Detailed information NTG0518607

Bioinformatically predicted

Overview

• Name: recD2
• Type: Machinery gene
• Locus tag: I5435_RS15485
• Genome accession: NZ_CP066226
• Coordinates: 3168271..3170715 (-)
• Length: 814 a.a.
• NCBI ID: WP_337982557.1
• Uniprot ID: -
• Organism: Lysinibacillus sp. C5.1
• Function: homologous recombination (predicted from homology) Homologous recombination

Genomic Context

Location: 3163271..3175715

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
I5435_RS15470	hpaB	3164442..3165878 (-)	1437	WP_024363119.1	4-hydroxyphenylacetate 3-monooxygenase, oxygenase component	-
I5435_RS15475	-	3166229..3166417 (+)	189	WP_024363120.1	hypothetical protein	-
I5435_RS15480	-	3166533..3168242 (-)	1710	WP_337982556.1	polysaccharide deacetylase family protein	-
I5435_RS15485	recD2	3168271..3170715 (-)	2445	WP_337982557.1	ATP-dependent RecD-like DNA helicase	Machinery gene
I5435_RS15490	hisA	3170909..3171676 (+)	768	WP_024363123.1	phosphoribosylformimino-5-aminoimidazole carboxamide ribotide isomerase	-
I5435_RS15495	-	3171673..3171960 (+)	288	WP_024363124.1	hypothetical protein	-
I5435_RS15500	-	3172209..3172949 (+)	741	WP_024363125.1	GTP pyrophosphokinase family protein	-
I5435_RS15505	-	3173194..3173853 (-)	660	WP_024363126.1	tetratricopeptide repeat protein	-
I5435_RS15510	mnmA	3173967..3175091 (-)	1125	WP_024363127.1	tRNA 2-thiouridine(34) synthase MnmA	-

Sequence

Protein

• Length: 814 a.a.
• Molecular weight: 91324.44 Da
• Isoelectric Point: 4.8701

>NTDB_id=518607 I5435_RS15485 WP_337982557.1 3168271..3170715(-) (recD2) [Lysinibacillus sp. C5.1]
MTENLDLFELNKLFILGRPIVSIFHNVQNMYSIVRVKIQETNLQYEDKEIIVVGYFPQLQMDEQYRFTGTMRQHPKYGVQ
FQVETFTKEVPATEQGIVHYLSSDLFVGIGKKTAETIVEKLGPNTIRLILEDPNVLDGVPRLSAEKKEVIHRTIEQNLGL
ERVMIQLNEWGFGPQLGMKIYQTYRTETIDFLTENPYRLIEDVDGVGFFRADELGAKLGITGNHPDRIKAAILHILNTAA
LSDGHVFLDAEHVLPQVKDMLEQSQRQEIPYEAISKACIDLREENKIYGEETRLYLPSLYFSEIGIASKIIALTERNSQA
KHFSKDEIRKAIGETEALLSVTYAETQAFAIEQALNSAVMILTGGPGTGKTTVVRGIVEVYAKLHGLSLNPKEYAQKEEP
FPIILCAPTGRAAKRLAESTELPAMTIHRLLGFTGQEKEEETEREVTGKLIIVDEMSMVDTWLAHQLLKSLHEDVQVVFV
GDQDQLPPVGPGQVLKDLLASQQIPTVELTDVYRQAEGSTIIELAHQIKRGTIPNDLTMKTSDRSFIKASSEQVANVVTQ
VVKSAVAKGQEIRNIQVLAPMYKGPAGIDNLNKLIQALVNPNDTGTRKELVFGDVTYRIKDKVLQLVNQPESNVFNGDMG
EVISIIKAKETVEKQDLLVVSFDGIEVTYQRSDLNQLTLAYCCSIHKSQGSEFQTVIMPVVRGYSKMLRRNLLYTGITRA
KNFLILCGEPDVLASGLQRTDDLQRFTSLRARLNPMEASNEVILVEETQTQQNEENNQQEDATTVLQLTVETLPSIHPMI
GMDGISPYDFMDES

Nucleotide

• Length: 2445 bp

>NTDB_id=518607 I5435_RS15485 WP_337982557.1 3168271..3170715(-) (recD2) [Lysinibacillus sp. C5.1]
ATGACAGAAAATCTAGATTTATTTGAACTGAATAAGCTATTTATTCTTGGACGTCCGATTGTCTCTATTTTCCATAATGT
TCAAAATATGTATTCTATTGTGCGCGTGAAAATTCAAGAAACAAATTTGCAATATGAAGATAAGGAAATTATTGTCGTTG
GTTATTTCCCACAATTGCAAATGGACGAACAATATCGTTTTACAGGAACGATGAGACAGCATCCAAAATATGGTGTACAA
TTTCAAGTTGAAACCTTTACAAAAGAAGTGCCCGCAACTGAGCAAGGTATCGTTCATTATTTATCGAGTGATTTATTTGT
TGGTATTGGAAAAAAAACGGCTGAAACAATTGTAGAGAAACTTGGACCCAATACAATCCGTCTTATATTAGAAGACCCGA
ATGTCCTTGATGGTGTACCACGACTATCTGCTGAAAAAAAGGAAGTTATTCATCGTACCATTGAGCAAAATCTTGGATTG
GAACGGGTTATGATTCAGTTAAATGAATGGGGATTTGGCCCGCAGCTCGGTATGAAAATATATCAAACATATCGTACAGA
GACGATTGATTTTTTAACTGAAAACCCTTATCGACTCATTGAAGATGTGGACGGTGTCGGTTTCTTTCGGGCAGATGAGC
TTGGTGCAAAATTAGGTATTACAGGCAATCATCCTGACCGTATTAAGGCGGCTATTTTACATATTCTAAATACAGCAGCG
TTATCGGATGGTCATGTATTTTTAGATGCGGAACATGTATTACCACAAGTGAAAGATATGCTGGAGCAAAGTCAACGCCA
AGAAATACCATACGAAGCAATTTCCAAGGCATGTATCGATTTGCGTGAGGAAAATAAAATCTATGGTGAAGAAACGAGAC
TATATTTGCCATCTCTATATTTTTCGGAGATTGGTATTGCCTCAAAAATAATTGCGCTAACGGAACGCAATAGTCAAGCG
AAGCATTTTAGTAAAGATGAAATTCGCAAGGCAATCGGCGAAACAGAAGCATTGTTAAGTGTCACATATGCAGAAACACA
AGCTTTTGCAATTGAACAAGCACTTAATTCAGCTGTCATGATTTTAACAGGTGGTCCTGGTACAGGAAAAACGACGGTTG
TTAGGGGCATTGTTGAAGTATATGCCAAACTTCACGGTCTTTCACTAAATCCAAAGGAATATGCGCAAAAAGAAGAGCCG
TTCCCTATTATTTTATGTGCACCAACAGGTCGTGCAGCTAAACGTCTAGCTGAGTCTACGGAACTACCTGCGATGACCAT
CCACCGCTTATTAGGCTTTACAGGTCAGGAGAAAGAGGAAGAAACGGAGCGAGAGGTTACTGGAAAACTGATCATTGTCG
ATGAAATGTCCATGGTAGATACATGGCTTGCCCATCAATTATTAAAATCATTACATGAGGATGTGCAAGTTGTTTTTGTT
GGCGATCAAGATCAGCTACCGCCAGTAGGTCCAGGACAAGTGCTCAAAGATTTACTTGCTTCGCAACAAATACCAACTGT
TGAACTGACAGATGTTTATCGTCAGGCGGAAGGTTCAACCATTATTGAACTCGCCCATCAGATTAAACGTGGTACAATTC
CAAATGATCTAACGATGAAAACATCGGATCGTTCCTTTATTAAAGCTTCTTCAGAGCAAGTGGCAAATGTTGTAACACAA
GTTGTGAAAAGTGCAGTAGCAAAAGGGCAAGAAATCCGAAATATCCAAGTTTTAGCACCGATGTATAAAGGACCAGCCGG
AATTGATAACTTAAATAAATTGATTCAAGCGCTTGTCAATCCGAATGATACTGGTACAAGAAAGGAACTTGTCTTTGGTG
ATGTAACGTATCGCATAAAGGATAAAGTATTACAGCTTGTAAACCAGCCAGAAAGCAATGTTTTTAATGGGGATATGGGT
GAAGTCATTAGTATTATTAAAGCAAAGGAAACGGTGGAGAAGCAGGATTTACTTGTCGTGTCTTTTGATGGAATTGAAGT
AACTTATCAGCGCAGCGATCTTAATCAATTAACATTGGCTTATTGTTGCTCCATTCATAAATCACAAGGTTCAGAATTTC
AAACGGTGATTATGCCAGTGGTGCGTGGCTATTCGAAAATGCTACGTCGTAATTTATTATATACTGGTATTACACGTGCG
AAAAATTTCTTAATTTTATGTGGTGAACCAGATGTGCTAGCTAGCGGTTTACAACGAACAGACGATTTACAACGCTTCAC
GTCTCTGCGCGCACGACTTAACCCAATGGAAGCATCTAATGAGGTTATATTAGTGGAGGAGACGCAAACGCAACAAAATG
AAGAGAACAATCAACAAGAGGATGCTACGACTGTGCTACAGCTAACGGTCGAAACCTTACCATCCATCCATCCAATGATT
GGAATGGATGGCATATCTCCATATGATTTTATGGATGAATCATAA

Domains

Predicted by InterproScan.

• UvrD-like helicase C-terminal domain (UvrD_C_2) (680-727)

• Helix-hairpin-helix containing domain (HHH_RecD2) (159-247)

• ATP-dependent RecD-like DNA helicase SH3 domain (SH3_13) (591-661)

• AAA domain (AAA_30) (343-550)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
recD2	Bacillus subtilis subsp. subtilis str. 168	53.015	97.789	0.518