Detailed information    

insolico Bioinformatically predicted

Overview

Name   rcrQ   Type   Regulator
Locus tag   I6J12_RS07335 Genome accession   NZ_CP068060
Coordinates   1539063..1540823 (-) Length   586 a.a.
NCBI ID   WP_003035495.1    Uniprot ID   I0SFH9
Organism   Streptococcus anginosus strain FDAARGOS_1155     
Function   regulate competence (predicted from homology)   
Competence regulation

Genomic Context

Location: 1534063..1545823
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  I6J12_RS07310 (I6J12_07310) - 1534487..1535212 (-) 726 WP_003035547.1 GntR family transcriptional regulator -
  I6J12_RS07315 (I6J12_07315) celB 1535246..1536514 (-) 1269 WP_003035558.1 PTS cellobiose transporter subunit IIC -
  I6J12_RS07320 (I6J12_07320) - 1536677..1538074 (+) 1398 WP_003035556.1 glycoside hydrolase family 1 protein -
  I6J12_RS07325 (I6J12_07325) - 1538208..1538528 (-) 321 WP_003035457.1 PTS cellobiose transporter subunit IIA -
  I6J12_RS07330 (I6J12_07330) - 1538539..1538853 (-) 315 WP_003031794.1 PTS cellobiose transporter subunit IIB -
  I6J12_RS07335 (I6J12_07335) rcrQ 1539063..1540823 (-) 1761 WP_003035495.1 ABC transporter ATP-binding protein Regulator
  I6J12_RS07340 (I6J12_07340) - 1540813..1542575 (-) 1763 Protein_1466 ABC transporter ATP-binding protein -
  I6J12_RS07345 (I6J12_07345) - 1542568..1543026 (-) 459 WP_003035559.1 MarR family winged helix-turn-helix transcriptional regulator -
  I6J12_RS07350 (I6J12_07350) - 1543183..1543593 (-) 411 WP_003035443.1 peptide deformylase -
  I6J12_RS07355 (I6J12_07355) scrK 1543661..1544560 (-) 900 WP_020999796.1 fructokinase ScrK -

Sequence

Protein


Download         Length: 586 a.a.        Molecular weight: 65141.30 Da        Isoelectric Point: 6.0278

>NTDB_id=526804 I6J12_RS07335 WP_003035495.1 1539063..1540823(-) (rcrQ) [Streptococcus anginosus strain FDAARGOS_1155]
MENKKSSLFSQVEPYIKGFQFPLLVAFVGVILSSVITVYGPVKLKEITNLITEGMRSRIDLKAISNIALFLAVLYVVGAV
LNYMQSFIISSVVQHFSKRLRTAIAEKINKLPLRYFDSHSQGDTLSRVTNDVDTVGQSLNQSLGTVISSSLLLIAVLFMM
FYNNVVLSFVTIGSVLIGFVFVALIMGKSQRFFRTQQENLASVNGYVEEMYSGHNVIVSYNAAEESKATFQTLNTNLYNS
MWKSQFISGIMMPLMMFVGNFGYVMVVLVGASMALNGDVTMGTIVAFMVYVRIFSQPLSQIAQGITTLQQASAAMGRVFE
FLAEPEMENDEHKAQQLTTLKGDVTFDKVFFGYNPDRTIIHDFSANAKAGQKIAIVGPTGAGKTTIVNLLMKFYEIDKGR
ITIDGVDTKQMKRSEVHDAFSMVLQDTWLFEGTIKENLIYNQKNISDEAVVAAAKAVGVHHFIKTLPKGYDMVLDDTVSL
SVGQKQLLTIARALLKDAPLLILDEATSSVDTRTEELIQKAMDKLMEGRTSFVIAHRLSTIRNADLILVMRNGNIIEQGN
HDQLMEENGFYADLYNSQFDEDAEYA

Nucleotide


Download         Length: 1761 bp        

>NTDB_id=526804 I6J12_RS07335 WP_003035495.1 1539063..1540823(-) (rcrQ) [Streptococcus anginosus strain FDAARGOS_1155]
ATGGAAAATAAAAAATCATCTTTATTTAGCCAAGTGGAACCCTATATCAAAGGATTCCAGTTTCCCTTGCTCGTTGCATT
TGTGGGAGTAATACTATCTAGTGTTATCACGGTTTATGGTCCGGTCAAATTAAAAGAAATTACCAATCTCATCACAGAAG
GAATGAGAAGTCGGATTGATCTGAAGGCTATCTCTAATATTGCTCTTTTCTTAGCAGTTTTATATGTGGTGGGTGCTGTA
TTAAATTATATGCAATCCTTTATTATTTCGTCCGTCGTTCAGCATTTTTCAAAACGTTTACGGACAGCCATTGCGGAGAA
AATTAATAAATTACCCTTGCGGTATTTTGATAGTCATTCGCAAGGGGACACTCTTTCACGAGTCACTAATGACGTGGATA
CTGTTGGACAATCGCTGAACCAAAGTTTAGGAACAGTGATTTCATCAAGTTTGCTTCTCATTGCTGTTCTCTTTATGATG
TTTTATAACAACGTGGTTCTATCCTTTGTAACGATTGGATCGGTTTTGATTGGTTTTGTCTTTGTTGCGTTGATTATGGG
CAAATCACAACGGTTTTTCCGCACACAACAAGAGAATCTTGCTAGTGTCAATGGATATGTGGAAGAGATGTATTCTGGTC
ACAATGTCATTGTCAGCTACAATGCTGCAGAGGAATCTAAAGCAACCTTTCAAACGCTCAATACCAATCTTTACAACAGC
ATGTGGAAATCACAATTCATTTCAGGGATTATGATGCCGCTTATGATGTTTGTAGGGAACTTCGGTTACGTTATGGTTGT
TTTGGTTGGGGCGAGCATGGCCTTGAATGGCGATGTCACTATGGGAACGATTGTTGCCTTTATGGTATATGTACGGATTT
TCTCTCAACCGTTGTCACAAATTGCACAAGGGATTACTACTCTTCAACAAGCTAGCGCTGCTATGGGACGCGTATTTGAA
TTTTTAGCAGAGCCTGAAATGGAAAATGATGAGCACAAAGCGCAACAACTCACGACCCTAAAAGGAGATGTTACCTTTGA
TAAGGTATTCTTTGGTTATAATCCAGATCGAACGATTATTCATGATTTCTCTGCCAATGCAAAAGCAGGGCAAAAAATTG
CCATTGTCGGTCCGACCGGTGCTGGGAAGACGACCATTGTCAACTTGCTCATGAAATTTTATGAGATTGATAAGGGGCGC
ATTACAATTGACGGTGTTGATACGAAGCAAATGAAACGTTCTGAGGTACACGATGCCTTCTCCATGGTTCTCCAAGACAC
TTGGTTATTTGAGGGAACGATTAAAGAAAATTTGATTTACAATCAGAAAAATATTTCTGACGAAGCAGTTGTGGCAGCTG
CCAAAGCTGTTGGGGTTCATCACTTCATCAAGACTCTACCAAAAGGATACGATATGGTGCTGGACGATACAGTAAGTCTT
TCTGTGGGGCAAAAGCAATTGCTGACCATTGCGCGTGCCCTTCTTAAAGATGCTCCGTTGCTTATCTTGGACGAAGCGAC
TTCATCTGTTGATACGCGGACAGAAGAATTGATTCAAAAAGCGATGGATAAACTAATGGAAGGACGAACTTCCTTTGTCA
TTGCTCACCGTTTGTCAACAATTCGTAATGCTGATTTGATTTTGGTCATGCGTAATGGTAATATCATTGAACAAGGAAAT
CACGATCAATTGATGGAAGAAAATGGCTTCTATGCTGATCTTTACAATAGTCAATTCGATGAAGACGCAGAGTATGCGTA
A

Domains

Predicted by InterproScan.

ABC transporter transmembrane region (ABC_membrane)

(23-298)

ABC transporter (ABC_tran)

(361-508)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure
  AlphaFold DB I0SFH9

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  rcrQ Streptococcus mutans UA159

71.478

99.317

0.71