Detailed information NTG0051844

Bioinformatically predicted

Overview

• Name: comR/comR2
• Type: Regulator
• Locus tag: SCIM_RS00075
• Genome accession: NC_018073
• Coordinates: 18740..19213 (+)
• Length: 157 a.a.
• NCBI ID: WP_014829546.1
• Uniprot ID: -
• Organism: Streptococcus intermedius JTH08
• Function: activate transcription of late competence genes (predicted from homology) Competence regulation

Genomic Context

Location: 13740..24213

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
SCIM_RS00070 (SCIM_0012)	-	15657..18419 (+)	2763	WP_003075594.1	sialidase domain-containing protein	-
SCIM_RS00075 (SCIM_0013)	comR/comR2	18740..19213 (+)	474	WP_014829546.1	transcriptional regulator	Regulator

Sequence

Protein

• Length: 157 a.a.
• Molecular weight: 19400.38 Da
• Isoelectric Point: 8.6124

>NTDB_id=51844 SCIM_RS00075 WP_014829546.1 18740..19213(+) (comR/comR2) [Streptococcus intermedius JTH08]
MDFKELYEKVRGIVLKCRREYYVHLWELSDWDQEGMIVLYELVSRHPYLVEEEAHLYVYYKTKFRNHIKDILRKQESQKR
KLDRQVYEEVSEIGHKLSLKGLYLDELVILRDQLKSYQKQLSPAKQEQYERLLADERFKGRQAMLRELRTYLKDYEM

Nucleotide

• Length: 474 bp

>NTDB_id=51844 SCIM_RS00075 WP_014829546.1 18740..19213(+) (comR/comR2) [Streptococcus intermedius JTH08]
ATGGATTTCAAGGAGTTATATGAGAAAGTAAGGGGAATTGTGCTGAAGTGTCGGCGGGAATATTATGTCCATCTGTGGGA
GCTAAGCGATTGGGATCAAGAAGGGATGATAGTCTTGTATGAGTTGGTAAGTCGCCACCCCTATTTGGTAGAGGAAGAAG
CCCATCTCTATGTCTACTATAAGACAAAGTTTCGGAATCACATAAAGGATATTCTGCGCAAACAAGAAAGTCAAAAGCGC
AAACTGGATCGCCAAGTGTATGAAGAGGTAAGTGAGATTGGGCACAAGTTAAGTCTGAAAGGTCTGTATCTAGACGAGTT
GGTAATACTCCGCGATCAATTAAAGTCCTATCAAAAGCAACTGAGTCCCGCCAAGCAAGAGCAGTATGAGCGGTTACTGG
CAGATGAAAGGTTCAAAGGCCGCCAAGCGATGCTTCGAGAGTTACGAACCTACTTAAAAGACTATGAGATGTAG

Domains

No domain identified.

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
comR/comR2	Streptococcus gordonii str. Challis substr. CH1	60.645	98.726	0.599
comR/comR1	Streptococcus gordonii str. Challis substr. CH1	60.645	98.726	0.599
comX/sigX/comX2/sigX2	Streptococcus mitis NCTC 12261	57.419	98.726	0.567
comX/sigX/comX1/sigX1	Streptococcus mitis NCTC 12261	56.129	98.726	0.554
comX/sigX/comX2/sigX2	Streptococcus mitis SK321	55.484	98.726	0.548
comX/comX2	Streptococcus pneumoniae D39	54.839	98.726	0.541
comX/comX1	Streptococcus pneumoniae D39	54.839	98.726	0.541
comX/comX1	Streptococcus pneumoniae R6	54.839	98.726	0.541
comX/comX2	Streptococcus pneumoniae R6	54.839	98.726	0.541
comX/comX2	Streptococcus pneumoniae Rx1	54.839	98.726	0.541
comX/comX1	Streptococcus pneumoniae Rx1	54.839	98.726	0.541
comX/sigX/comX1/sigX1	Streptococcus mitis SK321	54.839	98.726	0.541
comX/comX2	Streptococcus pneumoniae TIGR4	54.194	98.726	0.535
comX/comX1	Streptococcus pneumoniae TIGR4	54.194	98.726	0.535
comX/sigX	Streptococcus mutans UA159	50.649	98.089	0.497
comX/sigX	Streptococcus suis isolate S10	48.387	98.726	0.478
comX/sigX	Streptococcus suis D9	48.387	98.726	0.478
comX/sigX	Streptococcus suis P1/7	48.387	98.726	0.478
comX/sigX/comX1/sigX1	Streptococcus pyogenes JRS4	43.871	98.726	0.433
comX/sigX/comX1/sigX1	Streptococcus pyogenes MGAS315	43.871	98.726	0.433
comX/sigX/comX2/sigX2	Streptococcus pyogenes JRS4	43.871	98.726	0.433
comX/sigX/comX2/sigX2	Streptococcus pyogenes MGAS315	43.871	98.726	0.433
comX/sigX/comX2/sigX2	Streptococcus pyogenes MGAS8232	43.871	98.726	0.433
comX/sigX/comX1/sigX1	Streptococcus pyogenes MGAS8232	43.871	98.726	0.433
comX	Streptococcus salivarius SK126	42.208	98.089	0.414
comX	Streptococcus thermophilus LMD-9	41.558	98.089	0.408
comX	Streptococcus thermophilus LMG 18311	41.558	98.089	0.408
comX/sigX	Streptococcus salivarius strain HSISS4	41.558	98.089	0.408
comX/sigX	Streptococcus infantarius subsp. infantarius ATCC BAA-102	40.385	99.363	0.401
comX	Streptococcus sobrinus strain NIDR 6715-7	37.013	98.089	0.363