Detailed information NTG0518690

Bioinformatically predicted

Overview

• Name: xcpW
• Type: Machinery gene
• Locus tag: JCR18_RS08550
• Genome accession: NZ_CP066232
• Coordinates: 1772087..1772788 (+)
• Length: 233 a.a.
• NCBI ID: WP_000594589.1
• Uniprot ID: A0A9P3CZ31
• Organism: Acinetobacter baumannii strain G20AB010
• Function: pseudopilus assembly (predicted from homology) DNA binding and uptake

Genomic Context

Location: 1767087..1777788

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
JCR18_RS08515 (JCR18_08515)	kdsB	1767610..1768371 (+)	762	WP_000680697.1	3-deoxy-manno-octulosonate cytidylyltransferase	-
JCR18_RS08520 (JCR18_08520)	-	1768383..1769363 (+)	981	WP_001075411.1	DNA polymerase III subunit delta'	-
JCR18_RS08525 (JCR18_08525)	-	1769375..1769716 (+)	342	WP_001183024.1	PilZ domain-containing protein	-
JCR18_RS08530 (JCR18_08530)	-	1769734..1770507 (+)	774	WP_000497298.1	TatD family hydrolase	-
JCR18_RS08535 (JCR18_08535)	-	1770545..1771153 (+)	609	WP_000375838.1	TetR/AcrR family transcriptional regulator	-
JCR18_RS08540 (JCR18_08540)	-	1771163..1771717 (+)	555	WP_000841373.1	type II secretion system protein	-
JCR18_RS08545 (JCR18_08545)	xcpV	1771707..1772087 (+)	381	WP_000836911.1	type II secretion system minor pseudopilin GspI	Machinery gene
JCR18_RS08550 (JCR18_08550)	xcpW	1772087..1772788 (+)	702	WP_000594589.1	type II secretion system minor pseudopilin GspJ	Machinery gene
JCR18_RS08555 (JCR18_08555)	gspK	1772788..1773747 (+)	960	WP_000301476.1	type II secretion system minor pseudopilin GspK	-
JCR18_RS08560 (JCR18_08560)	-	1773978..1774574 (+)	597	WP_000908452.1	6-carboxytetrahydropterin synthase	-
JCR18_RS08565 (JCR18_08565)	ung	1774625..1775338 (+)	714	WP_001177528.1	uracil-DNA glycosylase	-
JCR18_RS08570 (JCR18_08570)	-	1775335..1776459 (+)	1125	WP_001983908.1	enoyl-CoA hydratase/isomerase family protein	-
JCR18_RS08575 (JCR18_08575)	tadA	1776466..1776969 (+)	504	WP_000033178.1	tRNA adenosine(34) deaminase TadA	-
JCR18_RS08580 (JCR18_08580)	-	1777039..1777482 (+)	444	WP_001246675.1	SRPBCC family protein	-

Sequence

Protein

• Length: 233 a.a.
• Molecular weight: 26639.58 Da
• Isoelectric Point: 9.3468

>NTDB_id=518690 JCR18_RS08550 WP_000594589.1 1772087..1772788(+) (xcpW) [Acinetobacter baumannii strain G20AB010]
MIKNKYIHIRSIDSRLAARSSSARLTRASGFTLVELLVAIAIFAVLSLLGWKIFDYLLKVRDRNAEHEVHLFELQDAYQQ
ILRDTLQIIPLSANQGGQLHPALEIDNQILRFSKAGVTDPLKQGLSPFERIEYRYDADQKKLYRLKYTNLNTSNREQPLS
STLLSQVDQYQIMVLTPQEVTKWPEVNIDPTKPNELKKLPKGIKIQLTVAGVNYEWIYSLNQGDLSLSQEGNS

Nucleotide

• Length: 702 bp

>NTDB_id=518690 JCR18_RS08550 WP_000594589.1 1772087..1772788(+) (xcpW) [Acinetobacter baumannii strain G20AB010]
ATGATAAAAAATAAATATATTCACATCCGAAGCATTGATTCTCGCCTTGCAGCACGATCGAGCAGTGCTCGATTAACTCG
CGCCTCAGGATTTACTTTGGTTGAATTGTTAGTCGCGATCGCTATCTTTGCGGTTTTATCTTTATTGGGGTGGAAAATTT
TCGATTACTTGCTCAAAGTTCGTGATCGTAATGCCGAACATGAAGTGCATTTATTTGAATTACAAGATGCTTATCAACAA
ATTCTTCGTGATACTTTGCAGATTATCCCTTTATCCGCAAACCAAGGTGGTCAACTTCATCCAGCTTTAGAAATCGATAA
TCAAATTTTACGTTTTAGCAAAGCAGGCGTAACGGATCCTTTAAAACAAGGCTTATCACCATTTGAACGAATTGAATATC
GTTATGATGCAGACCAAAAAAAATTATATCGTCTTAAATATACAAATTTGAATACTTCGAACAGAGAGCAACCTTTATCG
AGTACTTTGTTAAGTCAAGTCGACCAATATCAGATTATGGTTTTGACTCCGCAAGAAGTCACAAAATGGCCCGAGGTTAA
TATTGATCCAACGAAACCTAATGAGTTAAAAAAATTACCGAAAGGGATAAAAATCCAACTTACAGTCGCTGGTGTAAATT
ATGAGTGGATTTATAGCTTAAATCAGGGTGACTTATCGCTTTCGCAGGAAGGTAATTCATAA

Domains

Predicted by InterproScan.

• Prokaryotic N-terminal methylation motif (N_methyl) (27-49)

• Type II secretion system (T2SS), protein J (T2SSJ) (83-212)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
xcpW	Acinetobacter baumannii D1279779	99.571	100	0.996