Detailed information NTG0519980

Bioinformatically predicted

Overview

• Name: rarA
• Type: Machinery gene
• Locus tag: K0V03_RS02970
• Genome accession: NZ_CP080508
• Coordinates: 503130..504395 (+)
• Length: 421 a.a.
• NCBI ID: WP_014480427.1
• Uniprot ID: -
• Organism: Bacillus subtilis strain HD15
• Function: homologous recombination (predicted from homology) Homologous recombination

Genomic Context

Location: 498130..509395

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
K0V03_RS02950 (K0V03_02950)	yrrB	499501..500121 (-)	621	WP_205764506.1	tetratricopeptide repeat protein	-
K0V03_RS02955 (K0V03_02955)	mnmA	500207..501322 (-)	1116	WP_014480424.1	tRNA 2-thiouridine(34) synthase MnmA	-
K0V03_RS02960 (K0V03_02960)	iscSA	501353..502492 (-)	1140	WP_041850172.1	cysteine desulfurase family protein	-
K0V03_RS02965 (K0V03_02965)	cymR	502511..502927 (-)	417	WP_003225879.1	cysteine metabolism transcriptional regulator CymR	-
K0V03_RS02970 (K0V03_02970)	rarA	503130..504395 (+)	1266	WP_014480427.1	replication-associated recombination protein A	Machinery gene
K0V03_RS02975 (K0V03_02975)	tcdA	504435..505199 (-)	765	WP_014480428.1	ThiF family adenylyltransferase	-
K0V03_RS02985 (K0V03_02985)	aspS	505534..507312 (-)	1779	WP_015714438.1	aspartate--tRNA ligase	-
K0V03_RS02990 (K0V03_02990)	hisS	507326..508600 (-)	1275	WP_070547596.1	histidine--tRNA ligase	-
K0V03_RS02995 (K0V03_02995)	yrzK	508982..509152 (-)	171	WP_004399157.1	YrzK family protein	-

Sequence

Protein

• Length: 421 a.a.
• Molecular weight: 46463.29 Da
• Isoelectric Point: 7.2043

>NTDB_id=519980 K0V03_RS02970 WP_014480427.1 503130..504395(+) (rarA) [Bacillus subtilis strain HD15]
MKPLAYRMRPTKIEDIIGQQHLVAEDKIIGRMVQAKHLSSMILYGPPGIGKTSIATAIAGSTSIAFRKLNAVINNKKDME
IVAQEAKMSGQVILILDEVHRLDKGKQDFLLPYLENGMIILIGATTANPYHAINPAIRSRTQIFELEPLTPDLIKQALER
ALHDEHRGLGTYSVSIDDQAMEHFAHGCGGDVRSALNALELAVLSTKESADGEIHITLETAEECLQKKSFSHDKDGDAHY
DVLSAFQKSIRGSDANAALHYLARLIEAGDLESIARRLLVIAYEDIGLASPQAGPRVLNAIQTAERVGFPEARIPLANAV
IELCLSPKSNSAILAIDEALADIRAGKIGDVPKHLKDAHYKGAQELGRGIDYKYPHNYDSGWVEQQYLPDSLKNKQYYKP
KQTGKFESALKQVYDKLMKRK

Nucleotide

• Length: 1266 bp

>NTDB_id=519980 K0V03_RS02970 WP_014480427.1 503130..504395(+) (rarA) [Bacillus subtilis strain HD15]
ATGAAGCCATTGGCATATCGGATGCGTCCGACAAAAATAGAGGATATTATCGGCCAGCAGCATCTGGTGGCTGAAGATAA
AATTATTGGCAGAATGGTCCAGGCAAAACATTTGTCATCCATGATTTTGTACGGGCCGCCCGGAATTGGAAAAACATCAA
TCGCAACAGCAATCGCCGGTTCAACAAGTATTGCTTTTCGAAAGCTGAATGCTGTCATTAACAATAAAAAAGATATGGAA
ATCGTAGCTCAGGAAGCCAAGATGTCCGGCCAAGTGATTTTGATTCTGGATGAAGTCCACAGGCTGGATAAAGGAAAACA
GGATTTTCTATTACCCTATTTAGAAAACGGGATGATCATTTTGATCGGAGCAACGACGGCTAACCCGTATCATGCCATTA
ATCCGGCGATCAGAAGCCGGACCCAGATTTTTGAGCTTGAACCGTTAACACCTGATCTGATTAAACAGGCACTGGAACGC
GCGCTCCATGATGAGCATCGGGGCCTTGGCACCTATTCTGTATCCATTGATGATCAGGCGATGGAGCATTTTGCCCACGG
ATGCGGAGGAGATGTCCGCTCCGCTTTAAATGCGCTTGAGCTTGCCGTGTTGTCAACGAAGGAGTCAGCAGACGGTGAAA
TTCACATTACATTAGAAACCGCGGAAGAATGCTTGCAGAAAAAAAGCTTTTCTCACGATAAAGATGGTGACGCGCATTAT
GATGTACTGTCCGCTTTTCAAAAATCGATCCGCGGCTCTGATGCCAACGCTGCTCTTCACTATTTGGCTAGATTAATTGA
AGCCGGTGATCTGGAGAGCATCGCAAGACGATTGCTTGTTATCGCCTATGAAGATATCGGTTTAGCAAGCCCGCAAGCCG
GCCCTAGAGTGCTGAACGCTATTCAGACCGCTGAGCGAGTCGGGTTTCCTGAAGCGCGAATCCCGCTGGCCAACGCAGTT
ATTGAGCTTTGCCTCTCACCGAAATCAAACTCTGCCATTCTGGCAATCGATGAGGCCCTGGCAGATATCAGAGCCGGAAA
AATTGGTGATGTCCCGAAGCATTTAAAAGACGCGCATTATAAAGGAGCTCAGGAATTAGGAAGAGGAATCGACTATAAAT
ACCCGCACAATTACGACAGCGGTTGGGTCGAACAACAATACCTCCCTGATTCTCTGAAAAATAAGCAATACTATAAGCCG
AAACAGACAGGAAAATTCGAATCCGCCTTAAAGCAGGTGTATGATAAATTAATGAAAAGAAAATAA

Domains

Predicted by InterProScan.

• AAA C-terminal domain (AAA_assoc_2) (172-251)

• MgsA AAA+ ATPase C terminal (MgsA_C) (252-417)

• Holliday junction DNA helicase RuvB P-loop domain (RuvB_N) (8-125)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
rarA	Bacillus subtilis subsp. subtilis str. 168	99.287	100	0.993