Detailed information NTG0527759

Bioinformatically predicted

Overview

• Name: rarA
• Type: Machinery gene
• Locus tag: K7B13_RS12725
• Genome accession: NZ_CP082278
• Coordinates: 2509684..2510952 (+)
• Length: 422 a.a.
• NCBI ID: WP_065981963.1
• Uniprot ID: -
• Organism: Bacillus amyloliquefaciens strain 35M
• Function: homologous recombination (predicted from homology) Homologous recombination

Genomic Context

Location: 2504684..2515952

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
K7B13_RS12705 (K7B13_12705)	-	2506055..2506675 (-)	621	WP_088030693.1	lipopolysaccharide assembly protein LapB	-
K7B13_RS12710 (K7B13_12710)	mnmA	2506763..2507878 (-)	1116	WP_065981961.1	tRNA 2-thiouridine(34) synthase MnmA	-
K7B13_RS12715 (K7B13_12715)	-	2507915..2509054 (-)	1140	WP_065981962.1	cysteine desulfurase family protein	-
K7B13_RS12720 (K7B13_12720)	cymR	2509073..2509489 (-)	417	WP_013353022.1	cysteine metabolism transcriptional regulator CymR	-
K7B13_RS12725 (K7B13_12725)	rarA	2509684..2510952 (+)	1269	WP_065981963.1	replication-associated recombination protein A	Machinery gene
K7B13_RS12730 (K7B13_12730)	-	2511068..2511832 (-)	765	WP_115997691.1	ThiF family adenylyltransferase	-
K7B13_RS12740 (K7B13_12740)	aspS	2512157..2513935 (-)	1779	WP_065981964.1	aspartate--tRNA ligase	-
K7B13_RS12745 (K7B13_12745)	hisS	2513950..2515224 (-)	1275	WP_065981965.1	histidine--tRNA ligase	-
K7B13_RS12750 (K7B13_12750)	-	2515604..2515774 (-)	171	WP_161957662.1	YrzK family protein	-

Sequence

Protein

• Length: 422 a.a.
• Molecular weight: 46645.52 Da
• Isoelectric Point: 8.2451

>NTDB_id=527759 K7B13_RS12725 WP_065981963.1 2509684..2510952(+) (rarA) [Bacillus amyloliquefaciens strain 35M]
MKPLAYRMRPANIEDIIGQEHLVKEDKIIGRMVRAKHLSSMILYGPPGIGKTSIATAIAGSTSIAFRKLNAVIHNKKDME
IVVQEAKMSGQVILILDEVHRLDKGKQDFLLPYLENGMIILIGATTANPYHAINPAIRSRTQIFELEPLTPDLIKQALRR
ALTDEHRGLGSYSVSVDDDAMDHFAQGCGGDVRSALNALELAVLSTKESSDGTIRITRETAEECLQKKSYTHDKDGDAHY
DVLSAFQKSIRGSDANAALHYLARLIEAGDLESISRRLLVIAYEDIGLASPQAGPRVLGAIQTAERIGFPEARIPLANAV
IELCLSPKSNSAISAVDEALKDIRSGKIGDVPKHLKDAHYKGAQELGRGIGYQYPHDFENGWVEQQYLPDPLKNKQYYKP
KQTGKFEAAIKQVYEKLMKQKK

Nucleotide

• Length: 1269 bp

>NTDB_id=527759 K7B13_RS12725 WP_065981963.1 2509684..2510952(+) (rarA) [Bacillus amyloliquefaciens strain 35M]
ATGAAACCATTGGCGTATCGGATGCGGCCTGCCAATATCGAAGACATTATCGGCCAGGAACATTTGGTCAAAGAAGATAA
AATCATCGGCAGAATGGTGCGCGCAAAGCACCTATCATCCATGATCCTGTACGGACCGCCGGGCATCGGAAAAACGTCCA
TCGCCACAGCGATCGCAGGATCGACAAGCATCGCATTCAGAAAATTGAATGCCGTCATTCATAATAAAAAAGACATGGAA
ATTGTCGTACAGGAAGCGAAAATGTCAGGCCAGGTCATCTTAATACTTGATGAAGTGCACAGGCTTGATAAGGGGAAGCA
GGATTTTCTGCTGCCCTATTTAGAAAACGGCATGATTATTTTAATCGGCGCGACCACCGCCAATCCTTATCATGCCATTA
ACCCGGCCATCAGAAGCCGTACCCAGATATTCGAACTCGAACCGTTAACACCGGATCTGATCAAGCAGGCATTGAGAAGA
GCGCTCACAGATGAACACCGGGGACTCGGTTCCTACAGTGTTTCGGTGGACGACGACGCGATGGATCATTTCGCGCAAGG
GTGCGGAGGGGACGTCCGCTCCGCTTTGAATGCACTGGAGCTTGCCGTGCTTTCCACAAAGGAATCAAGTGACGGCACGA
TCCGCATTACGCGGGAAACAGCGGAAGAATGTCTGCAGAAAAAAAGCTATACCCATGATAAAGACGGAGATGCGCATTAT
GACGTCTTATCGGCATTCCAAAAATCAATCCGCGGCTCAGACGCAAACGCCGCACTGCATTATTTGGCCCGACTGATCGA
AGCCGGCGATCTTGAAAGCATTTCCAGAAGGCTTCTCGTGATCGCCTATGAAGATATCGGCCTTGCAAGCCCGCAGGCAG
GCCCCCGGGTGCTGGGCGCGATTCAGACCGCAGAGCGGATCGGCTTTCCCGAGGCGAGAATTCCGCTGGCGAATGCGGTA
ATCGAATTATGCCTCTCGCCAAAATCAAACTCCGCCATCTCAGCCGTTGATGAAGCGCTCAAAGATATCAGATCGGGTAA
AATCGGCGATGTGCCGAAACATTTAAAAGACGCTCACTATAAAGGAGCCCAAGAGCTCGGTCGCGGAATCGGCTATCAAT
ATCCTCACGATTTCGAGAACGGATGGGTCGAACAGCAATATTTGCCTGATCCGTTAAAAAACAAACAATACTATAAACCG
AAACAAACGGGGAAATTTGAAGCCGCCATAAAACAAGTGTATGAAAAACTGATGAAACAGAAGAAATAA

Domains

Predicted by InterProScan.

• MgsA AAA+ ATPase C terminal (MgsA_C) (252-417)

• Holliday junction DNA helicase RuvB P-loop domain (RuvB_N) (8-125)

• AAA C-terminal domain (AAA_assoc_2) (172-251)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
rarA	Bacillus subtilis subsp. subtilis str. 168	91.211	99.763	0.91