Detailed information NTG0526755

Bioinformatically predicted

Overview

• Name: amiF
• Type: Regulator
• Locus tag: I6J14_RS09325
• Genome accession: NZ_CP068057
• Coordinates: 1857232..1858164 (+)
• Length: 310 a.a.
• NCBI ID: WP_115253134.1
• Uniprot ID: -
• Organism: Streptococcus dysgalactiae strain FDAARGOS_1157
• Function: internalize XIP (predicted from homology) Competence regulation

Genomic Context

Location: 1852232..1863164

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
I6J14_RS09305 (I6J14_09305)	-	1852297..1853952 (+)	1656	WP_003052797.1	peptide ABC transporter substrate-binding protein	-
I6J14_RS09310 (I6J14_09310)	-	1854220..1855134 (+)	915	WP_003052794.1	ABC transporter permease	-
I6J14_RS09315 (I6J14_09315)	-	1855144..1856175 (+)	1032	WP_115253135.1	ABC transporter permease	-
I6J14_RS09320 (I6J14_09320)	oppD	1856187..1857239 (+)	1053	WP_003052788.1	ABC transporter ATP-binding protein	Regulator
I6J14_RS09325 (I6J14_09325)	amiF	1857232..1858164 (+)	933	WP_115253134.1	ATP-binding cassette domain-containing protein	Regulator
I6J14_RS09330 (I6J14_09330)	rnjA	1858344..1860026 (-)	1683	WP_003052786.1	ribonuclease J1	-
I6J14_RS09335 (I6J14_09335)	-	1860028..1860258 (-)	231	WP_003052784.1	DNA-dependent RNA polymerase subunit epsilon	-
I6J14_RS09340 (I6J14_09340)	tsaB	1860544..1861242 (+)	699	WP_003052781.1	tRNA (adenosine(37)-N6)-threonylcarbamoyltransferase complex dimerization subunit type 1 TsaB	-
I6J14_RS09345 (I6J14_09345)	rimI	1861244..1861669 (+)	426	WP_003052778.1	ribosomal protein S18-alanine N-acetyltransferase	-
I6J14_RS09350 (I6J14_09350)	tsaD	1861659..1862675 (+)	1017	WP_003052775.1	tRNA (adenosine(37)-N6)-threonylcarbamoyltransferase complex transferase subunit TsaD	-

Sequence

Protein

• Length: 310 a.a.
• Molecular weight: 35190.07 Da
• Isoelectric Point: 6.8433

>NTDB_id=526755 I6J14_RS09325 WP_115253134.1 1857232..1858164(+) (amiF) [Streptococcus dysgalactiae strain FDAARGOS_1157]
MNDNRKKLVELKNVSLTFNKGKKNEVKAIDNVSFDIYEGEVFGLVGESGSGKTTVGRAILKLYDINEGEIIFNGETVSHL
KGKDLRTFRKDAQMIFQDPQASLNGRMKIRDIVAEGLDIHGLTASKAEREERVQELLDLVGLNKDHLTRYPHEFSGGQRQ
RIGIARALAVKPKFIIADEPISALDVSIQAQVVNLMQKLQYKRGLTYLFIAHDLSMVKYISDRIGVMHWGKMLEIGTSDD
VYNHPIHPYTKSLLSAIPEPDPDKERQRVADVYDPSQELDGQERQMHEITPGHFVLATQEEAGQYRREYR

Nucleotide

• Length: 933 bp

>NTDB_id=526755 I6J14_RS09325 WP_115253134.1 1857232..1858164(+) (amiF) [Streptococcus dysgalactiae strain FDAARGOS_1157]
ATGAATGATAATCGAAAGAAATTAGTAGAGTTAAAAAATGTCTCCTTAACTTTCAATAAGGGAAAGAAAAACGAAGTCAA
AGCCATTGATAATGTGAGCTTTGATATTTATGAAGGGGAAGTGTTTGGACTGGTTGGGGAATCTGGATCAGGAAAAACAA
CTGTTGGTCGTGCCATTTTAAAGCTTTATGATATTAATGAAGGGGAAATTATTTTTAATGGTGAAACTGTTTCTCATTTG
AAAGGGAAAGACTTGCGGACCTTTCGTAAGGATGCTCAGATGATTTTCCAAGATCCTCAGGCTAGTCTTAACGGCCGTAT
GAAAATCAGAGATATTGTGGCAGAAGGGCTAGATATTCATGGACTAACAGCTTCAAAAGCAGAACGAGAAGAACGCGTGC
AAGAACTCCTTGATTTGGTTGGGTTGAATAAGGATCATTTGACACGTTACCCCCATGAATTTTCTGGTGGTCAACGTCAA
CGGATTGGGATTGCCCGTGCTTTGGCGGTGAAACCTAAATTTATCATTGCTGATGAACCTATCTCAGCTCTTGATGTGTC
GATTCAGGCCCAGGTGGTTAACTTGATGCAAAAGCTTCAGTACAAACGTGGATTGACCTATCTTTTTATTGCCCATGACT
TGTCAATGGTCAAATACATTTCTGACCGTATCGGAGTCATGCACTGGGGTAAAATGTTGGAGATTGGGACCTCAGATGAT
GTCTATAATCATCCTATTCATCCTTATACCAAGAGCCTACTCTCAGCTATTCCTGAGCCAGATCCAGACAAAGAACGTCA
GCGGGTGGCTGATGTGTATGATCCAAGTCAAGAATTGGACGGCCAAGAACGTCAGATGCATGAGATTACTCCAGGCCATT
TTGTCTTAGCTACCCAAGAAGAAGCAGGTCAATATCGACGGGAGTATCGTTAA

Domains

Predicted by InterproScan.

• Oligopeptide/dipeptide transporter, C-terminal region (oligo_HPY) (233-268)

• ABC transporter (ABC_tran) (30-181)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
amiF	Streptococcus thermophilus LMD-9	54.098	98.387	0.532
amiF	Streptococcus thermophilus LMG 18311	53.77	98.387	0.529
amiF	Streptococcus salivarius strain HSISS4	53.443	98.387	0.526