Detailed information    

insolico Bioinformatically predicted

Overview


Name   htrA   Type   Regulator
Locus tag   IGS65_RS07600 Genome accession   NZ_CP066294
Coordinates   1536760..1537968 (+) Length   402 a.a.
NCBI ID   WP_192072444.1    Uniprot ID   A0AAX1K1I7
Organism   Streptococcus mutans strain 27-3     
Function   require for competence development (predicted from homology)   
Competence regulation

Genomic Context


Location: 1531760..1542968
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  IGS65_RS07590 (IGS65_007590) - 1535068..1535730 (-) 663 WP_002262652.1 YoaK family protein -
  IGS65_RS07595 (IGS65_007595) rlmH 1536075..1536554 (-) 480 WP_002299259.1 23S rRNA (pseudouridine(1915)-N(3))-methyltransferase RlmH -
  IGS65_RS07600 (IGS65_007600) htrA 1536760..1537968 (+) 1209 WP_192072444.1 trypsin-like peptidase domain-containing protein Regulator
  IGS65_RS07605 (IGS65_007605) spo0J 1538443..1539216 (+) 774 WP_192072445.1 ParB/RepB/Spo0J family partition protein Regulator
  IGS65_RS07610 (IGS65_007610) dnaA 1539418..1540776 (+) 1359 WP_002262648.1 chromosomal replication initiator protein DnaA -
  IGS65_RS07615 (IGS65_007615) dnaN 1540932..1542068 (+) 1137 WP_168750858.1 DNA polymerase III subunit beta -
  IGS65_RS07620 (IGS65_007620) - 1542346..1542537 (+) 192 WP_002262646.1 DUF951 domain-containing protein -

Sequence


Protein


Download         Length: 402 a.a.        Molecular weight: 43085.57 Da        Isoelectric Point: 8.8092

>NTDB_id=519147 IGS65_RS07600 WP_192072444.1 1536760..1537968(+) (htrA) [Streptococcus mutans strain 27-3]
MNNTKSHPFLKWFIPFLVIFLTFILGVISTLTFNWITGNKSFSNNGKTTVSNVIYDTKSNTTKAVKNVKNTVVSVINYQK
TDNSYYNYDSGSQEKNKSEDGLGVYGEGSGVIYKKDGDSAYLVTNNHVVKDAEKLEIMMANGKKVVGKLVGSDTYSDLAV
IKISSKYVTTVAEFANSDKIKVGEPAIAIGSPLGSDYANSVTEGIVSSLSRTVTSQNENGETISTNAIQTDAAINPGNSG
GALINIKGQVIGINSSKIASSNNSNSGVAVEGMGFAIPSNDVVSIINQLEENGEVVRPALGISMANLSEASTSGRDTLKI
PSDITSGIVVLSTQSGMPADGKLKKYDVITEIDGKKVASISDLQSILYKHKKGDKIKLTFYREKDKQTVEIQLTKTSQDL
NH

Nucleotide


Download         Length: 1209 bp        

>NTDB_id=519147 IGS65_RS07600 WP_192072444.1 1536760..1537968(+) (htrA) [Streptococcus mutans strain 27-3]
GTGAATAATACGAAATCTCACCCTTTTTTAAAATGGTTTATACCTTTTTTAGTTATTTTTTTAACTTTTATTTTAGGGGT
CATATCAACACTTACCTTTAATTGGATAACTGGTAACAAATCGTTCTCTAACAATGGAAAAACAACTGTTAGTAATGTCA
TTTATGATACCAAATCTAACACTACCAAGGCTGTTAAAAATGTCAAAAATACAGTTGTATCTGTCATCAATTATCAAAAA
ACAGATAATAGTTATTACAATTATGACAGCGGTTCTCAAGAAAAAAATAAATCAGAGGATGGTCTAGGAGTCTACGGTGA
AGGTTCTGGTGTTATCTACAAAAAAGATGGCGATAGTGCTTATTTAGTCACAAACAATCATGTCGTTAAAGATGCAGAAA
AGTTAGAAATCATGATGGCTAATGGTAAAAAAGTTGTCGGTAAATTAGTAGGTTCTGATACTTATTCTGATCTGGCTGTT
ATTAAAATTTCTTCTAAGTATGTTACGACAGTTGCTGAATTTGCTAATTCGGATAAAATAAAAGTTGGAGAACCAGCAAT
CGCTATTGGTAGCCCTTTAGGCAGTGATTATGCTAATTCTGTAACAGAAGGAATTGTTTCAAGTCTCAGTCGTACAGTAA
CTTCACAAAATGAAAATGGCGAAACAATTTCAACTAATGCTATTCAAACAGACGCAGCTATTAACCCTGGTAATTCTGGT
GGCGCTTTAATTAATATCAAAGGACAAGTTATTGGTATCAATTCAAGTAAAATTGCATCAAGTAATAACTCAAATAGTGG
CGTTGCTGTTGAAGGAATGGGCTTTGCAATTCCTTCAAACGATGTTGTCTCTATTATTAATCAATTAGAAGAAAATGGTG
AAGTTGTTAGACCCGCTCTTGGTATTTCAATGGCTAATCTTAGTGAAGCTTCAACAAGTGGAAGAGATACTTTAAAAATA
CCAAGTGATATCACAAGCGGTATTGTTGTTCTTTCAACACAAAGTGGTATGCCAGCAGATGGGAAGCTGAAGAAATATGA
TGTCATTACAGAAATTGATGGGAAGAAGGTAGCGTCTATCAGCGATCTTCAAAGTATTCTTTACAAACACAAAAAGGGAG
ATAAAATTAAACTCACTTTCTATCGCGAAAAAGATAAACAAACAGTTGAGATCCAATTAACTAAAACAAGTCAAGATTTG
AATCATTAA


Secondary structure


Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure


Source ID Structure

Transmembrane helices


Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.



Visualization of predicted probability:


Similar proteins


Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  htrA Streptococcus mutans UA159

99.751

100

0.998

  htrA Streptococcus gordonii str. Challis substr. CH1

55.89

99.254

0.555

  htrA Streptococcus mitis NCTC 12261

54.43

98.259

0.535

  htrA Streptococcus pneumoniae Rx1

54.061

98.01

0.53

  htrA Streptococcus pneumoniae D39

54.061

98.01

0.53

  htrA Streptococcus pneumoniae R6

54.061

98.01

0.53

  htrA Streptococcus pneumoniae TIGR4

54.061

98.01

0.53