Detailed information
Bioinformatically predicted
Overview
| Name | pilU | Type | Machinery gene |
| Locus tag | LPO_RS11305 | Genome accession | NC_018139 |
| Coordinates | 2531288..2532409 (-) | Length | 373 a.a. |
| NCBI ID | WP_014842283.1 | Uniprot ID | A0AAV2V075 |
| Organism | Legionella pneumophila subsp. pneumophila | ||
| Function | assembly of type IV pilus (predicted from homology) DNA binding and uptake |
||
Genomic Context
Location: 2526288..2537409
| Locus tag | Gene name | Coordinates (strand) | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| LPO_RS11290 (LPO_2397) | - | 2527174..2527611 (-) | 438 | WP_015444141.1 | hypothetical protein | - |
| LPO_RS11295 (LPO_2398) | - | 2527888..2529183 (+) | 1296 | WP_014842281.1 | serine/threonine transporter | - |
| LPO_RS11300 (LPO_2399) | ankK | 2529276..2531201 (-) | 1926 | WP_014842282.1 | Dot/Icm T4SS effector AnkK/LegA5 | - |
| LPO_RS11305 (LPO_2400) | pilU | 2531288..2532409 (-) | 1122 | WP_014842283.1 | PilT/PilU family type 4a pilus ATPase | Machinery gene |
| LPO_RS11310 (LPO_2401) | - | 2532499..2534427 (-) | 1929 | WP_014842284.1 | FAD/FMN-containing dehydrogenase | - |
| LPO_RS11315 (LPO_2402) | - | 2534452..2535282 (-) | 831 | WP_027220503.1 | phytanoyl-CoA dioxygenase family protein | - |
| LPO_RS11320 (LPO_2403) | radA | 2535279..2536634 (-) | 1356 | WP_027220504.1 | DNA repair protein RadA | - |
Sequence
Protein
Download Length: 373 a.a. Molecular weight: 41732.03 Da Isoelectric Point: 5.4724
>NTDB_id=52143 LPO_RS11305 WP_014842283.1 2531288..2532409(-) (pilU) [Legionella pneumophila subsp. pneumophila]
MDITPFFKLMVDKGASDLFFSVGAPPNIKIEGITSPIGQVPIKSNQMAEIVLSIMNDAQQKEFESKMELNMAFSLAGVGR
FRINLFRQRGEVAMVVRYIKGEIPSIEDLNLPQILKSLVLELRGLVLVVGSTGSGKSTTLATMINHRNENHRGHILTIED
PIEYIHQHKKSIVDQREIGIDTLSYDNALKNAMREAPDVILIGEIRDLNSMKHAIAYAETGHLCISTLHANNANQALDRV
INFFPDEARQQILLDLSLNLKAIISLRLIPGVDNQRVAAVEILINSPYISDLIEKGKIDDIKEVMARSTEQGMQTFDQAL
FNLYKEGKITKENAIKYADSKNNVGLQIRLGEEKSFNIQDENLQIQPDDIDKV
MDITPFFKLMVDKGASDLFFSVGAPPNIKIEGITSPIGQVPIKSNQMAEIVLSIMNDAQQKEFESKMELNMAFSLAGVGR
FRINLFRQRGEVAMVVRYIKGEIPSIEDLNLPQILKSLVLELRGLVLVVGSTGSGKSTTLATMINHRNENHRGHILTIED
PIEYIHQHKKSIVDQREIGIDTLSYDNALKNAMREAPDVILIGEIRDLNSMKHAIAYAETGHLCISTLHANNANQALDRV
INFFPDEARQQILLDLSLNLKAIISLRLIPGVDNQRVAAVEILINSPYISDLIEKGKIDDIKEVMARSTEQGMQTFDQAL
FNLYKEGKITKENAIKYADSKNNVGLQIRLGEEKSFNIQDENLQIQPDDIDKV
Nucleotide
Download Length: 1122 bp
>NTDB_id=52143 LPO_RS11305 WP_014842283.1 2531288..2532409(-) (pilU) [Legionella pneumophila subsp. pneumophila]
ATGGATATTACTCCTTTTTTTAAGCTCATGGTCGATAAAGGTGCCTCAGATTTGTTTTTCAGTGTCGGGGCACCACCAAA
TATTAAAATCGAGGGCATCACATCACCTATTGGCCAGGTTCCTATCAAATCGAATCAAATGGCAGAAATTGTTTTATCTA
TTATGAATGACGCACAGCAAAAAGAATTTGAGTCTAAAATGGAACTCAATATGGCTTTTTCATTAGCTGGAGTAGGGCGT
TTCCGAATCAATTTATTCAGGCAACGTGGCGAAGTGGCTATGGTGGTGCGTTACATCAAGGGCGAAATACCTTCTATAGA
AGATTTAAATCTTCCTCAAATTTTAAAGTCTCTGGTCTTGGAGTTGCGAGGTTTAGTATTGGTTGTTGGGTCCACGGGAT
CTGGTAAATCAACAACTCTGGCCACGATGATCAACCACCGTAATGAAAATCACAGAGGGCATATTTTAACAATAGAGGAT
CCTATTGAATATATACATCAACATAAAAAATCAATAGTTGATCAACGAGAGATAGGTATTGATACTCTAAGCTATGACAA
TGCATTGAAAAACGCAATGAGAGAAGCGCCTGATGTGATATTAATTGGTGAAATTCGTGATCTTAACTCAATGAAACATG
CGATAGCTTATGCTGAAACAGGACATTTGTGCATTTCTACTTTGCATGCCAATAACGCCAATCAGGCTCTGGATAGAGTG
ATTAATTTTTTCCCCGATGAGGCAAGACAACAGATATTATTAGATTTATCTCTTAATTTAAAAGCAATCATTTCATTACG
TTTGATACCAGGAGTTGATAATCAACGTGTCGCAGCGGTGGAGATCTTGATTAACTCTCCTTACATTTCCGATTTGATTG
AAAAAGGGAAGATAGACGATATTAAAGAAGTCATGGCAAGAAGCACGGAACAAGGCATGCAGACTTTCGATCAGGCTTTA
TTTAATTTATATAAAGAAGGAAAAATTACCAAAGAAAATGCGATTAAGTATGCTGATTCAAAAAACAATGTGGGTTTACA
AATTCGATTGGGCGAAGAAAAAAGCTTTAATATTCAAGATGAGAATTTACAAATACAACCCGATGATATTGACAAGGTAT
GA
ATGGATATTACTCCTTTTTTTAAGCTCATGGTCGATAAAGGTGCCTCAGATTTGTTTTTCAGTGTCGGGGCACCACCAAA
TATTAAAATCGAGGGCATCACATCACCTATTGGCCAGGTTCCTATCAAATCGAATCAAATGGCAGAAATTGTTTTATCTA
TTATGAATGACGCACAGCAAAAAGAATTTGAGTCTAAAATGGAACTCAATATGGCTTTTTCATTAGCTGGAGTAGGGCGT
TTCCGAATCAATTTATTCAGGCAACGTGGCGAAGTGGCTATGGTGGTGCGTTACATCAAGGGCGAAATACCTTCTATAGA
AGATTTAAATCTTCCTCAAATTTTAAAGTCTCTGGTCTTGGAGTTGCGAGGTTTAGTATTGGTTGTTGGGTCCACGGGAT
CTGGTAAATCAACAACTCTGGCCACGATGATCAACCACCGTAATGAAAATCACAGAGGGCATATTTTAACAATAGAGGAT
CCTATTGAATATATACATCAACATAAAAAATCAATAGTTGATCAACGAGAGATAGGTATTGATACTCTAAGCTATGACAA
TGCATTGAAAAACGCAATGAGAGAAGCGCCTGATGTGATATTAATTGGTGAAATTCGTGATCTTAACTCAATGAAACATG
CGATAGCTTATGCTGAAACAGGACATTTGTGCATTTCTACTTTGCATGCCAATAACGCCAATCAGGCTCTGGATAGAGTG
ATTAATTTTTTCCCCGATGAGGCAAGACAACAGATATTATTAGATTTATCTCTTAATTTAAAAGCAATCATTTCATTACG
TTTGATACCAGGAGTTGATAATCAACGTGTCGCAGCGGTGGAGATCTTGATTAACTCTCCTTACATTTCCGATTTGATTG
AAAAAGGGAAGATAGACGATATTAAAGAAGTCATGGCAAGAAGCACGGAACAAGGCATGCAGACTTTCGATCAGGCTTTA
TTTAATTTATATAAAGAAGGAAAAATTACCAAAGAAAATGCGATTAAGTATGCTGATTCAAAAAACAATGTGGGTTTACA
AATTCGATTGGGCGAAGAAAAAAGCTTTAATATTCAAGATGAGAATTTACAAATACAACCCGATGATATTGACAAGGTAT
GA
3D structure
| Source | ID | Structure |
|---|
Similar proteins
Only experimentally validated proteins are listed.
| Protein | Organism | Identities (%) | Coverage (%) | Ha-value |
|---|---|---|---|---|
| pilU | Pseudomonas stutzeri DSM 10701 |
55.085 |
94.906 |
0.523 |
| pilU | Acinetobacter baylyi ADP1 |
52.958 |
95.174 |
0.504 |
| pilU | Vibrio cholerae strain A1552 |
48 |
93.834 |
0.45 |
| pilT | Deinococcus radiodurans R1 = ATCC 13939 = DSM 20539 |
45.428 |
90.885 |
0.413 |
| pilT | Legionella pneumophila strain ERS1305867 |
42.982 |
91.689 |
0.394 |
| pilT | Legionella pneumophila strain Lp02 |
42.982 |
91.689 |
0.394 |
| pilT | Neisseria meningitidis 8013 |
42.075 |
93.029 |
0.391 |
| pilT | Neisseria gonorrhoeae MS11 |
42.075 |
93.029 |
0.391 |
| pilT | Pseudomonas aeruginosa PAK |
42.274 |
91.957 |
0.389 |
| pilT | Pseudomonas stutzeri DSM 10701 |
41.691 |
91.957 |
0.383 |
| pilT | Acinetobacter baumannii strain A118 |
42.814 |
89.544 |
0.383 |
| pilT | Acinetobacter nosocomialis M2 |
42.814 |
89.544 |
0.383 |
| pilT | Acinetobacter baumannii D1279779 |
42.814 |
89.544 |
0.383 |
| pilT | Acinetobacter baylyi ADP1 |
40.588 |
91.153 |
0.37 |
| pilT | Vibrio cholerae strain A1552 |
41.641 |
88.204 |
0.367 |
| pilT | Vibrio cholerae O1 biovar El Tor strain E7946 |
41.641 |
88.204 |
0.367 |