Detailed information    

insolico Bioinformatically predicted

Overview

Name   mutS/mutS2   Type   Machinery gene
Locus tag   K6969_RS00585 Genome accession   NZ_CP082205
Coordinates   101538..103871 (+) Length   777 a.a.
NCBI ID   WP_029173727.1    Uniprot ID   -
Organism   Streptococcus suis strain AKJ18     
Function   homologous recombination (predicted from homology)   
Homologous recombination

Genomic Context

Location: 96538..108871
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  K6969_RS00565 (K6969_00550) treP 97579..99573 (-) 1995 WP_171943156.1 PTS system trehalose-specific EIIBC component -
  K6969_RS00570 (K6969_00555) treR 99807..100520 (+) 714 WP_029173724.1 trehalose operon repressor Regulator
  K6969_RS00575 (K6969_00560) - 100578..100889 (+) 312 WP_002935948.1 hypothetical protein -
  K6969_RS00580 (K6969_00565) - 100886..101434 (+) 549 WP_029173726.1 CvpA family protein -
  K6969_RS00585 (K6969_00570) mutS/mutS2 101538..103871 (+) 2334 WP_029173727.1 endonuclease MutS2 Machinery gene
  K6969_RS00590 (K6969_00575) - 103895..104548 (+) 654 WP_029173728.1 GNAT family N-acetyltransferase -
  K6969_RS00595 (K6969_00580) tnpA 104707..105180 (+) 474 WP_024378560.1 IS200/IS605 family transposase -
  K6969_RS00600 (K6969_00585) - 105402..105779 (+) 378 WP_044760212.1 MerR family transcriptional regulator -
  K6969_RS00605 (K6969_00590) - 105782..106636 (+) 855 WP_029173435.1 aldo/keto reductase -
  K6969_RS00610 (K6969_00595) trxA 106854..107168 (+) 315 WP_044760211.1 thioredoxin -
  K6969_RS12325 - 107262..107312 (-) 51 WP_353735889.1 hypothetical protein -
  K6969_RS00615 (K6969_00600) - 107302..108831 (+) 1530 WP_044760210.1 AMP-binding protein -

Sequence

Protein


Download         Length: 777 a.a.        Molecular weight: 87685.33 Da        Isoelectric Point: 6.4820

>NTDB_id=527306 K6969_RS00585 WP_029173727.1 101538..103871(+) (mutS/mutS2) [Streptococcus suis strain AKJ18]
MNNKIIETLEFHKVRQKIEPYLLTEQGFEELRQLEPMVEVHRIQQAFDELTDIAQIFVENPYFSLAATSDIGPAMRRLEL
DTDLNISELLAVKRVLEVSKTLLDFYGNLENVSLSQLDKLFEKIELFPHLQGSLQSINDAGFVEDFASEKLARIRRKIRE
AEDQVRQVMQDILKTKGDMLSDSILASRNGRNVLPVKNTYRNKIAGVVHDISASGSTVYIEPRAVVTLNEEISHLRAEER
HELNRILQELSDMLRPHSGVIRNNAWLIGHIDFVRAKHLFARDHQAVVPKLSEKQDIALLNVRHPLIAEPVPNDLYFGSQ
LTAIVITGPNTGGKTIMLKTLGLTHLMAQSGLPILADKGSRVAIFKEIFADIGDEQSIEQSLSTFSSHMTHTVQILAEAD
QDSLILFDELGAGTDPQEGASLAMAILDDLRLRGIKTMATTHYPELKAYGIETSGIENASMEFDSNSLRPTYKFMQGVPG
RSNAFEIARRLGLSDIIIQSAQSWTDTDSDVNRIIEKLESQTVESRQRLDKIRDVEQENYKMNRALRKLYDELNRERENE
LNKARLEAKEIVDMALSESEDILKNLHAAASLKPHQIIEAKAELKKLAPEVVDLSKNKVLKKAKIQREAKVGDDIIVTAY
GQRGTLTNQLKDGRWEAQVGLIKMTLTKEEFELVKVEKAEQPKKRQVHTVKRANVRGPKARLDLRGKRYEEAMMELDEFI
DQALLNNLAQVDIVHGIGTGVIREGVTKYLRRNKQVKEFGYAPQNAGGSGCTIVTFK

Nucleotide


Download         Length: 2334 bp        

>NTDB_id=527306 K6969_RS00585 WP_029173727.1 101538..103871(+) (mutS/mutS2) [Streptococcus suis strain AKJ18]
ATGAATAATAAAATTATTGAAACCCTTGAATTTCACAAGGTAAGACAAAAAATTGAGCCCTATCTCTTGACGGAACAGGG
CTTCGAAGAATTACGACAGTTGGAGCCCATGGTGGAAGTCCATCGTATCCAACAGGCCTTTGACGAGTTGACAGACATAG
CGCAGATTTTTGTGGAAAATCCCTATTTCAGTCTGGCTGCTACTAGTGACATCGGTCCAGCCATGCGTCGTTTGGAATTG
GATACAGACCTCAATATCTCAGAATTATTGGCAGTCAAGCGAGTCTTGGAAGTGTCCAAAACTCTCTTGGATTTTTATGG
AAATCTGGAAAATGTCAGTCTTAGCCAGCTGGATAAACTCTTTGAGAAGATTGAGCTTTTTCCACATTTACAGGGCTCCC
TCCAGTCCATCAATGATGCTGGTTTTGTAGAGGATTTTGCCTCAGAAAAGCTGGCTCGTATCCGCCGGAAAATCCGTGAA
GCTGAAGACCAAGTTCGTCAGGTCATGCAGGATATTTTGAAGACCAAGGGGGACATGCTGTCCGATAGCATTTTGGCAAG
CCGTAATGGACGCAATGTCCTTCCTGTTAAAAATACCTATCGCAATAAGATTGCTGGGGTTGTCCATGACATTTCAGCTT
CGGGTTCGACCGTTTATATTGAGCCGCGGGCAGTGGTGACTTTGAATGAAGAAATCAGTCACCTACGTGCAGAAGAACGC
CATGAGCTCAACCGTATCTTGCAGGAATTGTCGGATATGCTCCGTCCGCATAGTGGTGTGATTCGTAACAACGCCTGGCT
TATCGGACATATTGATTTTGTTCGTGCTAAGCATCTCTTTGCGCGTGATCATCAAGCAGTTGTACCCAAACTATCTGAGA
AGCAGGATATTGCCCTTCTCAACGTTCGCCATCCGCTGATTGCTGAGCCCGTTCCAAACGACCTCTATTTCGGTAGTCAG
TTGACGGCTATCGTGATAACGGGTCCCAACACGGGTGGCAAGACTATTATGCTCAAGACCTTGGGATTGACCCATCTCAT
GGCTCAGTCTGGTTTGCCTATTTTGGCTGATAAGGGCAGTCGGGTAGCTATCTTCAAAGAAATTTTTGCGGACATTGGGG
ATGAACAGTCGATTGAGCAGAGTTTATCCACCTTCTCCAGTCACATGACTCACACGGTACAGATTTTGGCGGAGGCGGAT
CAAGATTCTCTGATTTTATTTGATGAGTTGGGGGCAGGTACCGATCCACAGGAGGGCGCGTCGCTGGCCATGGCTATTTT
AGACGACCTTCGCCTACGGGGCATCAAGACCATGGCAACTACTCACTATCCGGAGCTCAAGGCTTACGGGATAGAAACCT
CTGGTATTGAAAATGCCAGCATGGAGTTTGATAGCAATAGCCTGCGTCCGACCTATAAGTTTATGCAGGGTGTTCCTGGT
CGCTCCAATGCCTTTGAAATTGCCCGCCGTCTTGGTCTATCTGATATTATTATCCAGTCAGCCCAATCTTGGACGGATAC
AGATAGCGATGTGAACCGCATTATCGAGAAATTGGAAAGTCAGACGGTTGAAAGTCGTCAGCGTCTGGATAAGATTCGTG
ATGTGGAGCAAGAAAATTACAAGATGAACCGAGCCCTCCGCAAGCTCTATGACGAGCTCAATCGAGAGAGGGAAAATGAG
CTCAACAAGGCACGCTTGGAAGCCAAGGAAATTGTAGATATGGCATTGTCAGAAAGCGAGGATATTCTCAAAAATCTCCA
TGCTGCAGCTAGTCTTAAGCCCCACCAGATTATCGAAGCCAAGGCAGAGCTGAAAAAGTTGGCGCCTGAAGTGGTGGATC
TGTCTAAAAACAAGGTTCTGAAGAAAGCTAAAATTCAGAGGGAAGCCAAGGTGGGCGATGACATTATCGTTACAGCTTAT
GGACAACGTGGGACCTTGACCAATCAGCTCAAGGACGGGCGTTGGGAAGCTCAGGTTGGCTTGATTAAGATGACCTTGAC
CAAGGAGGAGTTTGAGCTTGTTAAGGTGGAAAAGGCAGAGCAGCCTAAGAAACGTCAGGTTCACACGGTCAAACGCGCCA
ATGTACGAGGACCAAAAGCCCGCTTAGATCTCCGTGGCAAACGCTACGAAGAGGCTATGATGGAGCTGGATGAATTTATT
GACCAGGCCCTGCTCAATAACCTAGCACAAGTCGATATTGTCCACGGTATCGGTACAGGGGTTATCCGAGAAGGTGTGAC
CAAGTACCTCCGTCGCAACAAGCAGGTCAAGGAGTTCGGCTACGCTCCACAAAATGCAGGTGGTTCAGGCTGTACTATTG
TGACGTTTAAATAG

Domains

Predicted by InterProScan.

MutS domain V (MutS_V)

(324-504)

MutS2 and Smr-associated SH3 domain (MSSS)

(631-669)

Smr domain (Smr)

(702-777)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  mutS/mutS2 Bacillus subtilis subsp. subtilis str. 168

39.773

100

0.405