

Sequence

Protein


Download         Length: 785 a.a.        Molecular weight: 87300.64 Da        Isoelectric Point: 6.3493

>NTDB_id=528069 BAJP3144_RS14335 WP_065181013.1 2910101..2912458(-) (mutS/mutS2) [Bacillus amyloliquefaciens strain JP3144]
MQQKVLSSLEFHKVKEQITAHAVSSLGREKLLQLKPLTDLSDIQKQLDEVEEASAVMRLRGHAPFGGLTDIRSALRRAEI
GSVLTPAEFTELSGLLYAVKQMKHFISQMTEDGVGIPLIQAHAEELITLGDLEREINSCIDDHGEVLDHASPALRGIRTQ
LRTLESRVRDRLESMLRSSSASKMLSDTIVTIRNDRFVIPVKQEYRSSYGGIVHDTSSSGATLFIEPQAIVDMNNSLQQA
KVKEKQEIERILRMLTEHTAEHTQEIAQNVEVLQTLDFIFAKARYAKAMKATKPLMNGDGFIRLKKARHPLLPQDQVVAN
DIELGGDYSTIVITGPNTGGKTVTLKTLGLLTIMAQAGLHIPADEGSEAAVFDNVFADIGDEQSIEQSLSTFSSHMVNIV
NILKDVSENSLVLFDELGAGTDPQEGAALAMSILDEVHRTNARVLATTHYPELKAYGYNRQGVMNASVEFDIETLSPTYK
LLIGVPGRSNAFEISRRLGLPEHIIGQAKSEMTAEHNEVDLMIASLEKSKKRADEELSETESIRKEAEKLHKELQQQIIE
LNAQKDKMMEEAEQKAAEKLEAAANEAEQIIRELRSIKQEHRSFKEHELIDAKKRLGDAMPAFEKSKQPERKTEKKRELK
PGDEVKVLTFGQKGALLEKTGEKEWNVQIGILKMKVKEKDLEFLKSAPEPKKEKAITAVKGKDYHVSLELDLRGERYENA
LSRVEKYLDDAVLAGYPRVSIIHGKGTGALRKGVQDLLKNHRSVKSSRFGEAGEGGSGVTIVELK

Nucleotide


Download         Length: 2358 bp        

>NTDB_id=528069 BAJP3144_RS14335 WP_065181013.1 2910101..2912458(-) (mutS/mutS2) [Bacillus amyloliquefaciens strain JP3144]
GTGCAGCAAAAAGTGTTATCATCACTTGAATTTCATAAAGTAAAAGAACAGATTACCGCACATGCCGTCTCATCGCTCGG
CCGGGAGAAGCTTCTGCAGCTGAAACCTTTGACGGATCTCTCAGACATCCAAAAACAGCTGGATGAAGTTGAAGAAGCAT
CCGCGGTCATGCGCTTGAGAGGCCATGCTCCGTTCGGCGGACTGACCGACATAAGATCCGCTTTACGGCGGGCGGAAATC
GGCAGTGTGCTGACACCGGCGGAATTCACCGAATTGTCCGGGCTGCTGTATGCCGTTAAACAAATGAAGCATTTTATCAG
CCAAATGACAGAAGACGGCGTCGGCATTCCGCTGATACAGGCCCATGCAGAAGAGCTGATTACATTAGGCGATTTGGAAA
GGGAGATTAACTCCTGCATTGATGACCATGGTGAAGTGCTTGATCATGCGTCACCCGCTTTAAGGGGAATCCGCACGCAG
CTCAGGACGCTTGAATCAAGAGTCAGAGACCGGCTTGAATCGATGCTGCGTTCATCTTCCGCTTCTAAAATGCTGTCTGA
CACCATCGTTACGATTCGGAATGACCGCTTTGTCATCCCGGTCAAACAGGAATACAGATCAAGCTACGGCGGAATTGTCC
ACGATACATCTTCATCCGGTGCGACACTGTTTATTGAACCGCAGGCGATCGTAGATATGAACAACTCGCTTCAGCAGGCG
AAAGTAAAAGAAAAACAGGAAATCGAACGGATTCTTCGAATGCTGACGGAGCATACGGCTGAACACACACAAGAAATCGC
TCAAAATGTGGAAGTGCTGCAGACACTGGATTTCATTTTCGCCAAAGCGAGATACGCAAAAGCGATGAAGGCGACAAAAC
CACTTATGAACGGAGACGGCTTTATCCGGCTGAAAAAAGCGCGCCATCCGCTGCTGCCCCAAGATCAAGTCGTGGCCAAC
GATATTGAACTGGGCGGAGATTATTCAACGATCGTTATCACGGGACCGAATACGGGCGGTAAAACCGTTACGTTAAAAAC
ACTCGGGCTGCTGACGATAATGGCGCAGGCAGGATTGCACATACCGGCTGATGAGGGATCGGAAGCAGCCGTATTTGACA
ATGTGTTTGCCGATATCGGCGATGAACAGTCGATCGAACAAAGTCTGAGTACGTTCTCATCCCACATGGTCAATATCGTC
AATATTTTAAAAGACGTGTCTGAAAACAGTCTTGTGCTGTTTGATGAACTCGGTGCCGGAACAGATCCGCAGGAAGGGGC
GGCGCTTGCCATGAGCATCCTTGACGAAGTTCACCGGACAAACGCCAGAGTGCTTGCGACAACCCATTATCCGGAACTGA
AAGCATACGGATATAACAGACAAGGCGTCATGAATGCCAGCGTTGAATTTGACATTGAAACGCTTTCGCCTACCTATAAG
CTTCTGATCGGAGTGCCGGGCCGAAGCAACGCATTTGAAATCTCAAGACGCCTTGGGCTTCCGGAGCATATCATCGGCCA
GGCGAAGTCAGAAATGACCGCCGAACATAACGAAGTCGATCTGATGATCGCATCGCTTGAAAAAAGCAAAAAAAGAGCGG
ATGAAGAGCTTTCTGAAACCGAATCAATCAGAAAAGAAGCAGAAAAACTGCACAAAGAGCTTCAGCAGCAGATCATTGAG
CTGAACGCCCAAAAAGATAAAATGATGGAAGAAGCCGAGCAGAAAGCTGCGGAAAAACTGGAAGCCGCCGCAAATGAAGC
CGAACAGATTATCCGCGAACTCCGGTCCATCAAGCAAGAACACAGATCCTTTAAGGAACACGAGCTGATTGACGCCAAAA
AACGTCTCGGAGACGCGATGCCGGCTTTTGAAAAATCAAAGCAGCCGGAAAGAAAAACAGAGAAAAAACGCGAGCTCAAG
CCGGGCGACGAAGTAAAGGTGCTCACATTCGGACAAAAAGGGGCGCTGCTTGAAAAAACCGGCGAGAAAGAATGGAACGT
CCAAATCGGCATCCTTAAAATGAAGGTGAAGGAAAAAGATCTTGAGTTTCTCAAATCGGCTCCTGAACCGAAAAAAGAAA
AAGCAATCACCGCCGTAAAAGGGAAGGATTATCACGTATCCCTTGAACTTGACCTCAGGGGAGAGCGTTACGAAAACGCC
CTCAGCCGCGTCGAAAAATATTTAGATGACGCGGTGCTTGCCGGCTATCCGAGAGTGTCCATCATTCACGGAAAAGGCAC
GGGCGCCCTCCGAAAAGGGGTGCAGGATCTTCTGAAAAACCACCGCAGCGTGAAAAGCTCGCGGTTCGGGGAAGCGGGAG
AAGGAGGATCAGGCGTAACGATTGTCGAACTAAAATAA

Domains

Predicted by InterProScan.

MutS2 and Smr-associated SH3 domain (MSSS)

(641-681)

MutS domain V (MutS_V)

(331-512)

Smr domain (Smr)

(710-785)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  mutS/mutS2 Bacillus subtilis subsp. subtilis str. 168

87.516

100

0.875