Detailed information    

insolico Bioinformatically predicted

Overview

Name   rcrP   Type   Regulator
Locus tag   JJJ15_RS00115 Genome accession   NZ_CP067336
Coordinates   24835..26607 (+) Length   590 a.a.
NCBI ID   WP_200511017.1    Uniprot ID   A0A974RUD2
Organism   Actinomyces sp. HMT897     
Function   regulate competence (predicted from homology)   
Competence regulation

Genomic Context

Location: 19835..31607
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  JJJ15_RS00090 (JJJ15_00090) - 20144..20743 (+) 600 WP_200511012.1 TetR family transcriptional regulator -
  JJJ15_RS00095 (JJJ15_00095) - 20906..21682 (+) 777 WP_200511013.1 ABC transporter ATP-binding protein -
  JJJ15_RS00100 (JJJ15_00100) - 21679..22425 (+) 747 WP_200511014.1 ABC transporter permease -
  JJJ15_RS00105 (JJJ15_00105) - 22675..23778 (+) 1104 WP_200511015.1 zinc-binding dehydrogenase -
  JJJ15_RS00110 (JJJ15_00110) - 24072..24737 (+) 666 WP_200511016.1 MarR family winged helix-turn-helix transcriptional regulator -
  JJJ15_RS00115 (JJJ15_00115) rcrP 24835..26607 (+) 1773 WP_200511017.1 ABC transporter ATP-binding protein Regulator
  JJJ15_RS00120 (JJJ15_00120) - 26600..28534 (+) 1935 WP_200511018.1 ABC transporter ATP-binding protein -
  JJJ15_RS00125 (JJJ15_00125) - 28722..29804 (+) 1083 WP_200511019.1 PhoH family protein -
  JJJ15_RS00130 (JJJ15_00130) ybeY 29794..30252 (+) 459 WP_106108990.1 rRNA maturation RNase YbeY -
  JJJ15_RS00135 (JJJ15_00135) - 30249..31523 (+) 1275 WP_200511020.1 hemolysin family protein -

Sequence

Protein


Download         Length: 590 a.a.        Molecular weight: 63117.58 Da        Isoelectric Point: 7.7347

>NTDB_id=525440 JJJ15_RS00115 WP_200511017.1 24835..26607(+) (rcrP) [Actinomyces sp. HMT897]
MLNVLRRLSSRQRQMAGAALIFIVLQVWLDLRLPDYMSTITTLVTTEDSAMSEVLKQGGYMLACALGSLVCAVVVGYLAA
RIAAGLARTLREEVFNHSLAFSDAEVGRFSAPSLINRATNDVTQIQNVIAMGMQAVVKAPILAVWAILKIADKAWEWTTA
TGVAVIVLCMMLGVIIAVAIPRFQRIQGLTDVLGRVSREQLTGIRVVRAYNAEAYQERKFADANDDLTGNNLVANRVMAI
MSPGMTFISSTLTLSVYAIGAHLVEAAAGPQRVSLFADMVVFSNYAMQVVMAFMLLTLVFILLPRAQVSARRITEVLSTR
PSVADAPRAASPGQDAAAPGTVTFENVSFRYAGAGDDALTGISFTAAPGQTVAFIGATGSGKSTLVNLVPRLADVTAGRV
LVDGRDVRDYSLHDLRGRIGYVPQRAYLFSGTVASNVAYPRGDELTEQGRDAVEQALETAQASGFVAEMEGGADATITQG
GTNVSGGQRQRLSIARALAASPGILIFDDSFSALDYTTDRALRRALARRDPRATTLVVAQRIGTIRDADQIIVLEHGRVV
GQGTHAELLATCPTYQEIASSQLSKEELRA

Nucleotide


Download         Length: 1773 bp        

>NTDB_id=525440 JJJ15_RS00115 WP_200511017.1 24835..26607(+) (rcrP) [Actinomyces sp. HMT897]
ATGCTGAACGTCCTGAGACGCCTCTCCTCCAGGCAGAGGCAGATGGCGGGCGCCGCCCTCATTTTTATCGTGCTCCAGGT
CTGGCTGGATCTGAGGCTCCCGGACTACATGTCCACCATTACCACCCTGGTGACCACCGAGGACTCGGCCATGAGCGAGG
TGCTCAAGCAGGGCGGCTACATGCTCGCCTGCGCCCTGGGCTCCCTGGTCTGCGCGGTCGTGGTGGGCTACCTCGCCGCA
CGCATCGCCGCGGGCCTGGCCCGGACCCTGCGCGAGGAGGTCTTCAACCACTCCCTGGCCTTCTCCGACGCCGAGGTCGG
CCGCTTCTCGGCACCGAGCCTGATCAACCGTGCCACCAACGACGTCACCCAGATCCAGAACGTCATCGCCATGGGCATGC
AGGCGGTCGTCAAGGCCCCCATCCTGGCGGTGTGGGCGATCCTCAAGATCGCGGACAAGGCCTGGGAGTGGACCACCGCC
ACGGGCGTGGCCGTCATCGTCCTGTGCATGATGCTCGGCGTCATCATCGCCGTGGCCATCCCGCGCTTCCAGCGCATCCA
GGGCCTGACCGACGTCCTGGGGCGGGTCTCGCGCGAGCAGCTCACCGGTATCCGCGTGGTGCGCGCCTACAACGCCGAGG
CCTACCAGGAGCGCAAGTTCGCCGACGCCAATGACGACCTGACCGGCAACAACCTCGTGGCCAACCGGGTCATGGCGATC
ATGAGCCCGGGCATGACCTTTATCTCCTCGACCCTGACCCTGTCGGTCTACGCCATTGGCGCCCACCTGGTGGAGGCCGC
CGCCGGCCCGCAGCGCGTGTCCCTCTTCGCGGACATGGTGGTCTTCTCGAACTACGCCATGCAGGTGGTCATGGCCTTTA
TGCTCCTGACGCTGGTCTTCATCCTCCTGCCGCGCGCCCAGGTCTCCGCCCGCCGCATTACCGAGGTCCTGAGCACCCGG
CCCAGCGTCGCCGACGCCCCCCGGGCGGCCTCACCCGGTCAGGACGCGGCCGCACCGGGCACCGTCACCTTCGAGAACGT
GTCCTTCCGCTACGCGGGGGCGGGCGACGACGCCCTGACCGGTATCAGCTTCACCGCCGCCCCCGGCCAGACGGTCGCCT
TTATCGGCGCCACCGGGAGCGGCAAGTCCACCCTGGTCAACCTCGTCCCCCGCCTTGCCGACGTCACCGCCGGACGCGTC
CTGGTGGACGGCCGGGACGTACGCGACTACAGCCTGCACGACCTGCGCGGCCGCATCGGCTACGTGCCCCAGCGCGCCTA
CCTGTTCAGCGGGACCGTGGCCTCCAACGTCGCCTACCCCCGTGGGGACGAGCTCACCGAGCAGGGGCGTGACGCCGTCG
AGCAGGCCCTGGAGACCGCCCAGGCCTCCGGGTTCGTCGCCGAGATGGAGGGCGGGGCCGACGCCACCATCACCCAGGGC
GGCACCAACGTCTCCGGCGGGCAGCGCCAGCGCCTGTCCATTGCCCGGGCCCTGGCCGCCAGCCCCGGGATCCTCATCTT
CGACGACTCCTTCTCGGCCCTGGACTACACCACCGACCGCGCCCTGCGCCGCGCCCTGGCCCGACGCGACCCGCGCGCCA
CCACCCTCGTGGTGGCCCAGCGCATCGGCACCATCCGCGACGCCGACCAGATCATCGTCCTGGAGCACGGCCGGGTGGTG
GGCCAGGGGACCCACGCGGAGCTCCTCGCCACCTGCCCCACCTACCAGGAGATCGCCAGCTCTCAGCTCAGCAAGGAGGA
GCTCCGTGCCTGA

Domains

Predicted by InterproScan.

ABC transporter (ABC_tran)

(359-510)

ABC transporter transmembrane region (ABC_membrane)

(19-292)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  rcrP Streptococcus mutans UA159

52.658

100

0.537