Detailed information    

insolico Bioinformatically predicted

Overview

Name   uvrA   Type   Machinery gene
Locus tag   K2224_RS25470 Genome accession   NZ_CP081496
Coordinates   5737563..5740661 (-) Length   1032 a.a.
NCBI ID   WP_221908829.1    Uniprot ID   -
Organism   Streptomyces sp. BHT-5-2     
Function   homologous recombination (predicted from homology)   
Homologous recombination

Genomic Context

Location: 5732563..5745661
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  - uvrA 5737563..5740661 (-) 3099 - - Machinery gene

Sequence

Protein


Download         Length: 1032 a.a.        Molecular weight: 112560.13 Da        Isoelectric Point: 8.6396

>NTDB_id=522840 K2224_RS25470 WP_221908829.1 5737563..5740661(-) (uvrA) [Streptomyces sp. BHT-5-2]
MADRLIVRGAREHNLRNVSLDLPRDSLIVFTGLSGSGKSSLAFDTIFAEGQRRYVESLSSYARQFLGQMDKPDVDFIEGL
SPAVSIDQKSTSRNPRSTVGTITEVYDYLRLLFARIGKPHCPECARPIARQSPQAIVDKVLELPEGSRFQVLSPLVRERK
GEFVDLFSDLQTKGYSRARVDGETVQLTDPPKLKKQEKHTIEVVVDRLTVKDSAKRRLTDSVETALGLSGGMVILDFVDL
DADDPQRERMYSEHLYCAYDDLSFEELEPRSFSFNSPFGACPDCTGIGTRMEVDPELIIPDEERSLDEGAIHPWSGGHTK
DYFGRLVGALADALGFRTDIPWAGLPQRAKKALLYGHKTQIEVRYRNRYGRQRAYTTAFEGVVPFVKRRHSEAESDSSRE
RFEGYMREVPCPTCDGTRLKPIVLAVTVQEKSIAEVAAMSISDCADFLRTMTLNAREKTIAERVLKEVNERLKFLVDVGL
DYLSLNRAAGTLSGGEAQRIRLATQIGSGLVGVLYVLDEPSIGLHQRDNHRLIETLVRLRDMGNTLIVVEHDEDTIKVAD
WVVDIGPGAGEHGGKVVHSGPMKQLLANKDSITGQYLAGKKAIATPDVRRTTDPARQLTVHGAKENNLRDIDVSFPLGVL
SAVTGVSGSGKSTLVNDILYTHLARELNGAKSVPGRHTRVAGDDLVDKVVHVDQSPIGRTPRSNPATYTGVFDHVRKLFA
ETMEAKVRGYLPGRFSFNVKGGRCENCSGDGTIKIEMNFLPDVYVPCEVCHGARYNRETLEVHYKGKSIAEVLDMPIEEA
LSFFEAVPTIARHLRTLNEVGLGYVRLGQSAPTLSGGEAQRVKLASELQKRSTGSTVYVLDEPTTGLHFEDISKLIKVLS
GLVDKGNTVIVIEHNLDVIKTADWVIDMGPEGGSGGGMVVAEGTPEQVAGIPASHTGKFLRDILGERVSDAAPVDGGPRK
PAARKTAAKKAVAAAKSAGKTTVTASTAAKKTAAKKTTAKKTTAKAAATAAEKAPAKKTAAKKTATRARRAS

Nucleotide


Download         Length: 3099 bp        

>NTDB_id=522840 K2224_RS25470 WP_221908829.1 5737563..5740661(-) (uvrA) [Streptomyces sp. BHT-5-2]
GTGGCCGACCGTCTCATCGTCCGTGGCGCTCGCGAGCACAACCTCCGCAACGTCTCGCTCGACCTCCCCCGCGACTCCCT
CATCGTCTTCACGGGGCTCTCCGGGTCGGGCAAGTCCTCGCTCGCCTTCGACACGATCTTCGCCGAGGGGCAGCGGCGCT
ATGTCGAGTCGCTCTCCTCGTACGCCCGGCAGTTCCTCGGGCAGATGGACAAGCCCGATGTGGACTTCATCGAGGGCCTG
TCCCCCGCGGTCTCGATCGACCAGAAGTCGACCTCGCGCAACCCGCGCTCCACGGTCGGCACGATCACCGAGGTCTACGA
CTACCTCCGCCTGCTCTTCGCCCGGATCGGCAAGCCGCACTGCCCGGAGTGCGCGCGCCCGATCGCCCGGCAGTCGCCCC
AGGCCATCGTCGACAAGGTCCTGGAGCTCCCCGAGGGCAGCCGCTTCCAGGTGCTCTCGCCGCTGGTGCGCGAGCGCAAG
GGCGAGTTCGTCGACCTCTTCTCCGACCTCCAGACCAAGGGCTACAGCCGGGCCCGGGTCGACGGGGAGACCGTCCAGCT
CACCGACCCGCCGAAGCTGAAGAAGCAGGAGAAGCACACCATCGAGGTGGTCGTCGACCGCCTCACGGTCAAGGACAGCG
CCAAGCGCCGGCTGACCGACTCCGTGGAGACCGCCCTCGGGCTCTCCGGCGGCATGGTCATCCTCGACTTCGTCGACCTC
GACGCCGACGACCCGCAGCGCGAGCGGATGTACTCCGAGCACCTCTACTGCGCCTACGACGACCTCTCCTTCGAGGAGCT
GGAGCCCCGCTCCTTCTCCTTCAACTCGCCCTTCGGCGCCTGCCCGGACTGCACCGGCATCGGCACCCGCATGGAGGTCG
ACCCCGAGCTGATCATCCCGGACGAGGAGCGCTCGCTCGACGAGGGCGCCATCCACCCCTGGTCCGGCGGCCACACCAAG
GACTACTTCGGCCGTCTGGTCGGCGCGCTCGCCGACGCCCTGGGCTTCCGCACGGACATCCCCTGGGCCGGCCTGCCGCA
GCGCGCCAAGAAGGCCCTGCTGTACGGCCACAAGACCCAGATCGAGGTCCGCTACCGCAACCGCTACGGCCGCCAGCGGG
CCTACACCACCGCCTTCGAGGGCGTGGTGCCGTTCGTCAAGCGGCGGCACAGCGAGGCGGAGAGCGACAGCAGCCGGGAG
CGCTTCGAGGGCTATATGCGCGAGGTGCCCTGCCCGACCTGCGACGGCACCCGGCTCAAGCCGATCGTGCTCGCCGTCAC
GGTCCAGGAGAAGTCGATCGCCGAGGTCGCGGCCATGTCGATCAGCGACTGCGCCGACTTCCTGCGCACCATGACGCTCA
ACGCCCGCGAGAAGACCATCGCCGAGCGGGTCCTCAAGGAGGTCAACGAGCGGCTGAAGTTCCTGGTCGACGTCGGCCTG
GACTACCTCTCGCTGAACCGCGCGGCCGGCACCCTCTCCGGCGGCGAGGCCCAGCGCATCCGCCTCGCCACCCAGATCGG
CTCCGGCCTGGTCGGCGTCCTCTACGTCCTCGACGAGCCGTCGATCGGCCTGCACCAGCGGGACAACCACCGGCTGATCG
AGACCCTGGTGCGGCTGCGCGACATGGGCAACACCCTGATCGTGGTGGAGCACGACGAGGACACCATCAAGGTCGCCGAC
TGGGTCGTCGACATCGGCCCCGGTGCCGGCGAGCACGGCGGCAAGGTCGTCCACAGCGGCCCGATGAAGCAGCTGCTGGC
CAACAAGGACTCGATCACCGGCCAGTACCTCGCCGGCAAGAAGGCCATCGCGACGCCGGACGTCCGCCGCACCACCGACC
CGGCCCGGCAGCTGACGGTCCACGGCGCGAAGGAGAACAACCTCCGCGACATCGACGTCTCCTTCCCGCTCGGGGTGCTC
TCCGCCGTCACCGGCGTCTCCGGCTCCGGCAAGTCGACGCTGGTCAACGACATCCTCTACACCCACCTCGCGCGCGAGCT
GAACGGCGCCAAGTCGGTCCCCGGCCGGCACACCCGGGTCGCCGGCGACGACCTCGTCGACAAGGTCGTGCACGTCGACC
AGTCGCCGATCGGCCGGACCCCGCGCTCCAACCCGGCCACCTACACCGGCGTCTTCGACCACGTCCGCAAGCTCTTCGCG
GAGACGATGGAGGCCAAGGTCCGCGGCTATCTGCCGGGGCGCTTCTCCTTCAACGTCAAGGGCGGCCGCTGCGAGAACTG
CTCCGGCGACGGCACCATCAAGATCGAGATGAACTTCCTCCCGGACGTCTACGTCCCGTGCGAGGTCTGCCACGGCGCGC
GCTACAACCGCGAGACGCTGGAGGTGCACTACAAGGGCAAGTCCATCGCCGAGGTGCTGGACATGCCCATCGAGGAGGCA
CTGAGCTTCTTCGAGGCGGTGCCCACCATCGCCCGCCACCTCAGGACGCTCAACGAGGTCGGTCTCGGCTACGTCCGGCT
CGGCCAGTCCGCGCCGACCCTCTCCGGCGGCGAGGCGCAGCGCGTCAAGCTGGCCAGCGAGCTCCAGAAGCGCTCCACCG
GCAGCACCGTCTACGTCCTCGACGAGCCCACCACCGGGCTGCACTTCGAGGACATCAGCAAGCTCATCAAGGTGCTGTCC
GGCCTGGTCGACAAGGGCAACACGGTCATCGTCATCGAGCACAACCTCGATGTGATCAAGACCGCGGACTGGGTCATCGA
CATGGGCCCCGAGGGCGGCAGCGGCGGTGGCATGGTCGTCGCCGAGGGCACCCCGGAGCAGGTCGCGGGCATCCCGGCCA
GCCACACCGGCAAGTTCCTGCGGGACATCCTCGGCGAGCGGGTCAGCGACGCGGCGCCGGTCGACGGCGGGCCCCGGAAG
CCGGCCGCCCGGAAGACCGCGGCGAAGAAGGCGGTGGCCGCCGCCAAGTCCGCCGGGAAGACGACGGTGACGGCCTCGAC
CGCGGCGAAGAAGACCGCCGCCAAGAAGACCACGGCCAAGAAGACCACGGCCAAGGCCGCGGCGACGGCGGCCGAGAAGG
CACCGGCCAAGAAGACCGCCGCCAAGAAGACGGCGACGCGGGCCCGCCGGGCCTCCTGA

Domains

Predicted by InterProScan.

UvrA DNA-binding domain (UvrA_DNA-bind)

(294-403)

UvrA interaction domain (UvrA_inter)

(131-238)

ABC transporter (ABC_tran)

(628-864)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  uvrA Streptococcus pneumoniae R6

56.614

91.57

0.518
  uvrA Streptococcus pneumoniae TIGR4

56.614

91.57

0.518
  uvrA Streptococcus pneumoniae D39

56.614

91.57

0.518