Detailed information    

insolico Bioinformatically predicted

Overview

Name   amiE   Type   Regulator
Locus tag   K6974_RS03355 Genome accession   NZ_CP082204
Coordinates   635811..636545 (+) Length   244 a.a.
NCBI ID   WP_002943067.1    Uniprot ID   A0A0H3MU26
Organism   Streptococcus suis strain FJSM5     
Function   internalize XIP (predicted from homology)   
Competence regulation

Genomic Context

Location: 630811..641545
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  K6974_RS03330 (K6974_03300) - 631310..631618 (-) 309 WP_222336810.1 DUF1827 family protein -
  K6974_RS03335 (K6974_03305) - 631673..632134 (-) 462 WP_002938708.1 NUDIX hydrolase -
  K6974_RS03340 (K6974_03310) clpE 632320..634548 (-) 2229 WP_032510584.1 ATP-dependent Clp protease ATP-binding subunit Regulator
  K6974_RS03345 (K6974_03315) - 634772..635002 (+) 231 WP_002938704.1 DUF1797 family protein -
  K6974_RS03350 (K6974_03320) - 635129..635818 (+) 690 WP_002938702.1 amino acid ABC transporter permease -
  K6974_RS03355 (K6974_03325) amiE 635811..636545 (+) 735 WP_002943067.1 amino acid ABC transporter ATP-binding protein Regulator
  K6974_RS03360 (K6974_03330) - 636675..637523 (+) 849 WP_014735556.1 bifunctional methylenetetrahydrofolate dehydrogenase/methenyltetrahydrofolate cyclohydrolase -
  K6974_RS03365 (K6974_03335) - 637853..639025 (+) 1173 WP_099778636.1 IS110 family transposase -
  K6974_RS03370 (K6974_03340) lysS 639962..641452 (-) 1491 WP_024380363.1 lysine--tRNA ligase -

Sequence

Protein


Download         Length: 244 a.a.        Molecular weight: 26881.11 Da        Isoelectric Point: 4.7252

>NTDB_id=527236 K6974_RS03355 WP_002943067.1 635811..636545(+) (amiE) [Streptococcus suis strain FJSM5]
MSNAIISIKDLHKYFGKNEVLKGIDLDIQQGQVVVIIGPSGSGKSTFLRTMNLLEVPTKGTVTFEGVDITDKSNDIFKMR
EKMGMVFQQFNLFPNMTVLDNITLSPIKTKGIAKDEAEKKAKELLEKVGLPDKANAYPQSLSGGQQQRIAIARGLAMDPD
VLLFDEPTSALDPEMVGEVLAVMQDLAKSGMTMVIVTHEMGFAREVADRVIFMDGGVIVEDGTPEEVFEHTKEERTKDFL
SKVL

Nucleotide


Download         Length: 735 bp        

>NTDB_id=527236 K6974_RS03355 WP_002943067.1 635811..636545(+) (amiE) [Streptococcus suis strain FJSM5]
ATGTCTAATGCGATTATTTCTATCAAGGATTTACATAAGTACTTCGGAAAGAATGAGGTTCTAAAAGGAATTGATTTAGA
TATTCAACAAGGTCAGGTGGTTGTTATTATCGGTCCATCAGGGTCAGGGAAATCGACTTTCTTACGTACAATGAACCTCT
TAGAAGTGCCAACCAAGGGAACTGTTACATTTGAAGGTGTTGATATTACTGACAAGTCAAATGATATTTTCAAGATGCGT
GAAAAGATGGGAATGGTTTTTCAACAGTTCAATCTTTTTCCGAATATGACGGTATTAGATAATATTACTTTATCACCTAT
TAAGACAAAGGGAATTGCAAAGGATGAGGCTGAGAAGAAGGCTAAGGAATTACTTGAAAAGGTAGGATTGCCAGATAAGG
CGAATGCCTATCCACAAAGTCTTTCAGGTGGTCAGCAACAGCGGATCGCTATTGCACGTGGTCTGGCTATGGACCCAGAT
GTCCTGCTTTTTGATGAACCGACCTCTGCACTAGATCCTGAAATGGTTGGAGAAGTTCTTGCTGTAATGCAGGATTTGGC
CAAGTCAGGGATGACCATGGTTATCGTGACTCATGAGATGGGATTTGCGCGTGAGGTAGCTGACAGGGTTATCTTTATGG
ATGGCGGTGTCATCGTGGAGGATGGAACGCCTGAAGAAGTCTTTGAACATACCAAGGAAGAACGGACCAAGGATTTCTTG
TCTAAGGTCTTGTAA

Domains

Predicted by InterProScan.

ABC transporter (ABC_tran)

(21-169)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure
  AlphaFold DB A0A0H3MU26

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  amiE Streptococcus salivarius strain HSISS4

34.496

100

0.365
  amiE Streptococcus thermophilus LMG 18311

34.496

100

0.365
  amiE Streptococcus thermophilus LMD-9

34.496

100

0.365