Detailed information    

insolico Bioinformatically predicted

Overview

Name   comK/comK1   Type   Regulator
Locus tag   I6J06_RS03535 Genome accession   NZ_CP068069
Coordinates   705369..705932 (+) Length   187 a.a.
NCBI ID   WP_002508070.1    Uniprot ID   A0AAP7LV23
Organism   Staphylococcus equorum strain FDAARGOS_1149     
Function   promote expression of competence genes (predicted from homology)   
Competence regulation

Genomic Context

Location: 700369..710932
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  I6J06_RS03510 (I6J06_03505) - 701044..702552 (+) 1509 WP_021339510.1 bifunctional metallophosphatase/5'-nucleotidase -
  I6J06_RS03515 (I6J06_03510) - 702814..703416 (-) 603 WP_002508074.1 type II CAAX prenyl endopeptidase Rce1 family protein -
  I6J06_RS03520 (I6J06_03515) - 703423..703608 (-) 186 WP_002508073.1 YkvS family protein -
  I6J06_RS03525 (I6J06_03520) - 703809..704798 (+) 990 WP_002508072.1 lipoate--protein ligase -
  I6J06_RS03530 (I6J06_03525) - 704898..705116 (-) 219 WP_002508071.1 IDEAL domain-containing protein -
  I6J06_RS03535 (I6J06_03530) comK/comK1 705369..705932 (+) 564 WP_002508070.1 competence protein ComK Regulator
  I6J06_RS03550 (I6J06_03545) - 706611..706925 (+) 315 WP_021339511.1 ArsR/SmtB family transcription factor -
  I6J06_RS03555 (I6J06_03550) arsB 706925..708217 (+) 1293 WP_021339512.1 arsenite efflux transporter membrane subunit ArsB -
  I6J06_RS03560 (I6J06_03555) arsC 708235..708630 (+) 396 WP_021339513.1 arsenate reductase (thioredoxin) -
  I6J06_RS03565 (I6J06_03560) - 709103..709357 (+) 255 WP_021339514.1 GlsB/YeaQ/YmgE family stress response membrane protein -
  I6J06_RS03570 (I6J06_03565) - 709708..709920 (-) 213 WP_021339515.1 TM2 domain-containing protein -
  I6J06_RS03575 (I6J06_03570) - 710095..710652 (+) 558 WP_021339516.1 GNAT family N-acetyltransferase -

Sequence

Protein


Download         Length: 187 a.a.        Molecular weight: 22058.46 Da        Isoelectric Point: 9.1458

>NTDB_id=526900 I6J06_RS03535 WP_002508070.1 705369..705932(+) (comK/comK1) [Staphylococcus equorum strain FDAARGOS_1149]
MIQQYIIKKGDMALQPCNLSIGLNEGTCVLKYKEERDIVKERTHKIIDRSCRFYGSSYVFKKEDTMRITGINSKPPILFT
PLFPTYFFPTHSDRKEENTWINIHYVQTIRALKDKKCKITFVDNQTIVVNISAHSMHHQYLNGIYYYYMMDRAARVATFD
PESPIDYTKPQLNIYEALAKYSLFENK

Nucleotide


Download         Length: 564 bp        

>NTDB_id=526900 I6J06_RS03535 WP_002508070.1 705369..705932(+) (comK/comK1) [Staphylococcus equorum strain FDAARGOS_1149]
ATGATTCAACAATACATTATTAAAAAAGGTGATATGGCTCTTCAACCTTGTAATTTATCTATAGGACTAAATGAAGGTAC
TTGTGTATTAAAGTATAAGGAGGAGCGTGATATTGTAAAGGAACGGACACATAAGATTATAGATCGTTCATGTAGATTTT
ATGGTAGCAGTTATGTATTTAAAAAAGAAGACACAATGAGAATTACAGGTATTAATAGTAAACCCCCGATATTATTCACT
CCATTATTTCCTACTTATTTTTTTCCTACACATTCAGACCGAAAAGAAGAAAACACTTGGATCAATATTCATTATGTACA
AACCATAAGAGCTTTAAAAGATAAAAAATGTAAAATCACATTTGTCGATAACCAGACTATAGTTGTTAATATTTCAGCAC
ACAGTATGCATCATCAATACTTAAATGGTATATATTATTACTATATGATGGATAGAGCAGCTAGGGTGGCTACTTTTGAT
CCTGAATCTCCTATAGACTATACGAAACCACAATTAAATATTTATGAAGCATTAGCAAAATATTCTCTATTTGAAAATAA
ATAG

Domains

Predicted by InterproScan.

ComK protein (ComK)

(3-152)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  comK/comK1 Staphylococcus aureus MW2

51.913

97.861

0.508
  comK/comK1 Staphylococcus aureus N315

51.913

97.861

0.508