Detailed information    

insolico Bioinformatically predicted

Overview

Name   scnK   Type   Regulator
Locus tag   IGS65_RS02550 Genome accession   NZ_CP066294
Coordinates   504858..506165 (+) Length   435 a.a.
NCBI ID   WP_192072243.1    Uniprot ID   A0AAX1K4J7
Organism   Streptococcus mutans strain 27-3     
Function   regulate comX expression (predicted from homology)   
Competence regulation

Genomic Context

Location: 499858..511165
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  IGS65_RS02520 (IGS65_002520) - 499896..500129 (+) 234 WP_002262193.1 DUF1858 domain-containing protein -
  IGS65_RS02525 (IGS65_002525) - 500129..501493 (+) 1365 WP_002276259.1 DUF438 domain-containing protein -
  IGS65_RS02530 (IGS65_002530) - 501620..502348 (-) 729 WP_024783450.1 ABC transporter permease -
  IGS65_RS02535 (IGS65_002535) - 502345..503085 (-) 741 WP_002265501.1 ABC transporter permease -
  IGS65_RS02540 (IGS65_002540) - 503085..503993 (-) 909 WP_192072244.1 ABC transporter ATP-binding protein -
  IGS65_RS02545 (IGS65_002545) scnR 504168..504857 (+) 690 WP_002268159.1 response regulator transcription factor Regulator
  IGS65_RS02550 (IGS65_002550) scnK 504858..506165 (+) 1308 WP_192072243.1 HAMP domain-containing sensor histidine kinase Regulator
  IGS65_RS02555 (IGS65_002555) truB 506258..507139 (+) 882 WP_192072242.1 tRNA pseudouridine(55) synthase TruB -
  IGS65_RS02560 (IGS65_002560) - 507170..508090 (+) 921 WP_002262201.1 bifunctional riboflavin kinase/FAD synthetase -
  IGS65_RS02565 (IGS65_002565) spx 508151..508564 (+) 414 WP_002263835.1 transcriptional regulator Spx -
  IGS65_RS02570 (IGS65_002570) - 508557..508835 (+) 279 WP_002265496.1 UPF0223 family protein -
  IGS65_RS02575 (IGS65_002575) - 508825..509583 (+) 759 WP_002262204.1 inositol monophosphatase family protein -
  IGS65_RS02580 (IGS65_002580) - 509647..510951 (+) 1305 WP_192072241.1 RsmB/NOP family class I SAM-dependent RNA methyltransferase -

Sequence

Protein


Download         Length: 435 a.a.        Molecular weight: 50089.09 Da        Isoelectric Point: 9.6853

>NTDB_id=519113 IGS65_RS02550 WP_192072243.1 504858..506165(+) (scnK) [Streptococcus mutans strain 27-3]
MDTVKFFTKLLTKYVLLVFALIVGVIFVYGLVFLTYLNYYGKEKPELVYTKIAQSSQQDAFNISKRSQKEMDKQKTWAMV
LNQDGQIVQSYRLPQQLKRHYTNADMVKFSRWYLDDYPVFSYVRGQQILVFGYPKKYSLAKFNFYLNTQFIKNFLHLGFV
FLGIIFLFIFVLFSRSKLRIKKEIEPIVSALTFLSQGQSAALNEKGNLSEIKTALNETSHILEESNMMKEQWIRGVSHDL
RNPLMLISGYTSQLEQQYGHGKQTEQIENQIQNMKEMISNLNLSYLLDNQKRHSKFSSLDLAVVLRSVIADILNNYETVI
LHFDLPTEVVLVKGDATLLERAFRNLLLNSIKHSGSNQIDLTYQLFDNKVIIIIADKGTITAQKIVELNQKSTNYESHGM
GTVITKQIIKLHQGETVFSDNHPGLKVTIVLPCNG

Nucleotide


Download         Length: 1308 bp        

>NTDB_id=519113 IGS65_RS02550 WP_192072243.1 504858..506165(+) (scnK) [Streptococcus mutans strain 27-3]
ATGGATACCGTTAAATTTTTTACGAAGTTATTGACCAAGTATGTTCTATTAGTATTTGCCTTAATTGTAGGAGTTATTTT
TGTTTATGGCTTGGTTTTCTTAACCTATCTTAATTATTATGGAAAGGAAAAACCAGAGCTAGTTTACACCAAAATCGCTC
AATCGAGTCAACAAGATGCGTTCAATATTAGTAAAAGAAGTCAAAAAGAAATGGATAAACAAAAGACTTGGGCTATGGTA
TTAAATCAAGATGGTCAGATCGTCCAATCTTATCGTTTACCTCAACAGCTCAAAAGACATTATACCAATGCTGATATGGT
GAAATTTTCGCGCTGGTATTTAGATGATTATCCTGTTTTTTCCTATGTACGTGGTCAGCAGATTTTAGTTTTTGGCTACC
CTAAAAAGTATTCCCTAGCAAAGTTTAATTTTTATCTGAATACGCAATTTATTAAGAATTTTCTTCATTTAGGTTTTGTT
TTCTTAGGCATCATCTTTTTATTTATCTTTGTTCTTTTTAGTCGTTCAAAGCTGCGCATTAAAAAGGAAATAGAGCCGAT
TGTCTCTGCGCTCACTTTCCTGTCGCAAGGTCAAAGTGCTGCTCTTAATGAAAAAGGCAATCTTTCTGAAATTAAGACAG
CTCTCAATGAAACTTCTCATATTTTAGAAGAAAGTAATATGATGAAAGAACAGTGGATTAGAGGAGTCAGTCACGATTTG
CGCAACCCGCTGATGCTGATTTCAGGCTACACCAGTCAATTGGAACAACAATATGGTCATGGAAAGCAAACGGAGCAGAT
TGAAAATCAGATTCAAAATATGAAAGAAATGATTTCTAATCTCAATTTGAGCTACCTGTTGGATAATCAAAAGCGTCATT
CCAAATTTTCAAGCCTTGATTTAGCTGTTGTTCTGCGATCCGTAATTGCTGATATTCTAAATAATTATGAAACAGTTATA
CTTCATTTTGATTTACCTACAGAGGTGGTATTGGTAAAGGGTGATGCCACTTTATTAGAAAGGGCTTTTAGAAATCTTCT
GCTCAATAGTATTAAGCATAGTGGCTCTAATCAGATCGATTTGACTTATCAATTATTTGATAATAAAGTGATTATTATCA
TTGCAGATAAGGGAACTATTACAGCTCAGAAAATTGTAGAACTAAATCAAAAATCAACTAATTATGAGTCGCATGGCATG
GGCACCGTTATCACTAAGCAAATCATAAAACTTCATCAAGGTGAGACTGTCTTTTCAGATAATCATCCAGGTTTGAAAGT
GACGATTGTTTTGCCCTGTAACGGATGA

Domains

Predicted by InterproScan.

His Kinase A (phospho-acceptor) domain (HisKA)

(228-282)

Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase (HATPase_c)

(334-432)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  scnK Streptococcus mutans UA159

99.076

99.54

0.986